RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 PTPREP23469 700 aa19.97■□□□□ 0.79
SHANK1-202ENST00000359082 ANKRD20A4Q4UJ75 823 aa19.97■□□□□ 0.79
SHANK1-202ENST00000359082 ANKRD20A8PQ5CZ79 823 aa19.97■□□□□ 0.79
SHANK1-202ENST00000359082 ANKRD20A2Q5SQ80 823 aa19.97■□□□□ 0.79
SHANK1-202ENST00000359082 ANKRD20A1Q5TYW2 823 aa19.97■□□□□ 0.79
SHANK1-202ENST00000359082 INTS9Q9NV88 658 aaKnown RBP19.97■□□□□ 0.79
SHANK1-202ENST00000359082 CFAP74Q9C0B2 1584 aa19.97■□□□□ 0.79
SHANK1-202ENST00000359082 CLRN2A0PK11 232 aa19.97■□□□□ 0.79
SHANK1-202ENST00000359082 RBM6P78332 1123 aaKnown RBP19.97■□□□□ 0.79
SHANK1-202ENST00000359082 AOC3Q16853 763 aa19.97■□□□□ 0.79
SHANK1-202ENST00000359082 CLIC2O15247 247 aa19.96■□□□□ 0.79
SHANK1-202ENST00000359082 PCDHA4Q9UN74 947 aa19.96■□□□□ 0.79
SHANK1-202ENST00000359082 SLC8A1P32418 973 aa19.96■□□□□ 0.79
SHANK1-202ENST00000359082 PSMC2P35998 433 aaKnown RBP19.96■□□□□ 0.79
SHANK1-202ENST00000359082 ARPP19P56211 112 aa19.96■□□□□ 0.79
SHANK1-202ENST00000359082 PPP1R16BQ96T49 567 aa19.96■□□□□ 0.79
SHANK1-202ENST00000359082 SSH2Q76I76 1423 aa19.96■□□□□ 0.79
SHANK1-202ENST00000359082 GOLGA8SH3BPF8 625 aa19.96■□□□□ 0.79
SHANK1-202ENST00000359082 ZBTB33Q86T24 672 aa19.96■□□□□ 0.79
SHANK1-202ENST00000359082 AFPP02771 609 aaKnown RBP19.96■□□□□ 0.79
SHANK1-202ENST00000359082 TMTC3Q6ZXV5 915 aa19.96■□□□□ 0.79
SHANK1-202ENST00000359082 EAF2Q96CJ1 260 aaPredicted RBP19.96■□□□□ 0.79
SHANK1-202ENST00000359082 KMT5AQ9NQR1 393 aa19.96■□□□□ 0.79
SHANK1-202ENST00000359082 FNDC3AQ9Y2H6 1198 aaKnown RBP19.96■□□□□ 0.79
SHANK1-202ENST00000359082 MYO1FO00160 1098 aa19.96■□□□□ 0.79
SHANK1-202ENST00000359082 PKP1Q13835 747 aa19.96■□□□□ 0.79
SHANK1-202ENST00000359082 MIS18BP1Q6P0N0 1132 aa19.96■□□□□ 0.79
SHANK1-202ENST00000359082 NR2F2P24468 414 aa19.96■□□□□ 0.79
SHANK1-202ENST00000359082 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.96■□□□□ 0.79
SHANK1-202ENST00000359082 TYW5A2RUC4 315 aaKnown RBP19.95■□□□□ 0.78
SHANK1-202ENST00000359082 LRRN2O75325 713 aa19.95■□□□□ 0.78
SHANK1-202ENST00000359082 SUN1O94901 812 aa19.95■□□□□ 0.78
SHANK1-202ENST00000359082 ADORA1P30542 326 aa19.95■□□□□ 0.78
SHANK1-202ENST00000359082 ZKSCAN8Q15776 578 aaPredicted RBP19.95■□□□□ 0.78
SHANK1-202ENST00000359082 METTL23Q86XA0 190 aa19.95■□□□□ 0.78
SHANK1-202ENST00000359082 LARP4BQ92615 738 aaKnown RBP19.95■□□□□ 0.78
SHANK1-202ENST00000359082 IRAK4Q9NWZ3 460 aa19.95■□□□□ 0.78
SHANK1-202ENST00000359082 KIF24Q5T7B8 1368 aa19.95■□□□□ 0.78
SHANK1-202ENST00000359082 LMNB2Q03252 620 aa19.95■□□□□ 0.78
SHANK1-202ENST00000359082 DPP9Q86TI2 863 aa19.95■□□□□ 0.78
SHANK1-202ENST00000359082 OLA1Q9NTK5 396 aaKnown RBP19.95■□□□□ 0.78
SHANK1-202ENST00000359082 EIF3CLB5ME19 914 aaKnown RBP19.95■□□□□ 0.78
SHANK1-202ENST00000359082 SGO2Q562F6 1265 aa19.95■□□□□ 0.78
SHANK1-202ENST00000359082 EIF3CQ99613 913 aaKnown RBP19.95■□□□□ 0.78
SHANK1-202ENST00000359082 MEIS1O00470 390 aa19.95■□□□□ 0.78
SHANK1-202ENST00000359082 MOCS3O95396 460 aa19.95■□□□□ 0.78
SHANK1-202ENST00000359082 RPSAP08865 295 aaKnown RBP19.95■□□□□ 0.78
SHANK1-202ENST00000359082 ABI1Q8IZP0 508 aa19.95■□□□□ 0.78
SHANK1-202ENST00000359082 TRIM4Q9C037 500 aa19.95■□□□□ 0.78
SHANK1-202ENST00000359082 LLGL1Q15334 1064 aa19.95■□□□□ 0.78
SHANK1-202ENST00000359082 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.95■□□□□ 0.78
SHANK1-202ENST00000359082 DARS2Q6PI48 645 aaKnown RBP19.95■□□□□ 0.78
SHANK1-202ENST00000359082 CCDC197Q8NCU1 140 aa19.95■□□□□ 0.78
SHANK1-202ENST00000359082 EPB41L5Q9HCM4 733 aa19.95■□□□□ 0.78
SHANK1-202ENST00000359082 FOXD4Q12950 439 aaPredicted RBP19.94■□□□□ 0.78
SHANK1-202ENST00000359082 PPWD1Q96BP3 646 aaKnown RBP19.94■□□□□ 0.78
SHANK1-202ENST00000359082 GREM2Q9H772 168 aa19.94■□□□□ 0.78
SHANK1-202ENST00000359082 PPEF1O14829 653 aaPredicted RBP19.94■□□□□ 0.78
SHANK1-202ENST00000359082 PEX19P40855 299 aa19.94■□□□□ 0.78
SHANK1-202ENST00000359082 MSH2P43246 934 aa19.94■□□□□ 0.78
SHANK1-202ENST00000359082 RSRC2Q7L4I2 434 aaKnown RBP19.94■□□□□ 0.78
SHANK1-202ENST00000359082 KCTD6Q8NC69 237 aa19.94■□□□□ 0.78
SHANK1-202ENST00000359082 ACCSQ96QU6 501 aa19.94■□□□□ 0.78
SHANK1-202ENST00000359082 ANLNQ9NQW6 1124 aa19.94■□□□□ 0.78
SHANK1-202ENST00000359082 ORC6Q9Y5N6 252 aa19.94■□□□□ 0.78
SHANK1-202ENST00000359082 APOEP02649 317 aa19.94■□□□□ 0.78
SHANK1-202ENST00000359082 TRIP13Q15645 432 aaPredicted RBP19.94■□□□□ 0.78
SHANK1-202ENST00000359082 SULF1Q8IWU6 871 aa19.94■□□□□ 0.78
SHANK1-202ENST00000359082 DNAAF3Q8N9W5 541 aa19.94■□□□□ 0.78
SHANK1-202ENST00000359082 FMNL1O95466 1100 aaPredicted RBP19.94■□□□□ 0.78
SHANK1-202ENST00000359082 SLC16A2P36021 539 aa19.94■□□□□ 0.78
SHANK1-202ENST00000359082 IFT88Q13099 833 aa19.94■□□□□ 0.78
SHANK1-202ENST00000359082 CYP4F22Q6NT55 531 aa19.94■□□□□ 0.78
SHANK1-202ENST00000359082 DPY19L2Q6NUT2 758 aa19.94■□□□□ 0.78
SHANK1-202ENST00000359082 SPZ1Q9BXG8 430 aa19.94■□□□□ 0.78
SHANK1-202ENST00000359082 NRBP1Q9UHY1 535 aa19.94■□□□□ 0.78
SHANK1-202ENST00000359082 LRFN2Q9ULH4 789 aa19.94■□□□□ 0.78
SHANK1-202ENST00000359082 PYCARDQ9ULZ3 195 aa19.94■□□□□ 0.78
SHANK1-202ENST00000359082 BPIFB4P59827 614 aa19.93■□□□□ 0.78
SHANK1-202ENST00000359082 THOC5Q13769 683 aaKnown RBP19.93■□□□□ 0.78
SHANK1-202ENST00000359082 RASIP1Q5U651 963 aa19.93■□□□□ 0.78
SHANK1-202ENST00000359082 BBS5Q8N3I7 341 aa19.93■□□□□ 0.78
SHANK1-202ENST00000359082 GDAP1Q8TB36 358 aa19.93■□□□□ 0.78
SHANK1-202ENST00000359082 MED4Q9NPJ6 270 aa19.93■□□□□ 0.78
SHANK1-202ENST00000359082 LUC7L3O95232 432 aaKnown RBP19.93■□□□□ 0.78
SHANK1-202ENST00000359082 SCYL3Q8IZE3 742 aa19.93■□□□□ 0.78
SHANK1-202ENST00000359082 FAM149B1Q96BN6 582 aa19.93■□□□□ 0.78
SHANK1-202ENST00000359082 ATP8A1Q9Y2Q0 1164 aa19.93■□□□□ 0.78
SHANK1-202ENST00000359082 PPP1R12AO14974 1030 aaPredicted RBP19.93■□□□□ 0.78
SHANK1-202ENST00000359082 TOM1L1O75674 476 aa19.93■□□□□ 0.78
SHANK1-202ENST00000359082 HEXIM1O94992 359 aaKnown RBP19.93■□□□□ 0.78
SHANK1-202ENST00000359082 CXCR5P32302 372 aa19.93■□□□□ 0.78
SHANK1-202ENST00000359082 PHKA1P46020 1223 aa19.93■□□□□ 0.78
SHANK1-202ENST00000359082 GRAMD1CQ8IYS0 662 aa19.93■□□□□ 0.78
SHANK1-202ENST00000359082 FAM133AQ8N9E0 248 aa19.93■□□□□ 0.78
SHANK1-202ENST00000359082 GOLGA8QA0A0J9YX86 632 aa19.93■□□□□ 0.78
SHANK1-202ENST00000359082 GOLGA8OA6NCC3 632 aa19.93■□□□□ 0.78
SHANK1-202ENST00000359082 GOLGA8NF8WBI6 632 aa19.93■□□□□ 0.78
SHANK1-202ENST00000359082 FAM133BQ5BKY9 247 aaKnown RBP19.93■□□□□ 0.78
SHANK1-202ENST00000359082 ARHGEF18Q6ZSZ5 1173 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms