RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 USP17L17D6RBQ6 530 aa16.66■□□□□ 0.26
GABPB1-202ENST00000359031 USP17L19D6RCP7 530 aa16.66■□□□□ 0.26
GABPB1-202ENST00000359031 USP17L20D6RJB6 530 aa16.66■□□□□ 0.26
GABPB1-202ENST00000359031 MARCH6O60337 910 aa16.66■□□□□ 0.26
GABPB1-202ENST00000359031 RAD17O75943 681 aa16.66■□□□□ 0.26
GABPB1-202ENST00000359031 FOSP01100 380 aaPredicted RBP16.66■□□□□ 0.26
GABPB1-202ENST00000359031 ETF1P62495 437 aaKnown RBP16.66■□□□□ 0.26
GABPB1-202ENST00000359031 JAG1P78504 1218 aa16.66■□□□□ 0.26
GABPB1-202ENST00000359031 RBL2Q08999 1139 aa16.66■□□□□ 0.26
GABPB1-202ENST00000359031 USP17L24Q0WX57 530 aa16.66■□□□□ 0.26
GABPB1-202ENST00000359031 IKQ13123 557 aaPredicted RBP16.66■□□□□ 0.26
GABPB1-202ENST00000359031 MCM6Q14566 821 aa16.66■□□□□ 0.26
GABPB1-202ENST00000359031 RRP1BQ14684 758 aaKnown RBP16.66■□□□□ 0.26
GABPB1-202ENST00000359031 USP17L6PQ6QN14 398 aa16.66■□□□□ 0.26
GABPB1-202ENST00000359031 IRF2BP1Q8IU81 584 aa16.66■□□□□ 0.26
GABPB1-202ENST00000359031 NIM1KQ8IY84 436 aa16.66■□□□□ 0.26
GABPB1-202ENST00000359031 AGBL3Q8NEM8 1001 aa16.66■□□□□ 0.26
GABPB1-202ENST00000359031 NT5C3AQ9H0P0 336 aa16.66■□□□□ 0.26
GABPB1-202ENST00000359031 KCNMB3Q9NPA1 279 aa16.66■□□□□ 0.26
GABPB1-202ENST00000359031 ZNF277Q9NRM2 450 aaPredicted RBP16.66■□□□□ 0.26
GABPB1-202ENST00000359031 SBF1O95248 1867 aa16.65■□□□□ 0.26
GABPB1-202ENST00000359031 A0A1W2PQC6 194 aa16.65■□□□□ 0.26
GABPB1-202ENST00000359031 CLRN2A0PK11 232 aa16.65■□□□□ 0.26
GABPB1-202ENST00000359031 MYMKA6NI61 221 aa16.65■□□□□ 0.26
GABPB1-202ENST00000359031 MEIS2O14770 477 aa16.65■□□□□ 0.26
GABPB1-202ENST00000359031 GYPCP04921 128 aa16.65■□□□□ 0.26
GABPB1-202ENST00000359031 PMS1P54277 932 aaKnown RBP16.65■□□□□ 0.26
GABPB1-202ENST00000359031 SLFN12Q8IYM2 578 aa16.65■□□□□ 0.26
GABPB1-202ENST00000359031 CRYGNQ8WXF5 182 aa16.65■□□□□ 0.26
GABPB1-202ENST00000359031 NUP88Q99567 741 aaPredicted RBP16.65■□□□□ 0.26
GABPB1-202ENST00000359031 VPS16Q9H269 839 aa16.65■□□□□ 0.26
GABPB1-202ENST00000359031 GOPCQ9HD26 462 aa16.65■□□□□ 0.26
GABPB1-202ENST00000359031 ZNRF3Q9ULT6 936 aa16.65■□□□□ 0.26
GABPB1-202ENST00000359031 PCDHA12Q9UN75 941 aa16.65■□□□□ 0.26
GABPB1-202ENST00000359031 FER1L6Q2WGJ9 1857 aa16.65■□□□□ 0.26
GABPB1-202ENST00000359031 ATAD5Q96QE3 1844 aa16.64■□□□□ 0.25
GABPB1-202ENST00000359031 A0A1W2PRG0 241 aa16.64■□□□□ 0.25
GABPB1-202ENST00000359031 TBX3O15119 743 aa16.64■□□□□ 0.25
GABPB1-202ENST00000359031 TBC1D12O60347 775 aa16.64■□□□□ 0.25
GABPB1-202ENST00000359031 RBM10P98175 930 aaKnown RBP16.64■□□□□ 0.25
GABPB1-202ENST00000359031 STK4Q13043 487 aa16.64■□□□□ 0.25
GABPB1-202ENST00000359031 SYT10Q6XYQ8 523 aa16.64■□□□□ 0.25
GABPB1-202ENST00000359031 FAM83AQ86UY5 434 aa16.64■□□□□ 0.25
GABPB1-202ENST00000359031 CSGALNACT2Q8N6G5 542 aa16.64■□□□□ 0.25
GABPB1-202ENST00000359031 KIAA0895Q8NCT3 520 aa16.64■□□□□ 0.25
GABPB1-202ENST00000359031 DUSP9Q99956 384 aaKnown RBP16.64■□□□□ 0.25
GABPB1-202ENST00000359031 SRRTQ9BXP5 876 aaKnown RBP16.64■□□□□ 0.25
GABPB1-202ENST00000359031 ZBTB21Q9ULJ3 1066 aa16.64■□□□□ 0.25
GABPB1-202ENST00000359031 TMX2Q9Y320 296 aa16.64■□□□□ 0.25
GABPB1-202ENST00000359031 SPDYE3A6NKU9 549 aa16.63■□□□□ 0.25
GABPB1-202ENST00000359031 SREBF1P36956 1147 aa16.63■□□□□ 0.25
GABPB1-202ENST00000359031 ARHGAP4P98171 946 aa16.63■□□□□ 0.25
GABPB1-202ENST00000359031 PSMD2Q13200 908 aa16.63■□□□□ 0.25
GABPB1-202ENST00000359031 DPY19L2Q6NUT2 758 aa16.63■□□□□ 0.25
GABPB1-202ENST00000359031 FOXR2Q6PJQ5 311 aa16.63■□□□□ 0.25
GABPB1-202ENST00000359031 L2HGDHQ9H9P8 463 aa16.63■□□□□ 0.25
GABPB1-202ENST00000359031 STK24Q9Y6E0 443 aa16.63■□□□□ 0.25
GABPB1-202ENST00000359031 PIK3CDO00329 1044 aa16.63■□□□□ 0.25
GABPB1-202ENST00000359031 FCER1AP12319 257 aa16.63■□□□□ 0.25
GABPB1-202ENST00000359031 CASP14P31944 242 aa16.63■□□□□ 0.25
GABPB1-202ENST00000359031 STAT2P52630 851 aa16.63■□□□□ 0.25
GABPB1-202ENST00000359031 UBXN1Q04323 297 aa16.63■□□□□ 0.25
GABPB1-202ENST00000359031 HSP90AA2PQ14568 343 aaPredicted RBP16.63■□□□□ 0.25
GABPB1-202ENST00000359031 Q4G0T1 1027 aa16.63■□□□□ 0.25
GABPB1-202ENST00000359031 TOGARAM2Q6ZUX3 1019 aa16.63■□□□□ 0.25
GABPB1-202ENST00000359031 ZNF710Q8N1W2 664 aa16.63■□□□□ 0.25
GABPB1-202ENST00000359031 ANKRD7Q92527 254 aa16.63■□□□□ 0.25
GABPB1-202ENST00000359031 NUDT12Q9BQG2 462 aa16.63■□□□□ 0.25
GABPB1-202ENST00000359031 SH2D4AQ9H788 454 aa16.63■□□□□ 0.25
GABPB1-202ENST00000359031 PRR12Q9ULL5 1215 aa16.63■□□□□ 0.25
GABPB1-202ENST00000359031 CCDC175P0C221 793 aa16.62■□□□□ 0.25
GABPB1-202ENST00000359031 DNM2P50570 870 aa16.62■□□□□ 0.25
GABPB1-202ENST00000359031 FXR1P51114 621 aaKnown RBP eCLIP16.62■□□□□ 0.25
GABPB1-202ENST00000359031 EHHADHQ08426 723 aa16.62■□□□□ 0.25
GABPB1-202ENST00000359031 HAUS3Q68CZ6 603 aa16.62■□□□□ 0.25
GABPB1-202ENST00000359031 CENPPQ6IPU0 288 aa16.62■□□□□ 0.25
GABPB1-202ENST00000359031 TRIM65Q6PJ69 517 aa16.62■□□□□ 0.25
GABPB1-202ENST00000359031 GUF1Q8N442 669 aaKnown RBP16.62■□□□□ 0.25
GABPB1-202ENST00000359031 MB21D1Q8N884 522 aa16.62■□□□□ 0.25
GABPB1-202ENST00000359031 TSC1Q92574 1164 aa16.62■□□□□ 0.25
GABPB1-202ENST00000359031 ERO1AQ96HE7 468 aa16.62■□□□□ 0.25
GABPB1-202ENST00000359031 PDCL3Q9H2J4 239 aa16.62■□□□□ 0.25
GABPB1-202ENST00000359031 ABHD10Q9NUJ1 306 aa16.62■□□□□ 0.25
GABPB1-202ENST00000359031 PLA2G6O60733 806 aa16.61■□□□□ 0.25
GABPB1-202ENST00000359031 SLU7O95391 586 aaKnown RBP16.61■□□□□ 0.25
GABPB1-202ENST00000359031 FGFR1OPO95684 399 aaKnown RBP16.61■□□□□ 0.25
GABPB1-202ENST00000359031 CIITAP33076 1130 aa16.61■□□□□ 0.25
GABPB1-202ENST00000359031 USH1GQ495M9 461 aa16.61■□□□□ 0.25
GABPB1-202ENST00000359031 ANKRD40Q6AI12 368 aa16.61■□□□□ 0.25
GABPB1-202ENST00000359031 KCNK18Q7Z418 384 aa16.61■□□□□ 0.25
GABPB1-202ENST00000359031 TMTC1Q8IUR5 882 aa16.61■□□□□ 0.25
GABPB1-202ENST00000359031 ETNPPLQ8TBG4 499 aa16.61■□□□□ 0.25
GABPB1-202ENST00000359031 ZNF507Q8TCN5 953 aa16.61■□□□□ 0.25
GABPB1-202ENST00000359031 CPLX3Q8WVH0 158 aa16.61■□□□□ 0.25
GABPB1-202ENST00000359031 DDX12PQ92771 950 aa16.61■□□□□ 0.25
GABPB1-202ENST00000359031 ZBED3Q96IU2 234 aaPredicted RBP16.61■□□□□ 0.25
GABPB1-202ENST00000359031 CNOT6LQ96LI5 555 aaKnown RBP16.61■□□□□ 0.25
GABPB1-202ENST00000359031 VEZTQ9HBM0 779 aa16.61■□□□□ 0.25
GABPB1-202ENST00000359031 ZBTB12Q9Y330 459 aaPredicted RBP16.61■□□□□ 0.25
GABPB1-202ENST00000359031 ABCB11O95342 1321 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms