RNA–Protein interactions for RNA: ENST00000358694.10

CTNND1-201, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-201ENST00000358694 NFKBIL1Q9UBC1 381 aaPredicted RBP9.62□□□□□ -0.87
CTNND1-201ENST00000358694 CREB3O43889 395 aa9.61□□□□□ -0.87
CTNND1-201ENST00000358694 KRT1P04264 644 aa9.61□□□□□ -0.87
CTNND1-201ENST00000358694 VCPP55072 806 aaKnown RBP9.61□□□□□ -0.87
CTNND1-201ENST00000358694 MAP3K7CLP57077 242 aa9.61□□□□□ -0.87
CTNND1-201ENST00000358694 TFAMQ00059 246 aaKnown RBP9.61□□□□□ -0.87
CTNND1-201ENST00000358694 CYP4A11Q02928 519 aa9.61□□□□□ -0.87
CTNND1-201ENST00000358694 TBC1D10BQ4KMP7 808 aaPredicted RBP9.61□□□□□ -0.87
CTNND1-201ENST00000358694 ODR4Q5SWX8 454 aa9.61□□□□□ -0.87
CTNND1-201ENST00000358694 GJA10Q969M2 543 aa9.61□□□□□ -0.87
CTNND1-201ENST00000358694 METTL22Q9BUU2 404 aaPredicted RBP9.61□□□□□ -0.87
CTNND1-201ENST00000358694 YIPF2Q9BWQ6 316 aa9.61□□□□□ -0.87
CTNND1-201ENST00000358694 ADD3Q9UEY8 706 aaKnown RBP9.61□□□□□ -0.87
CTNND1-201ENST00000358694 ZNF215Q9UL58 517 aaPredicted RBP9.61□□□□□ -0.87
CTNND1-201ENST00000358694 NCAPD3P42695 1498 aa9.61□□□□□ -0.87
CTNND1-201ENST00000358694 LRRD1A4D1F6 860 aa9.61□□□□□ -0.87
CTNND1-201ENST00000358694 H2AFZP0C0S5 128 aa9.61□□□□□ -0.87
CTNND1-201ENST00000358694 NNMTP40261 264 aa9.61□□□□□ -0.87
CTNND1-201ENST00000358694 PEX19P40855 299 aa9.61□□□□□ -0.87
CTNND1-201ENST00000358694 ARL13BQ3SXY8 428 aa9.61□□□□□ -0.87
CTNND1-201ENST00000358694 H2AFVQ71UI9 128 aa9.61□□□□□ -0.87
CTNND1-201ENST00000358694 BLIDQ8IZY5 108 aa9.61□□□□□ -0.87
CTNND1-201ENST00000358694 DHX38Q92620 1227 aaKnown RBP9.61□□□□□ -0.87
CTNND1-201ENST00000358694 EPAS1Q99814 870 aa9.61□□□□□ -0.87
CTNND1-201ENST00000358694 TRIM15Q9C019 465 aa9.61□□□□□ -0.87
CTNND1-201ENST00000358694 C19orf44Q9H6X5 657 aa9.61□□□□□ -0.87
CTNND1-201ENST00000358694 E9PMD0 336 aa9.61□□□□□ -0.87
CTNND1-201ENST00000358694 MED7O43513 233 aa9.61□□□□□ -0.87
CTNND1-201ENST00000358694 SNX2O60749 519 aa9.61□□□□□ -0.87
CTNND1-201ENST00000358694 FMNL1O95466 1100 aaPredicted RBP9.61□□□□□ -0.87
CTNND1-201ENST00000358694 MAPK4P31152 587 aa9.61□□□□□ -0.87
CTNND1-201ENST00000358694 ZNF75DP51815 510 aa9.61□□□□□ -0.87
CTNND1-201ENST00000358694 SKOR1P84550 965 aa9.61□□□□□ -0.87
CTNND1-201ENST00000358694 DAB2P98082 770 aa9.61□□□□□ -0.87
CTNND1-201ENST00000358694 ARMCX2Q7L311 632 aa9.61□□□□□ -0.87
CTNND1-201ENST00000358694 KLHDC4Q8TBB5 520 aa9.61□□□□□ -0.87
CTNND1-201ENST00000358694 GSDMAQ96QA5 445 aa9.61□□□□□ -0.87
CTNND1-201ENST00000358694 NXF1Q9UBU9 619 aaKnown RBP9.61□□□□□ -0.87
CTNND1-201ENST00000358694 E2F6O75461 281 aa9.61□□□□□ -0.87
CTNND1-201ENST00000358694 GOLGA8HP0CJ92 632 aa9.61□□□□□ -0.87
CTNND1-201ENST00000358694 UBXN2AP68543 259 aa9.61□□□□□ -0.87
CTNND1-201ENST00000358694 DRP2Q13474 957 aa9.61□□□□□ -0.87
CTNND1-201ENST00000358694 ADALQ6DHV7 355 aa9.61□□□□□ -0.87
CTNND1-201ENST00000358694 PDXDC1Q6P996 788 aa9.61□□□□□ -0.87
CTNND1-201ENST00000358694 PATL1Q86TB9 770 aaKnown RBP9.61□□□□□ -0.87
CTNND1-201ENST00000358694 PDCD6IPQ8WUM4 868 aaKnown RBP9.61□□□□□ -0.87
CTNND1-201ENST00000358694 SUN2Q9UH99 717 aa9.61□□□□□ -0.87
CTNND1-201ENST00000358694 PCDHA1Q9Y5I3 950 aa9.61□□□□□ -0.87
CTNND1-201ENST00000358694 ADGRL1O94910 1474 aa9.61□□□□□ -0.87
CTNND1-201ENST00000358694 KDM2BQ8NHM5 1336 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 HSPD1P10809 573 aaKnown RBP9.6□□□□□ -0.87
CTNND1-201ENST00000358694 LONP1P36776 959 aaKnown RBP9.6□□□□□ -0.87
CTNND1-201ENST00000358694 OSTNP61366 133 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 PSMD2Q13200 908 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 LBRQ14739 615 aaKnown RBP9.6□□□□□ -0.87
CTNND1-201ENST00000358694 TMED2Q15363 201 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 ABCB5Q2M3G0 1257 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 TCP11X2Q5H9J9 407 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 SLFN13Q68D06 897 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 TTC23LQ6PF05 361 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 OR8K1Q8NGG5 319 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 TRIM11Q96F44 468 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 STX18Q9P2W9 335 aaKnown RBP9.6□□□□□ -0.87
CTNND1-201ENST00000358694 ZSCAN9O15535 394 aaPredicted RBP9.6□□□□□ -0.87
CTNND1-201ENST00000358694 SUN1O94901 812 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 GCP02774 474 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 SLC8A1P32418 973 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 HSPA2P54652 639 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 SLC26A7Q8TE54 656 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 BTN2A2Q8WVV5 523 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 KIFC3Q9BVG8 833 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 CALN1Q9BXU9 219 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 CBX8Q9HC52 389 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 KMT5AQ9NQR1 393 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 BRD1O95696 1058 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 ZAP70P43403 619 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 IFNAR2P48551 515 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 CCDC85BQ15834 202 aaPredicted RBP9.6□□□□□ -0.87
CTNND1-201ENST00000358694 NEK8Q86SG6 692 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 SLC17A8Q8NDX2 589 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 CCDC51Q96ER9 411 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 SLC39A2Q9NP94 309 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 CLCA2Q9UQC9 943 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 NCOA1Q15788 1441 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 PRPSAP2O60256 369 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 MYL3P08590 195 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 GOLGA8FQ08AF8 430 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 GOLGA8DPQ0D2H9 430 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 IMPG1Q17R60 797 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 FLAD1Q8NFF5 587 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 SCOCQ9UIL1 159 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 FRMD3A2A2Y4 597 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 ZRANB2O95218 330 aaKnown RBP eCLIP9.6□□□□□ -0.877e-11■■■■■ 70
CTNND1-201ENST00000358694 OR52Z1P0C646 297 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 TAC1P20366 129 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 TMED1Q13445 227 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 CMTR1Q8N1G2 835 aaKnown RBP9.6□□□□□ -0.87
CTNND1-201ENST00000358694 FBXO41Q8TF61 875 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 HEXIM2Q96MH2 286 aaKnown RBP9.6□□□□□ -0.87
CTNND1-201ENST00000358694 ZSCAN10Q96SZ4 725 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms