RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 KRT26Q7Z3Y9 468 aa19.62■□□□□ 0.73
RTN4-204ENST00000357732 BAP1Q92560 729 aa19.62■□□□□ 0.73
RTN4-204ENST00000357732 LARP4BQ92615 738 aaKnown RBP19.62■□□□□ 0.73
RTN4-204ENST00000357732 LRRC1Q9BTT6 524 aa19.62■□□□□ 0.73
RTN4-204ENST00000357732 RASA1P20936 1047 aa19.61■□□□□ 0.73
RTN4-204ENST00000357732 REXO1Q8N1G1 1221 aaKnown RBP19.61■□□□□ 0.73
RTN4-204ENST00000357732 SETDB2Q96T68 719 aa19.61■□□□□ 0.73
RTN4-204ENST00000357732 STX8Q9UNK0 236 aa19.61■□□□□ 0.73
RTN4-204ENST00000357732 CNTNAP4Q9C0A0 1308 aa19.61■□□□□ 0.73
RTN4-204ENST00000357732 MOCS3O95396 460 aa19.61■□□□□ 0.73
RTN4-204ENST00000357732 PLEKP08567 350 aaPredicted RBP19.61■□□□□ 0.73
RTN4-204ENST00000357732 IRAK1P51617 712 aa19.61■□□□□ 0.73
RTN4-204ENST00000357732 SKOR1P84550 965 aa19.61■□□□□ 0.73
RTN4-204ENST00000357732 TTC31Q49AM3 519 aaPredicted RBP19.61■□□□□ 0.73
RTN4-204ENST00000357732 CFAP221Q4G0U5 840 aa19.61■□□□□ 0.73
RTN4-204ENST00000357732 PDXDC1Q6P996 788 aa19.61■□□□□ 0.73
RTN4-204ENST00000357732 BARGINQ6ZT62 677 aa19.61■□□□□ 0.73
RTN4-204ENST00000357732 RIN2Q8WYP3 895 aaPredicted RBP19.61■□□□□ 0.73
RTN4-204ENST00000357732 CAPS2Q9BXY5 557 aa19.61■□□□□ 0.73
RTN4-204ENST00000357732 BLOC1S4Q9NUP1 217 aa19.61■□□□□ 0.73
RTN4-204ENST00000357732 A0A087WUV0 522 aaPredicted RBP19.6■□□□□ 0.73
RTN4-204ENST00000357732 LRRC53A6NM62 1247 aa19.6■□□□□ 0.73
RTN4-204ENST00000357732 EHHADHQ08426 723 aa19.6■□□□□ 0.73
RTN4-204ENST00000357732 GRB10Q13322 594 aa19.6■□□□□ 0.73
RTN4-204ENST00000357732 HAUS3Q68CZ6 603 aa19.6■□□□□ 0.73
RTN4-204ENST00000357732 PTF1AQ7RTS3 328 aa19.6■□□□□ 0.73
RTN4-204ENST00000357732 NEDD1Q8NHV4 660 aa19.6■□□□□ 0.73
RTN4-204ENST00000357732 TBCKQ8TEA7 893 aa19.6■□□□□ 0.73
RTN4-204ENST00000357732 CDK5RAP3Q96JB5 506 aa19.6■□□□□ 0.73
RTN4-204ENST00000357732 RUFY1Q96T51 708 aa19.6■□□□□ 0.73
RTN4-204ENST00000357732 MMRN2Q9H8L6 949 aa19.6■□□□□ 0.73
RTN4-204ENST00000357732 SLC39A2Q9NP94 309 aa19.6■□□□□ 0.73
RTN4-204ENST00000357732 FAM207AQ9NSI2 230 aaPredicted RBP19.6■□□□□ 0.73
RTN4-204ENST00000357732 MTMR7Q9Y216 660 aa19.6■□□□□ 0.73
RTN4-204ENST00000357732 TNRC6CQ9HCJ0 1690 aaKnown RBP19.6■□□□□ 0.73
RTN4-204ENST00000357732 GRID2IPA4D2P6 1211 aa19.59■□□□□ 0.73
RTN4-204ENST00000357732 HSF2BPO75031 334 aa19.59■□□□□ 0.73
RTN4-204ENST00000357732 NOVP48745 357 aa19.59■□□□□ 0.73
RTN4-204ENST00000357732 C8orf74Q6P047 294 aa19.59■□□□□ 0.73
RTN4-204ENST00000357732 LRRC55Q6ZSA7 311 aa19.59■□□□□ 0.73
RTN4-204ENST00000357732 IFT20Q8IY31 132 aa19.59■□□□□ 0.73
RTN4-204ENST00000357732 GSPT2Q8IYD1 628 aaKnown RBP19.59■□□□□ 0.73
RTN4-204ENST00000357732 SH3RF3Q8TEJ3 882 aaPredicted RBP19.59■□□□□ 0.73
RTN4-204ENST00000357732 MLXIPQ9HAP2 919 aa19.59■□□□□ 0.73
RTN4-204ENST00000357732 DMGDHQ9UI17 866 aaKnown RBP19.59■□□□□ 0.73
RTN4-204ENST00000357732 MYMKA6NI61 221 aa19.59■□□□□ 0.73
RTN4-204ENST00000357732 C16orf86Q6ZW13 317 aa19.59■□□□□ 0.73
RTN4-204ENST00000357732 RRAGAQ7L523 313 aa19.59■□□□□ 0.73
RTN4-204ENST00000357732 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.59■□□□□ 0.73
RTN4-204ENST00000357732 CEP72Q9P209 647 aa19.59■□□□□ 0.73
RTN4-204ENST00000357732 NARFQ9UHQ1 456 aa19.59■□□□□ 0.73
RTN4-204ENST00000357732 ATXN2Q99700 1313 aaKnown RBP19.59■□□□□ 0.73
RTN4-204ENST00000357732 DDX60LQ5H9U9 1706 aaKnown RBP19.59■□□□□ 0.73
RTN4-204ENST00000357732 SHTN1A0MZ66 631 aa19.58■□□□□ 0.73
RTN4-204ENST00000357732 EBAG9O00559 213 aa19.58■□□□□ 0.73
RTN4-204ENST00000357732 EIF3HO15372 352 aaKnown RBP eCLIP19.58■□□□□ 0.73
RTN4-204ENST00000357732 GNA14O95837 355 aa19.58■□□□□ 0.73
RTN4-204ENST00000357732 CALCRLQ16602 461 aa19.58■□□□□ 0.73
RTN4-204ENST00000357732 SLC9C1Q4G0N8 1177 aa19.58■□□□□ 0.73
RTN4-204ENST00000357732 CACNA2D4Q7Z3S7 1137 aa19.58■□□□□ 0.73
RTN4-204ENST00000357732 C1orf131Q8NDD1 294 aaKnown RBP19.58■□□□□ 0.73
RTN4-204ENST00000357732 RAD54LQ92698 747 aa19.58■□□□□ 0.73
RTN4-204ENST00000357732 LEMD3Q9Y2U8 911 aa19.58■□□□□ 0.73
RTN4-204ENST00000357732 SNED1Q8TER0 1413 aa19.58■□□□□ 0.73
RTN4-204ENST00000357732 TM4SF1P30408 202 aa19.58■□□□□ 0.72
RTN4-204ENST00000357732 NOP2P46087 812 aaKnown RBP19.58■□□□□ 0.72
RTN4-204ENST00000357732 MREGQ8N565 214 aa19.58■□□□□ 0.72
RTN4-204ENST00000357732 SMCR8Q8TEV9 937 aaPredicted RBP19.58■□□□□ 0.72
RTN4-204ENST00000357732 EEF2KMTQ96G04 330 aa19.58■□□□□ 0.72
RTN4-204ENST00000357732 GDAP1L1Q96MZ0 367 aa19.58■□□□□ 0.72
RTN4-204ENST00000357732 TLR10Q9BXR5 811 aa19.58■□□□□ 0.72
RTN4-204ENST00000357732 EPHB6O15197 1021 aa19.57■□□□□ 0.72
RTN4-204ENST00000357732 SLC26A4O43511 780 aa19.57■□□□□ 0.72
RTN4-204ENST00000357732 SERPING1P05155 500 aa19.57■□□□□ 0.72
RTN4-204ENST00000357732 NFRKBQ6P4R8 1299 aa19.57■□□□□ 0.72
RTN4-204ENST00000357732 POTEDQ86YR6 584 aa19.57■□□□□ 0.72
RTN4-204ENST00000357732 EIF1ADQ8N9N8 165 aaKnown RBP19.57■□□□□ 0.72
RTN4-204ENST00000357732 SLC44A5Q8NCS7 719 aa19.57■□□□□ 0.72
RTN4-204ENST00000357732 CEP63Q96MT8 703 aa19.57■□□□□ 0.72
RTN4-204ENST00000357732 PNMA5Q96PV4 448 aa19.57■□□□□ 0.72
RTN4-204ENST00000357732 RIOX1Q9H6W3 641 aa19.57■□□□□ 0.72
RTN4-204ENST00000357732 FKBP3Q00688 224 aaKnown RBP19.57■□□□□ 0.72
RTN4-204ENST00000357732 DIXDC1Q155Q3 683 aa19.57■□□□□ 0.72
RTN4-204ENST00000357732 GRIK5Q16478 980 aa19.57■□□□□ 0.72
RTN4-204ENST00000357732 TMEM119Q4V9L6 283 aa19.57■□□□□ 0.72
RTN4-204ENST00000357732 EMC10Q5UCC4 262 aa19.57■□□□□ 0.72
RTN4-204ENST00000357732 KLHDC7AQ5VTJ3 777 aa19.57■□□□□ 0.72
RTN4-204ENST00000357732 KRT79Q5XKE5 535 aa19.57■□□□□ 0.72
RTN4-204ENST00000357732 TADA2BQ86TJ2 420 aa19.57■□□□□ 0.72
RTN4-204ENST00000357732 SPATS2Q86XZ4 545 aaKnown RBP19.57■□□□□ 0.72
RTN4-204ENST00000357732 EYA3Q99504 573 aa19.57■□□□□ 0.72
RTN4-204ENST00000357732 GDF3Q9NR23 364 aa19.57■□□□□ 0.72
RTN4-204ENST00000357732 CES2O00748 559 aa19.56■□□□□ 0.72
RTN4-204ENST00000357732 ZEB2O60315 1214 aa19.56■□□□□ 0.72
RTN4-204ENST00000357732 PLCG2P16885 1265 aa19.56■□□□□ 0.72
RTN4-204ENST00000357732 MARSP56192 900 aaKnown RBP19.56■□□□□ 0.72
RTN4-204ENST00000357732 FAM98CQ17RN3 349 aaKnown RBP19.56■□□□□ 0.72
RTN4-204ENST00000357732 HGSNATQ68CP4 663 aa19.56■□□□□ 0.72
RTN4-204ENST00000357732 PPP1R18Q6NYC8 613 aa19.56■□□□□ 0.72
RTN4-204ENST00000357732 C15orf52Q6ZUT6 534 aaKnown RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms