RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 CDKL2Q92772 493 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 NACC1Q96RE7 527 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.29□□□□□ -1.4
BRCA1-203ENST00000357654 CAMSAP2Q08AD1 1489 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 STX2P32856 288 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 ARHGEF18Q6ZSZ5 1173 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 PEX26Q7Z412 305 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 PLA2G4DQ86XP0 818 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 IQUBQ8NA54 791 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 DEPDC1BQ8WUY9 529 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 DRC3Q9H069 523 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 SLC52A1Q9NWF4 448 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 STX18Q9P2W9 335 aaKnown RBP6.29□□□□□ -1.4
BRCA1-203ENST00000357654 GDAQ9Y2T3 454 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 PRXQ9BXM0 1461 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 PIK3R4Q99570 1358 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 LRRIQ1Q96JM4 1722 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 SNUPNO95149 360 aaKnown RBP6.28□□□□□ -1.4
BRCA1-203ENST00000357654 CPP00450 1065 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 TROVE2P10155 538 aaKnown RBP eCLIP6.28□□□□□ -1.4
BRCA1-203ENST00000357654 CCND2P30279 289 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 PPARGP37231 505 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-203ENST00000357654 GUCY2FP51841 1108 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 KLHL30Q0D2K2 578 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 LRRC74AQ0VAA2 488 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 ANO1Q5XXA6 986 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 CABP7Q86V35 215 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 HMG20BQ9P0W2 317 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-203ENST00000357654 MRPL11Q9Y3B7 192 aaKnown RBP6.28□□□□□ -1.4
BRCA1-203ENST00000357654 C2CD2LO14523 706 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 TOM1L1O75674 476 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 HMBSP08397 361 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 CYP4A11Q02928 519 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 TSNAXIP1Q2TAA8 658 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 TYW1BQ6NUM6 668 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 TMTC1Q8IUR5 882 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 CACTINQ8WUQ7 758 aaKnown RBP6.28□□□□□ -1.4
BRCA1-203ENST00000357654 CENPTQ96BT3 561 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 SPON2Q9BUD6 331 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 PCIF1Q9H4Z3 704 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 PAPOLBQ9NRJ5 636 aaKnown RBP6.28□□□□□ -1.4
BRCA1-203ENST00000357654 CPSF2Q9P2I0 782 aaKnown RBP6.28□□□□□ -1.4
BRCA1-203ENST00000357654 ZNF148Q9UQR1 794 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 PPEF1O14829 653 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-203ENST00000357654 GTPBP6O43824 516 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-203ENST00000357654 TECP42680 631 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 PSMC5P62195 406 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 BTBD8Q5XKL5 378 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 KLHL24Q6TFL4 600 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 RUFY4Q6ZNE9 571 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 RNF168Q8IYW5 571 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-203ENST00000357654 KCTD6Q8NC69 237 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 PKNOX2Q96KN3 472 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 IFNKQ9P0W0 207 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 BCAP29Q9UHQ4 241 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 ZNF233A6NK53 670 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 NBNO60934 754 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 E2F6O75461 281 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 DARSP14868 501 aaKnown RBP6.28□□□□□ -1.4
BRCA1-203ENST00000357654 ANKS6Q68DC2 871 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 NT5DC4Q86YG4 428 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 PIP4K2CQ8TBX8 421 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 BHMTQ93088 406 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 PNMA5Q96PV4 448 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 SMARCAD1Q9H4L7 1026 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 ZC3H4Q9UPT8 1303 aaKnown RBP6.28□□□□□ -1.4
BRCA1-203ENST00000357654 GRM8O00222 908 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 EBAG9O00559 213 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 EEF1DP29692 281 aaKnown RBP6.28□□□□□ -1.4
BRCA1-203ENST00000357654 CSE1LP55060 971 aaKnown RBP6.28□□□□□ -1.4
BRCA1-203ENST00000357654 BTN2A1Q7KYR7 527 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 POMGNT2Q8NAT1 580 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 EXD1Q8NHP7 514 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 ULK4Q96C45 1275 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 CHCHD3Q9NX63 227 aaKnown RBP6.28□□□□□ -1.4
BRCA1-203ENST00000357654 SCOCQ9UIL1 159 aa6.28□□□□□ -1.4
BRCA1-203ENST00000357654 HSPA1AP0DMV8 641 aaKnown RBP6.27□□□□□ -1.4
BRCA1-203ENST00000357654 HSPA1BP0DMV9 641 aaKnown RBP6.27□□□□□ -1.4
BRCA1-203ENST00000357654 NCF2P19878 526 aaPredicted RBP6.27□□□□□ -1.4
BRCA1-203ENST00000357654 SCNN1BP51168 640 aa6.27□□□□□ -1.4
BRCA1-203ENST00000357654 PWP1Q13610 501 aa6.27□□□□□ -1.4
BRCA1-203ENST00000357654 DARS2Q6PI48 645 aaKnown RBP6.27□□□□□ -1.4
BRCA1-203ENST00000357654 JPH2Q9BR39 696 aaPredicted RBP6.27□□□□□ -1.4
BRCA1-203ENST00000357654 ASCC2Q9H1I8 757 aaPredicted RBP6.27□□□□□ -1.4
BRCA1-203ENST00000357654 ALDH1A2O94788 518 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 MOCS3O95396 460 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 DDX5P17844 614 aaKnown RBP6.27□□□□□ -1.41
BRCA1-203ENST00000357654 ARL4AP40617 200 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 CYP27A1Q02318 531 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 ICA1Q05084 483 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 NOL9Q5SY16 702 aaKnown RBP6.27□□□□□ -1.41
BRCA1-203ENST00000357654 PASD1Q8IV76 773 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 SPATA18Q8TC71 538 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 ZC3H15Q8WU90 426 aaKnown RBP6.27□□□□□ -1.41
BRCA1-203ENST00000357654 P3H4Q92791 437 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 FAM207AQ9NSI2 230 aaPredicted RBP6.27□□□□□ -1.41
BRCA1-203ENST00000357654 TLK1Q9UKI8 766 aa6.27□□□□□ -1.41
BRCA1-203ENST00000357654 UBA6A0AVT1 1052 aaPredicted RBP6.27□□□□□ -1.41
BRCA1-203ENST00000357654 HNRNPDLO14979 420 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms