RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 CAGE1Q8TC20 777 aa16.95■□□□□ 0.3
PTBP1-203ENST00000356948 SECISBP2LQ93073 1101 aaKnown RBP16.95■□□□□ 0.3
PTBP1-203ENST00000356948 DHTKD1Q96HY7 919 aaPredicted RBP16.95■□□□□ 0.3
PTBP1-203ENST00000356948 AMOTL1Q8IY63 956 aa16.95■□□□□ 0.3
PTBP1-203ENST00000356948 SNX29Q8TEQ0 813 aa16.95■□□□□ 0.3
PTBP1-203ENST00000356948 HNRNPLLQ8WVV9 542 aaKnown RBP16.95■□□□□ 0.3
PTBP1-203ENST00000356948 SPZ1Q9BXG8 430 aa16.95■□□□□ 0.3
PTBP1-203ENST00000356948 PACSIN2Q9UNF0 486 aaPredicted RBP16.95■□□□□ 0.3
PTBP1-203ENST00000356948 GPR75-ASB3A0A0A6YYF3 556 aa16.95■□□□□ 0.3
PTBP1-203ENST00000356948 E9PMD0 336 aa16.95■□□□□ 0.3
PTBP1-203ENST00000356948 SYF2O95926 243 aaKnown RBP16.95■□□□□ 0.3
PTBP1-203ENST00000356948 DOK7Q18PE1 504 aa16.95■□□□□ 0.3
PTBP1-203ENST00000356948 CCDC42Q96M95 316 aa16.95■□□□□ 0.3
PTBP1-203ENST00000356948 IKZF4Q9H2S9 585 aa16.95■□□□□ 0.3
PTBP1-203ENST00000356948 NDST4Q9H3R1 872 aa16.95■□□□□ 0.3
PTBP1-203ENST00000356948 ROBO3Q96MS0 1386 aa16.95■□□□□ 0.3
PTBP1-203ENST00000356948 USP17L10C9JJH3 530 aa16.94■□□□□ 0.3
PTBP1-203ENST00000356948 KRT25Q7Z3Z0 450 aa16.94■□□□□ 0.3
PTBP1-203ENST00000356948 CERS5Q8N5B7 392 aa16.94■□□□□ 0.3
PTBP1-203ENST00000356948 RPGRQ92834 1020 aaKnown RBP16.94■□□□□ 0.3
PTBP1-203ENST00000356948 TANGO6Q9C0B7 1094 aa16.94■□□□□ 0.3
PTBP1-203ENST00000356948 EHD4Q9H223 541 aa16.94■□□□□ 0.3
PTBP1-203ENST00000356948 SIK3Q9Y2K2 1263 aa16.94■□□□□ 0.3
PTBP1-203ENST00000356948 ZBED6P86452 979 aa16.94■□□□□ 0.3
PTBP1-203ENST00000356948 TTC31Q49AM3 519 aaPredicted RBP16.94■□□□□ 0.3
PTBP1-203ENST00000356948 HAS1Q92839 578 aa16.94■□□□□ 0.3
PTBP1-203ENST00000356948 LRRC1Q9BTT6 524 aa16.94■□□□□ 0.3
PTBP1-203ENST00000356948 RRP15Q9Y3B9 282 aaKnown RBP16.94■□□□□ 0.3
PTBP1-203ENST00000356948 DAGLAQ9Y4D2 1042 aa16.94■□□□□ 0.3
PTBP1-203ENST00000356948 ZSCAN5CA6NGD5 496 aaPredicted RBP16.94■□□□□ 0.3
PTBP1-203ENST00000356948 TTC19Q6DKK2 380 aaPredicted RBP16.94■□□□□ 0.3
PTBP1-203ENST00000356948 SV2BQ7L1I2 683 aa16.94■□□□□ 0.3
PTBP1-203ENST00000356948 LARP4BQ92615 738 aaKnown RBP16.94■□□□□ 0.3
PTBP1-203ENST00000356948 PYM1Q9BRP8 204 aaKnown RBP16.94■□□□□ 0.3
PTBP1-203ENST00000356948 GOLPH3Q9H4A6 298 aa16.94■□□□□ 0.3
PTBP1-203ENST00000356948 MYH1P12882 1939 aa16.93■□□□□ 0.3
PTBP1-203ENST00000356948 PRPHP41219 470 aa16.93■□□□□ 0.3
PTBP1-203ENST00000356948 RASSF7Q02833 373 aa16.93■□□□□ 0.3
PTBP1-203ENST00000356948 KCNMA1Q12791 1236 aa16.93■□□□□ 0.3
PTBP1-203ENST00000356948 NFIAQ12857 509 aa16.93■□□□□ 0.3
PTBP1-203ENST00000356948 VWA3BQ502W6 1294 aa16.93■□□□□ 0.3
PTBP1-203ENST00000356948 PAPD7Q5XG87 772 aaKnown RBP16.93■□□□□ 0.3
PTBP1-203ENST00000356948 ADGRF4Q8IZF3 695 aa16.93■□□□□ 0.3
PTBP1-203ENST00000356948 FAM204AQ9H8W3 233 aa16.93■□□□□ 0.3
PTBP1-203ENST00000356948 MPHOSPH10O00566 681 aaKnown RBP16.93■□□□□ 0.3
PTBP1-203ENST00000356948 CENPPQ6IPU0 288 aa16.93■□□□□ 0.3
PTBP1-203ENST00000356948 CREG2Q8IUH2 290 aa16.93■□□□□ 0.3
PTBP1-203ENST00000356948 P2RX7Q99572 595 aaKnown RBP16.93■□□□□ 0.3
PTBP1-203ENST00000356948 IFIH1Q9BYX4 1025 aaKnown RBP16.93■□□□□ 0.3
PTBP1-203ENST00000356948 JMJD4Q9H9V9 463 aa16.93■□□□□ 0.3
PTBP1-203ENST00000356948 MTMR4Q9NYA4 1195 aa16.93■□□□□ 0.3
PTBP1-203ENST00000356948 LEMD3Q9Y2U8 911 aa16.93■□□□□ 0.3
PTBP1-203ENST00000356948 PCDHA13Q9Y5I0 950 aa16.93■□□□□ 0.3
PTBP1-203ENST00000356948 SLC1A4P43007 532 aa16.93■□□□□ 0.3
PTBP1-203ENST00000356948 KIF11P52732 1056 aa16.93■□□□□ 0.3
PTBP1-203ENST00000356948 MTMR8Q96EF0 704 aa16.93■□□□□ 0.3
PTBP1-203ENST00000356948 CALML4Q96GE6 196 aa16.93■□□□□ 0.3
PTBP1-203ENST00000356948 ZC3H4Q9UPT8 1303 aaKnown RBP16.93■□□□□ 0.3
PTBP1-203ENST00000356948 KRT86O43790 486 aa16.92■□□□□ 0.3
PTBP1-203ENST00000356948 GNA11P29992 359 aa16.92■□□□□ 0.3
PTBP1-203ENST00000356948 TRADDQ15628 312 aa16.92■□□□□ 0.3
PTBP1-203ENST00000356948 MICALL1Q8N3F8 863 aa16.92■□□□□ 0.3
PTBP1-203ENST00000356948 TBC1D16Q8TBP0 767 aa16.92■□□□□ 0.3
PTBP1-203ENST00000356948 ZHX3Q9H4I2 956 aa16.92■□□□□ 0.3
PTBP1-203ENST00000356948 GGCXP38435 758 aa16.92■□□□□ 0.3
PTBP1-203ENST00000356948 MNAT1P51948 309 aa16.92■□□□□ 0.3
PTBP1-203ENST00000356948 TCP10Q12799 353 aa16.92■□□□□ 0.3
PTBP1-203ENST00000356948 ZSCAN29Q8IWY8 852 aaPredicted RBP16.92■□□□□ 0.3
PTBP1-203ENST00000356948 ZNHIT6Q9NWK9 470 aaKnown RBP16.92■□□□□ 0.3
PTBP1-203ENST00000356948 EIF3CLB5ME19 914 aaKnown RBP16.92■□□□□ 0.3
PTBP1-203ENST00000356948 MEIS1O00470 390 aa16.92■□□□□ 0.3
PTBP1-203ENST00000356948 LRRC55Q6ZSA7 311 aa16.92■□□□□ 0.3
PTBP1-203ENST00000356948 CDK5RAP3Q96JB5 506 aa16.92■□□□□ 0.3
PTBP1-203ENST00000356948 EIF3CQ99613 913 aaKnown RBP16.92■□□□□ 0.3
PTBP1-203ENST00000356948 MYO1AQ9UBC5 1043 aa16.92■□□□□ 0.3
PTBP1-203ENST00000356948 GGA1Q9UJY5 639 aa16.92■□□□□ 0.3
PTBP1-203ENST00000356948 ESYT3A0FGR9 886 aa16.91■□□□□ 0.3
PTBP1-203ENST00000356948 PACSIN1Q9BY11 444 aa16.91■□□□□ 0.3
PTBP1-203ENST00000356948 RIOX1Q9H6W3 641 aa16.91■□□□□ 0.3
PTBP1-203ENST00000356948 AGPSO00116 658 aa16.91■□□□□ 0.3
PTBP1-203ENST00000356948 TLR2O60603 784 aa16.91■□□□□ 0.3
PTBP1-203ENST00000356948 RNF40O75150 1001 aa16.91■□□□□ 0.3
PTBP1-203ENST00000356948 ERLIN1O75477 346 aa16.91■□□□□ 0.3
PTBP1-203ENST00000356948 CYLC1P35663 651 aaPredicted RBP16.91■□□□□ 0.3
PTBP1-203ENST00000356948 GSTO1P78417 241 aa16.91■□□□□ 0.3
PTBP1-203ENST00000356948 KIF5AQ12840 1032 aa16.91■□□□□ 0.3
PTBP1-203ENST00000356948 NAV1Q8NEY1 1877 aa16.91■□□□□ 0.3
PTBP1-203ENST00000356948 CDK5RAP2Q96SN8 1893 aa16.91■□□□□ 0.3
PTBP1-203ENST00000356948 POTEB3A0JP26 581 aa16.9■□□□□ 0.3
PTBP1-203ENST00000356948 POTECB2RU33 542 aa16.9■□□□□ 0.3
PTBP1-203ENST00000356948 AKR1B10O60218 316 aa16.9■□□□□ 0.3
PTBP1-203ENST00000356948 ADCY7P51828 1080 aa16.9■□□□□ 0.3
PTBP1-203ENST00000356948 KRT83P78385 493 aa16.9■□□□□ 0.3
PTBP1-203ENST00000356948 RC3H1Q5TC82 1133 aaKnown RBP16.9■□□□□ 0.3
PTBP1-203ENST00000356948 POTEBQ6S5H4 581 aa16.9■□□□□ 0.3
PTBP1-203ENST00000356948 BAP1Q92560 729 aa16.9■□□□□ 0.3
PTBP1-203ENST00000356948 HPCAL4Q9UM19 191 aa16.9■□□□□ 0.3
PTBP1-203ENST00000356948 CASP5P51878 434 aa16.9■□□□□ 0.3
PTBP1-203ENST00000356948 VAV2P52735 878 aa16.9■□□□□ 0.3
PTBP1-203ENST00000356948 DNAJC21Q5F1R6 531 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms