RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 GTPBP6O43824 516 aaPredicted RBP12.3□□□□□ -0.44
FN1-204ENST00000356005 PPM1KQ8N3J5 372 aa12.3□□□□□ -0.44
FN1-204ENST00000356005 ABCA6Q8N139 1617 aa12.29□□□□□ -0.44
FN1-204ENST00000356005 GOLGA4Q13439 2230 aaKnown RBP12.29□□□□□ -0.44
FN1-204ENST00000356005 ERICH4A6NGS2 130 aa12.29□□□□□ -0.44
FN1-204ENST00000356005 GBP1P32455 592 aa12.29□□□□□ -0.44
FN1-204ENST00000356005 PHKA2P46019 1235 aa12.29□□□□□ -0.44
FN1-204ENST00000356005 SKA2Q8WVK7 121 aaPredicted RBP12.29□□□□□ -0.44
FN1-204ENST00000356005 GPKOWQ92917 476 aaPredicted RBP eCLIP12.29□□□□□ -0.44
FN1-204ENST00000356005 KRT12Q99456 494 aa12.29□□□□□ -0.44
FN1-204ENST00000356005 TRIM56Q9BRZ2 755 aaKnown RBP12.29□□□□□ -0.44
FN1-204ENST00000356005 NOL3O60936 208 aaKnown RBP12.29□□□□□ -0.44
FN1-204ENST00000356005 AP3B2Q13367 1082 aa12.29□□□□□ -0.44
FN1-204ENST00000356005 CDC37Q16543 378 aaPredicted RBP12.29□□□□□ -0.44
FN1-204ENST00000356005 NME8Q8N427 588 aa12.29□□□□□ -0.44
FN1-204ENST00000356005 ARHGEF1Q92888 912 aaKnown RBP12.29□□□□□ -0.44
FN1-204ENST00000356005 IFIH1Q9BYX4 1025 aaKnown RBP12.29□□□□□ -0.44
FN1-204ENST00000356005 SH3GLB2Q9NR46 395 aa12.29□□□□□ -0.44
FN1-204ENST00000356005 KARSQ15046 597 aaKnown RBP12.29□□□□□ -0.44
FN1-204ENST00000356005 SUSD4Q5VX71 490 aa12.29□□□□□ -0.44
FN1-204ENST00000356005 RUFY4Q6ZNE9 571 aa12.29□□□□□ -0.44
FN1-204ENST00000356005 CLSTN2Q9H4D0 955 aa12.29□□□□□ -0.44
FN1-204ENST00000356005 AGLP35573 1532 aa12.29□□□□□ -0.44
FN1-204ENST00000356005 TBC1D8O95759 1140 aa12.29□□□□□ -0.44
FN1-204ENST00000356005 MAGEA1P43355 309 aa12.29□□□□□ -0.44
FN1-204ENST00000356005 SNAPC2Q13487 334 aa12.29□□□□□ -0.44
FN1-204ENST00000356005 ZNRF3Q9ULT6 936 aa12.29□□□□□ -0.44
FN1-204ENST00000356005 MYCP01106 439 aaPredicted RBP12.29□□□□□ -0.44
FN1-204ENST00000356005 MAN1A1P33908 653 aa12.29□□□□□ -0.44
FN1-204ENST00000356005 TBC1D9BQ66K14 1250 aa12.29□□□□□ -0.44
FN1-204ENST00000356005 RRAGAQ7L523 313 aa12.29□□□□□ -0.44
FN1-204ENST00000356005 MCPH1Q8NEM0 835 aa12.29□□□□□ -0.44
FN1-204ENST00000356005 ATRIPQ8WXE1 791 aa12.29□□□□□ -0.44
FN1-204ENST00000356005 NLRP4Q96MN2 994 aa12.29□□□□□ -0.44
FN1-204ENST00000356005 SLC38A10Q9HBR0 1119 aa12.29□□□□□ -0.44
FN1-204ENST00000356005 SERPINA10Q9UK55 444 aa12.29□□□□□ -0.44
FN1-204ENST00000356005 NSFP46459 744 aaKnown RBP12.29□□□□□ -0.44
FN1-204ENST00000356005 LARP4BQ92615 738 aaKnown RBP12.29□□□□□ -0.44
FN1-204ENST00000356005 MAP3K20Q9NYL2 800 aaKnown RBP12.29□□□□□ -0.44
FN1-204ENST00000356005 TLDC2A0PJX2 215 aa12.28□□□□□ -0.44
FN1-204ENST00000356005 ADAM9Q13443 819 aa12.28□□□□□ -0.44
FN1-204ENST00000356005 FAM26FQ5R3K3 315 aa12.28□□□□□ -0.44
FN1-204ENST00000356005 DSTYKQ6XUX3 929 aa12.28□□□□□ -0.44
FN1-204ENST00000356005 CCDC127Q96BQ5 260 aa12.28□□□□□ -0.44
FN1-204ENST00000356005 FAM114A2Q9NRY5 505 aa12.28□□□□□ -0.44
FN1-204ENST00000356005 IQGAP1P46940 1657 aa12.28□□□□□ -0.44
FN1-204ENST00000356005 LRRIQ1Q96JM4 1722 aa12.28□□□□□ -0.44
FN1-204ENST00000356005 CIB2O75838 187 aa12.28□□□□□ -0.44
FN1-204ENST00000356005 RPN1P04843 607 aaKnown RBP12.28□□□□□ -0.44
FN1-204ENST00000356005 FANCCQ00597 558 aa12.28□□□□□ -0.44
FN1-204ENST00000356005 DENND2CQ68D51 928 aa12.28□□□□□ -0.44
FN1-204ENST00000356005 BZW1Q7L1Q6 419 aaKnown RBP12.28□□□□□ -0.44
FN1-204ENST00000356005 TRIM62Q9BVG3 475 aa12.28□□□□□ -0.44
FN1-204ENST00000356005 NFE2L3Q9Y4A8 694 aa12.28□□□□□ -0.44
FN1-204ENST00000356005 A0A0D9SFI3 127 aa12.28□□□□□ -0.44
FN1-204ENST00000356005 GOLGA8QA0A0J9YX86 632 aa12.28□□□□□ -0.44
FN1-204ENST00000356005 GOLGA8OA6NCC3 632 aa12.28□□□□□ -0.44
FN1-204ENST00000356005 ASB14A6NK59 587 aa12.28□□□□□ -0.44
FN1-204ENST00000356005 GOLGA8NF8WBI6 632 aa12.28□□□□□ -0.44
FN1-204ENST00000356005 CPA1P15085 419 aa12.28□□□□□ -0.44
FN1-204ENST00000356005 GARSP41250 739 aaKnown RBP12.28□□□□□ -0.44
FN1-204ENST00000356005 PPP2R5CQ13362 524 aa12.28□□□□□ -0.44
FN1-204ENST00000356005 MTMR3Q13615 1198 aa12.28□□□□□ -0.44
FN1-204ENST00000356005 MORC3Q14149 939 aa12.28□□□□□ -0.44
FN1-204ENST00000356005 SKIV2LQ15477 1246 aaKnown RBP12.28□□□□□ -0.44
FN1-204ENST00000356005 TRERF1Q96PN7 1200 aa12.28□□□□□ -0.44
FN1-204ENST00000356005 RMDN3Q96TC7 470 aa12.28□□□□□ -0.44
FN1-204ENST00000356005 PARK7Q99497 189 aaKnown RBP12.28□□□□□ -0.44
FN1-204ENST00000356005 ZSWIM6Q9HCJ5 1215 aa12.28□□□□□ -0.44
FN1-204ENST00000356005 BRPF3Q9ULD4 1205 aa12.28□□□□□ -0.44
FN1-204ENST00000356005 SMIM23A6NLE4 172 aa12.28□□□□□ -0.44
FN1-204ENST00000356005 GH2P01242 217 aa12.28□□□□□ -0.44
FN1-204ENST00000356005 SATB1Q01826 763 aa12.28□□□□□ -0.44
FN1-204ENST00000356005 MYSM1Q5VVJ2 828 aa12.28□□□□□ -0.44
FN1-204ENST00000356005 INTS8Q75QN2 995 aaKnown RBP12.28□□□□□ -0.44
FN1-204ENST00000356005 HDXQ7Z353 690 aa12.28□□□□□ -0.44
FN1-204ENST00000356005 MINPP1Q9UNW1 487 aa12.28□□□□□ -0.44
FN1-204ENST00000356005 TFAMQ00059 246 aaKnown RBP12.28□□□□□ -0.44
FN1-204ENST00000356005 EXOC3L4Q17RC7 722 aa12.28□□□□□ -0.44
FN1-204ENST00000356005 NNMTP40261 264 aa12.28□□□□□ -0.44
FN1-204ENST00000356005 TSPY1Q01534 308 aa12.28□□□□□ -0.44
FN1-204ENST00000356005 KRT33BQ14525 404 aa12.28□□□□□ -0.44
FN1-204ENST00000356005 C2orf40Q9H1Z8 148 aa12.28□□□□□ -0.44
FN1-204ENST00000356005 BCAP29Q9UHQ4 241 aa12.28□□□□□ -0.44
FN1-204ENST00000356005 PPRC1Q5VV67 1664 aaKnown RBP12.28□□□□□ -0.44
FN1-204ENST00000356005 KCNQ4P56696 695 aa12.27□□□□□ -0.44
FN1-204ENST00000356005 CYP4A11Q02928 519 aa12.27□□□□□ -0.44
FN1-204ENST00000356005 CDKL2Q92772 493 aa12.27□□□□□ -0.44
FN1-204ENST00000356005 KIAA1586Q9HCI6 787 aa12.27□□□□□ -0.44
FN1-204ENST00000356005 FARP1Q9Y4F1 1045 aaPredicted RBP12.27□□□□□ -0.44
FN1-204ENST00000356005 KCNJ18B7U540 433 aa12.27□□□□□ -0.44
FN1-204ENST00000356005 DPYSL4O14531 572 aa12.27□□□□□ -0.44
FN1-204ENST00000356005 LRMPQ12912 555 aa12.27□□□□□ -0.44
FN1-204ENST00000356005 MTMR1Q13613 665 aa12.27□□□□□ -0.44
FN1-204ENST00000356005 KCNJ12Q14500 433 aa12.27□□□□□ -0.44
FN1-204ENST00000356005 SDCCAG8Q86SQ7 713 aaPredicted RBP12.27□□□□□ -0.44
FN1-204ENST00000356005 TRIM58Q8NG06 486 aa12.27□□□□□ -0.44
FN1-204ENST00000356005 GANCQ8TET4 914 aa12.27□□□□□ -0.44
FN1-204ENST00000356005 CRAMP1Q96RY5 1269 aa12.27□□□□□ -0.44
FN1-204ENST00000356005 ABCB11O95342 1321 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms