RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 TCP11X2Q5H9J9 407 aa15.46■□□□□ 0.07
SREBF1-202ENST00000355815 ERMNQ8TAM6 284 aa15.46■□□□□ 0.07
SREBF1-202ENST00000355815 SUGCTQ9HAC7 445 aa15.46■□□□□ 0.07
SREBF1-202ENST00000355815 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.46■□□□□ 0.07
SREBF1-202ENST00000355815 RASAL2Q9UJF2 1139 aa15.46■□□□□ 0.07
SREBF1-202ENST00000355815 PARP3Q9Y6F1 533 aa15.46■□□□□ 0.07
SREBF1-202ENST00000355815 WDR19Q8NEZ3 1342 aa15.46■□□□□ 0.07
SREBF1-202ENST00000355815 STK36Q9NRP7 1315 aa15.46■□□□□ 0.07
SREBF1-202ENST00000355815 MFAP3LO75121 409 aa15.46■□□□□ 0.06
SREBF1-202ENST00000355815 CALCOCO2Q13137 446 aa15.46■□□□□ 0.06
SREBF1-202ENST00000355815 GSTA5Q7RTV2 222 aa15.46■□□□□ 0.06
SREBF1-202ENST00000355815 GPBP1Q86WP2 473 aa15.46■□□□□ 0.06
SREBF1-202ENST00000355815 CCDC65Q8IXS2 484 aa15.46■□□□□ 0.06
SREBF1-202ENST00000355815 STMN2Q93045 179 aa15.46■□□□□ 0.06
SREBF1-202ENST00000355815 LRRC45Q96CN5 670 aa15.46■□□□□ 0.06
SREBF1-202ENST00000355815 NKIRAS1Q9NYS0 192 aa15.46■□□□□ 0.06
SREBF1-202ENST00000355815 MTRF1LQ9UGC7 380 aaKnown RBP15.46■□□□□ 0.06
SREBF1-202ENST00000355815 IKBKGQ9Y6K9 419 aa15.46■□□□□ 0.06
SREBF1-202ENST00000355815 DNM2P50570 870 aa15.45■□□□□ 0.06
SREBF1-202ENST00000355815 TPH2Q8IWU9 490 aa15.45■□□□□ 0.06
SREBF1-202ENST00000355815 TC2NQ8N9U0 490 aa15.45■□□□□ 0.06
SREBF1-202ENST00000355815 SPATS2LQ9NUQ6 558 aaKnown RBP15.45■□□□□ 0.06
SREBF1-202ENST00000355815 TTC26A0AVF1 554 aa15.45■□□□□ 0.06
SREBF1-202ENST00000355815 POLR2FP61218 127 aaKnown RBP15.45■□□□□ 0.06
SREBF1-202ENST00000355815 RAD9BQ6WBX8 426 aa15.45■□□□□ 0.06
SREBF1-202ENST00000355815 KRT26Q7Z3Y9 468 aa15.45■□□□□ 0.06
SREBF1-202ENST00000355815 VGLL2Q8N8G2 317 aa15.45■□□□□ 0.06
SREBF1-202ENST00000355815 CLRN2A0PK11 232 aa15.45■□□□□ 0.06
SREBF1-202ENST00000355815 TXNDC9O14530 226 aa15.45■□□□□ 0.06
SREBF1-202ENST00000355815 FAM13AO94988 1023 aa15.45■□□□□ 0.06
SREBF1-202ENST00000355815 UAP1Q16222 522 aaPredicted RBP15.45■□□□□ 0.06
SREBF1-202ENST00000355815 SLC9C1Q4G0N8 1177 aa15.45■□□□□ 0.06
SREBF1-202ENST00000355815 CCDC77Q9BR77 488 aa15.45■□□□□ 0.06
SREBF1-202ENST00000355815 PHF20Q9BVI0 1012 aa15.45■□□□□ 0.06
SREBF1-202ENST00000355815 ACTN4O43707 911 aaKnown RBP15.44■□□□□ 0.06
SREBF1-202ENST00000355815 SORBS3O60504 671 aa15.44■□□□□ 0.06
SREBF1-202ENST00000355815 OGFOD1Q8N543 542 aa15.44■□□□□ 0.06
SREBF1-202ENST00000355815 BPIFA3Q9BQP9 254 aa15.44■□□□□ 0.06
SREBF1-202ENST00000355815 IQCGQ9H095 443 aaKnown RBP15.44■□□□□ 0.06
SREBF1-202ENST00000355815 DDX25Q9UHL0 483 aaKnown RBP15.44■□□□□ 0.06
SREBF1-202ENST00000355815 SFI1A8K8P3 1242 aa15.44■□□□□ 0.06
SREBF1-202ENST00000355815 TCP10L2B9ZVM9 353 aa15.44■□□□□ 0.06
SREBF1-202ENST00000355815 TDP2O95551 362 aa15.44■□□□□ 0.06
SREBF1-202ENST00000355815 RASSF7Q02833 373 aa15.44■□□□□ 0.06
SREBF1-202ENST00000355815 TTBK2Q6IQ55 1244 aa15.44■□□□□ 0.06
SREBF1-202ENST00000355815 CCDC50Q8IVM0 306 aa15.44■□□□□ 0.06
SREBF1-202ENST00000355815 CCDC26Q8TAB7 109 aa15.44■□□□□ 0.06
SREBF1-202ENST00000355815 SERPINB13Q9UIV8 391 aa15.44■□□□□ 0.06
SREBF1-202ENST00000355815 ADGRG1Q9Y653 693 aa15.44■□□□□ 0.06
SREBF1-202ENST00000355815 KCNK3O14649 394 aa15.44■□□□□ 0.06
SREBF1-202ENST00000355815 GRAPQ13588 217 aa15.44■□□□□ 0.06
SREBF1-202ENST00000355815 ZKSCAN8Q15776 578 aaPredicted RBP15.44■□□□□ 0.06
SREBF1-202ENST00000355815 DGKHQ86XP1 1220 aa15.44■□□□□ 0.06
SREBF1-202ENST00000355815 GRAPLQ8TC17 118 aaPredicted RBP15.44■□□□□ 0.06
SREBF1-202ENST00000355815 P2RX5Q93086 422 aa15.44■□□□□ 0.06
SREBF1-202ENST00000355815 SMC6Q96SB8 1091 aa15.44■□□□□ 0.06
SREBF1-202ENST00000355815 LEMD3Q9Y2U8 911 aa15.44■□□□□ 0.06
SREBF1-202ENST00000355815 A0A087X0B3 334 aa15.43■□□□□ 0.06
SREBF1-202ENST00000355815 BMP6P22004 513 aa15.43■□□□□ 0.06
SREBF1-202ENST00000355815 VPS41P49754 854 aa15.43■□□□□ 0.06
SREBF1-202ENST00000355815 FAM133BQ5BKY9 247 aaKnown RBP15.43■□□□□ 0.06
SREBF1-202ENST00000355815 TEKT1Q969V4 418 aa15.43■□□□□ 0.06
SREBF1-202ENST00000355815 KIFC2Q96AC6 838 aa15.43■□□□□ 0.06
SREBF1-202ENST00000355815 RIOK1Q9BRS2 568 aaKnown RBP15.43■□□□□ 0.06
SREBF1-202ENST00000355815 EPB41L5Q9HCM4 733 aa15.43■□□□□ 0.06
SREBF1-202ENST00000355815 HPSEQ9Y251 543 aa15.43■□□□□ 0.06
SREBF1-202ENST00000355815 BACH1O14867 736 aa15.43■□□□□ 0.06
SREBF1-202ENST00000355815 NDUFA10O95299 355 aa15.43■□□□□ 0.06
SREBF1-202ENST00000355815 GCNT3O95395 438 aa15.43■□□□□ 0.06
SREBF1-202ENST00000355815 SLURP2P0DP57 97 aa15.43■□□□□ 0.06
SREBF1-202ENST00000355815 HOXA13P31271 388 aaPredicted RBP15.43■□□□□ 0.06
SREBF1-202ENST00000355815 BIRC2Q13490 618 aa15.43■□□□□ 0.06
SREBF1-202ENST00000355815 WDR78Q5VTH9 848 aa15.43■□□□□ 0.06
SREBF1-202ENST00000355815 CCDC63Q8NA47 563 aa15.43■□□□□ 0.06
SREBF1-202ENST00000355815 LARP4BQ92615 738 aaKnown RBP15.43■□□□□ 0.06
SREBF1-202ENST00000355815 TSGA10Q9BZW7 698 aa15.43■□□□□ 0.06
SREBF1-202ENST00000355815 HAUS4Q9H6D7 363 aa15.43■□□□□ 0.06
SREBF1-202ENST00000355815 WNT7AO00755 349 aa15.43■□□□□ 0.06
SREBF1-202ENST00000355815 CETN3O15182 167 aa15.43■□□□□ 0.06
SREBF1-202ENST00000355815 HIP1RO75146 1068 aa15.43■□□□□ 0.06
SREBF1-202ENST00000355815 GPSM2P81274 684 aa15.43■□□□□ 0.06
SREBF1-202ENST00000355815 EHHADHQ08426 723 aa15.43■□□□□ 0.06
SREBF1-202ENST00000355815 TRIM14Q14142 442 aa15.43■□□□□ 0.06
SREBF1-202ENST00000355815 NYAP1Q6ZVC0 841 aa15.43■□□□□ 0.06
SREBF1-202ENST00000355815 LSM14BQ9BX40 385 aaKnown RBP15.43■□□□□ 0.06
SREBF1-202ENST00000355815 LRRC27Q9C0I9 530 aa15.43■□□□□ 0.06
SREBF1-202ENST00000355815 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.43■□□□□ 0.06
SREBF1-202ENST00000355815 ATP6V0A2Q9Y487 856 aa15.43■□□□□ 0.06
SREBF1-202ENST00000355815 USH1CQ9Y6N9 552 aa15.43■□□□□ 0.06
SREBF1-202ENST00000355815 SMIM24O75264 130 aa15.43■□□□□ 0.06
SREBF1-202ENST00000355815 EEF2P13639 858 aaKnown RBP15.43■□□□□ 0.06
SREBF1-202ENST00000355815 ATP2B4P23634 1241 aa15.43■□□□□ 0.06
SREBF1-202ENST00000355815 TRAPPC10P48553 1259 aa15.43■□□□□ 0.06
SREBF1-202ENST00000355815 KLHL30Q0D2K2 578 aa15.43■□□□□ 0.06
SREBF1-202ENST00000355815 C12orf60Q5U649 245 aa15.43■□□□□ 0.06
SREBF1-202ENST00000355815 ZNF579Q8NAF0 562 aaKnown RBP15.43■□□□□ 0.06
SREBF1-202ENST00000355815 KRT12Q99456 494 aa15.43■□□□□ 0.06
SREBF1-202ENST00000355815 TRIM7Q9C029 511 aa15.43■□□□□ 0.06
SREBF1-202ENST00000355815 SEMA3EO15041 775 aa15.42■□□□□ 0.06
SREBF1-202ENST00000355815 ATP2C1P98194 919 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms