RNA–Protein interactions for RNA: ENST00000355231.9

HMBOX1-202, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-202ENST00000355231 ZNF365Q70YC5 407 aa5.35□□□□□ -1.55
HMBOX1-202ENST00000355231 RSRC2Q7L4I2 434 aaKnown RBP5.35□□□□□ -1.55
HMBOX1-202ENST00000355231 KRI1Q8N9T8 703 aaKnown RBP5.35□□□□□ -1.55
HMBOX1-202ENST00000355231 SMARCC2Q8TAQ2 1214 aa5.35□□□□□ -1.55
HMBOX1-202ENST00000355231 BCAS4Q8TDM0 211 aa5.35□□□□□ -1.55
HMBOX1-202ENST00000355231 TRPC4APQ8TEL6 797 aa5.35□□□□□ -1.55
HMBOX1-202ENST00000355231 CACTINQ8WUQ7 758 aaKnown RBP5.35□□□□□ -1.55
HMBOX1-202ENST00000355231 MAIP1Q8WWC4 291 aa5.35□□□□□ -1.55
HMBOX1-202ENST00000355231 SPIRE2Q8WWL2 714 aa5.35□□□□□ -1.55
HMBOX1-202ENST00000355231 RUFY2Q8WXA3 655 aa5.35□□□□□ -1.55
HMBOX1-202ENST00000355231 KLRG1Q96E93 195 aa5.35□□□□□ -1.55
HMBOX1-202ENST00000355231 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.35□□□□□ -1.55
HMBOX1-202ENST00000355231 YIPF3Q9GZM5 350 aa5.35□□□□□ -1.55
HMBOX1-202ENST00000355231 MRPL46Q9H2W6 279 aaKnown RBP5.35□□□□□ -1.55
HMBOX1-202ENST00000355231 VCXQ9H320 206 aa5.35□□□□□ -1.55
HMBOX1-202ENST00000355231 RPAP3Q9H6T3 665 aaPredicted RBP5.35□□□□□ -1.55
HMBOX1-202ENST00000355231 SYNCQ9H7C4 482 aa5.35□□□□□ -1.55
HMBOX1-202ENST00000355231 SENP2Q9HC62 589 aa5.35□□□□□ -1.55
HMBOX1-202ENST00000355231 DMAP1Q9NPF5 467 aaPredicted RBP5.35□□□□□ -1.55
HMBOX1-202ENST00000355231 NOP53Q9NZM5 478 aaKnown RBP5.35□□□□□ -1.55
HMBOX1-202ENST00000355231 ZFATQ9P243 1243 aa5.35□□□□□ -1.55
HMBOX1-202ENST00000355231 SEL1LQ9UBV2 794 aa5.35□□□□□ -1.55
HMBOX1-202ENST00000355231 ZMAT5Q9UDW3 170 aaKnown RBP5.35□□□□□ -1.55
HMBOX1-202ENST00000355231 RAB21Q9UL25 225 aa5.35□□□□□ -1.55
HMBOX1-202ENST00000355231 N6AMT1Q9Y5N5 214 aa5.35□□□□□ -1.55
HMBOX1-202ENST00000355231 SNX14Q9Y5W7 946 aa5.35□□□□□ -1.55
HMBOX1-202ENST00000355231 FPGT-TNNI3KV9GXZ4 949 aa5.35□□□□□ -1.55
HMBOX1-202ENST00000355231 ARFGEF1Q9Y6D6 1849 aa5.35□□□□□ -1.55
HMBOX1-202ENST00000355231 TBKBP1A7MCY6 615 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 FAM25EA8MYX2 175 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 ATP5J2-PTCD1G3V325 749 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 FZD9O00144 591 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 EIF3HO15372 352 aaKnown RBP eCLIP5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 FLOT1O75955 427 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 SEC31AO94979 1220 aaKnown RBP5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 ITGBL1O95965 494 aaPredicted RBP5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 GSTA2P09210 222 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 NAT2P11245 290 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 S100A1P23297 94 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 TCF7P36402 384 aaPredicted RBP5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 FMR1Q06787 632 aaKnown RBP eCLIP5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 PDE4BQ07343 736 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 ZBTB17Q13105 803 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 CBX3Q13185 183 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 TCIRG1Q13488 830 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 SEPT2Q15019 361 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 SGSM1Q2NKQ1 1148 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 CCDC144BQ3MJ40 725 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 CMPK2Q5EBM0 449 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 CFAP157Q5JU67 520 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 EMC10Q5UCC4 262 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 CREB3L3Q68CJ9 461 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 CYB5D1Q6P9G0 228 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 POTEEQ6S8J3 1075 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 NCCRP1Q6ZVX7 275 aaPredicted RBP5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 NLRP10Q86W26 655 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 CCDC144CPQ8IYA2 1237 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 RTKN2Q8IZC4 609 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 SYCP3Q8IZU3 236 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 TTC39CQ8N584 583 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 ZGPATQ8N5A5 531 aaKnown RBP5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 KLHDC4Q8TBB5 520 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 KCNN1Q92952 543 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 ATP6V0A1Q93050 837 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 CGREF1Q99674 301 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 SLC39A3Q9BRY0 314 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 PLA2G12BQ9BX93 195 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 OSBPL10Q9BXB5 764 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 SEZ6LQ9BYH1 1024 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 TM6SF1Q9BZW5 370 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 CCDC8Q9H0W5 538 aaPredicted RBP5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 SIL1Q9H173 461 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 CENPHQ9H3R5 247 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 TAF1DQ9H5J8 278 aaPredicted RBP5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 SLC40A1Q9NP59 571 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 HELLSQ9NRZ9 838 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 WDR35Q9P2L0 1181 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 CTNNAL1Q9UBT7 734 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 DBNLQ9UJU6 430 aaKnown RBP5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 LHX6Q9UPM6 363 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 SATB2Q9UPW6 733 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 C15orf41Q9Y2V0 281 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 SH3GLB1Q9Y371 365 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 BZW2Q9Y6E2 419 aaKnown RBP5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 SLC4A7Q9Y6M7 1214 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 COL4A5P29400 1685 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 SBF1O95248 1867 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 SH3TC1Q8TE82 1336 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 ZNF609O15014 1411 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 COL11A2P13942 1736 aaPredicted RBP5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 SPEF2Q9C093 1822 aa5.34□□□□□ -1.55
HMBOX1-202ENST00000355231 ANKRD36CQ5JPF3 1778 aa5.34□□□□□ -1.56
HMBOX1-202ENST00000355231 SCN7AQ01118 1682 aa5.34□□□□□ -1.56
HMBOX1-202ENST00000355231 PALM3A6NDB9 673 aaPredicted RBP5.34□□□□□ -1.56
HMBOX1-202ENST00000355231 TRIM64CA6NLI5 447 aa5.34□□□□□ -1.56
HMBOX1-202ENST00000355231 GOLGA8KD6RF30 607 aa5.34□□□□□ -1.56
HMBOX1-202ENST00000355231 LSM1O15116 133 aaKnown RBP5.34□□□□□ -1.56
HMBOX1-202ENST00000355231 PFDN1O60925 122 aa5.34□□□□□ -1.56
HMBOX1-202ENST00000355231 PEX14O75381 377 aa5.34□□□□□ -1.56
HMBOX1-202ENST00000355231 CIAO1O76071 339 aa5.34□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms