RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 CBX8Q9HC52 389 aa23.15■■□□□ 1.3
TRIM4-202ENST00000354241 GBA2Q9HCG7 927 aaPredicted RBP23.15■■□□□ 1.3
TRIM4-202ENST00000354241 AGTPBP1Q9UPW5 1226 aa23.15■■□□□ 1.3
TRIM4-202ENST00000354241 A0A0G2JMZ2 1700 aa23.15■■□□□ 1.3
TRIM4-202ENST00000354241 GJA5P36382 358 aa23.14■■□□□ 1.3
TRIM4-202ENST00000354241 STAT3P40763 770 aa23.14■■□□□ 1.3
TRIM4-202ENST00000354241 ZNF165P49910 485 aa23.14■■□□□ 1.3
TRIM4-202ENST00000354241 ETNPPLQ8TBG4 499 aa23.14■■□□□ 1.3
TRIM4-202ENST00000354241 CALML4Q96GE6 196 aa23.14■■□□□ 1.3
TRIM4-202ENST00000354241 MMTAG2Q9BU76 263 aaKnown RBP23.14■■□□□ 1.3
TRIM4-202ENST00000354241 TBX3O15119 743 aa23.14■■□□□ 1.29
TRIM4-202ENST00000354241 CELF2O95319 508 aaKnown RBP23.14■■□□□ 1.29
TRIM4-202ENST00000354241 FASTKD5Q7L8L6 764 aaKnown RBP23.14■■□□□ 1.29
TRIM4-202ENST00000354241 STAMQ92783 540 aa23.14■■□□□ 1.29
TRIM4-202ENST00000354241 RPTORQ8N122 1335 aa23.13■■□□□ 1.29
TRIM4-202ENST00000354241 UNCXA6NJT0 531 aa23.13■■□□□ 1.29
TRIM4-202ENST00000354241 CAVIN2O95810 425 aa23.13■■□□□ 1.29
TRIM4-202ENST00000354241 PLCG1P19174 1290 aa23.13■■□□□ 1.29
TRIM4-202ENST00000354241 FKBP1BP68106 108 aa23.13■■□□□ 1.29
TRIM4-202ENST00000354241 UVSSAQ2YD98 709 aa23.13■■□□□ 1.29
TRIM4-202ENST00000354241 TKFCQ3LXA3 575 aa23.13■■□□□ 1.29
TRIM4-202ENST00000354241 DPCR1Q3MIW9 517 aa23.13■■□□□ 1.29
TRIM4-202ENST00000354241 SNX29Q8TEQ0 813 aa23.13■■□□□ 1.29
TRIM4-202ENST00000354241 ANP32BQ92688 251 aaKnown RBP23.13■■□□□ 1.29
TRIM4-202ENST00000354241 ZFP91Q96JP5 570 aaPredicted RBP23.13■■□□□ 1.29
TRIM4-202ENST00000354241 RABGAP1Q9Y3P9 1069 aa23.13■■□□□ 1.29
TRIM4-202ENST00000354241 IGLV3-22A0A075B6J6 115 aa23.12■■□□□ 1.29
TRIM4-202ENST00000354241 MSH4O15457 936 aa23.12■■□□□ 1.29
TRIM4-202ENST00000354241 CASP1P29466 404 aa23.12■■□□□ 1.29
TRIM4-202ENST00000354241 SNAPC2Q13487 334 aa23.12■■□□□ 1.29
TRIM4-202ENST00000354241 MOGSQ13724 837 aa23.12■■□□□ 1.29
TRIM4-202ENST00000354241 KRT79Q5XKE5 535 aa23.12■■□□□ 1.29
TRIM4-202ENST00000354241 LBX2Q6XYB7 198 aa23.12■■□□□ 1.29
TRIM4-202ENST00000354241 LUZP1Q86V48 1076 aa23.12■■□□□ 1.29
TRIM4-202ENST00000354241 PLA2G4DQ86XP0 818 aa23.12■■□□□ 1.29
TRIM4-202ENST00000354241 C2orf69Q8N8R5 385 aa23.12■■□□□ 1.29
TRIM4-202ENST00000354241 CDK5RAP3Q96JB5 506 aa23.12■■□□□ 1.29
TRIM4-202ENST00000354241 TAAR1Q96RJ0 339 aa23.12■■□□□ 1.29
TRIM4-202ENST00000354241 ASCC2Q9H1I8 757 aaPredicted RBP23.12■■□□□ 1.29
TRIM4-202ENST00000354241 SMC2O95347 1197 aa23.12■■□□□ 1.29
TRIM4-202ENST00000354241 BAATQ14032 418 aaPredicted RBP23.12■■□□□ 1.29
TRIM4-202ENST00000354241 NAALADL2Q58DX5 795 aa23.12■■□□□ 1.29
TRIM4-202ENST00000354241 MB21D1Q8N884 522 aa23.12■■□□□ 1.29
TRIM4-202ENST00000354241 FAM20AQ96MK3 541 aa23.12■■□□□ 1.29
TRIM4-202ENST00000354241 ACAD9Q9H845 621 aa23.12■■□□□ 1.29
TRIM4-202ENST00000354241 MAN1B1Q9UKM7 699 aa23.12■■□□□ 1.29
TRIM4-202ENST00000354241 CEP55Q53EZ4 464 aa23.11■■□□□ 1.29
TRIM4-202ENST00000354241 NAT10Q9H0A0 1025 aaKnown RBP23.11■■□□□ 1.29
TRIM4-202ENST00000354241 BTBD7Q9P203 1132 aa23.11■■□□□ 1.29
TRIM4-202ENST00000354241 PEX10O60683 326 aa23.1■■□□□ 1.29
TRIM4-202ENST00000354241 EIF2AK2P19525 551 aaKnown RBP23.1■■□□□ 1.29
TRIM4-202ENST00000354241 DPYDQ12882 1025 aa23.1■■□□□ 1.29
TRIM4-202ENST00000354241 PABPC4Q13310 644 aaKnown RBP eCLIP23.1■■□□□ 1.29
TRIM4-202ENST00000354241 GRB10Q13322 594 aa23.1■■□□□ 1.29
TRIM4-202ENST00000354241 NT5DC1Q5TFE4 455 aa23.1■■□□□ 1.29
TRIM4-202ENST00000354241 POTEEQ6S8J3 1075 aa23.1■■□□□ 1.29
TRIM4-202ENST00000354241 IL31RAQ8NI17 732 aa23.1■■□□□ 1.29
TRIM4-202ENST00000354241 PAGR1Q9BTK6 254 aa23.1■■□□□ 1.29
TRIM4-202ENST00000354241 BLZF1Q9H2G9 400 aa23.1■■□□□ 1.29
TRIM4-202ENST00000354241 OSBPP22059 807 aa23.1■■□□□ 1.29
TRIM4-202ENST00000354241 SARSP49591 514 aaKnown RBP23.1■■□□□ 1.29
TRIM4-202ENST00000354241 HERVK_113P62684 666 aa23.1■■□□□ 1.29
TRIM4-202ENST00000354241 LRRC15Q8TF66 581 aa23.1■■□□□ 1.29
TRIM4-202ENST00000354241 RMDN3Q96TC7 470 aa23.1■■□□□ 1.29
TRIM4-202ENST00000354241 MTRQ99707 1265 aa23.1■■□□□ 1.29
TRIM4-202ENST00000354241 NUDT12Q9BQG2 462 aa23.1■■□□□ 1.29
TRIM4-202ENST00000354241 CUEDC2Q9H467 287 aa23.1■■□□□ 1.29
TRIM4-202ENST00000354241 GTPBP6O43824 516 aaPredicted RBP23.09■■□□□ 1.29
TRIM4-202ENST00000354241 MKRN3Q13064 507 aaKnown RBP23.09■■□□□ 1.29
TRIM4-202ENST00000354241 GPAT2Q6NUI2 795 aa23.09■■□□□ 1.29
TRIM4-202ENST00000354241 PNMA5Q96PV4 448 aa23.09■■□□□ 1.29
TRIM4-202ENST00000354241 PURBQ96QR8 312 aaKnown RBP23.09■■□□□ 1.29
TRIM4-202ENST00000354241 MXRA8Q9BRK3 442 aa23.09■■□□□ 1.29
TRIM4-202ENST00000354241 FRMPD4Q14CM0 1322 aa23.08■■□□□ 1.29
TRIM4-202ENST00000354241 SETQ01105 290 aaPredicted RBP23.08■■□□□ 1.29
TRIM4-202ENST00000354241 CUL4BQ13620 913 aa23.08■■□□□ 1.29
TRIM4-202ENST00000354241 ARHGEF16Q5VV41 709 aa23.08■■□□□ 1.29
TRIM4-202ENST00000354241 PCNX4Q63HM2 1172 aa23.08■■□□□ 1.29
TRIM4-202ENST00000354241 NCAPH2Q6IBW4 605 aa23.08■■□□□ 1.29
TRIM4-202ENST00000354241 SPATA20Q8TB22 786 aa23.08■■□□□ 1.29
TRIM4-202ENST00000354241 PXMP2Q9NR77 195 aa23.08■■□□□ 1.29
TRIM4-202ENST00000354241 MEIS1O00470 390 aa23.08■■□□□ 1.28
TRIM4-202ENST00000354241 CCT6AP40227 531 aaKnown RBP23.08■■□□□ 1.28
TRIM4-202ENST00000354241 PGM5Q15124 567 aa23.08■■□□□ 1.28
TRIM4-202ENST00000354241 CHST13Q8NET6 341 aa23.08■■□□□ 1.28
TRIM4-202ENST00000354241 MAGEF1Q9HAY2 307 aa23.08■■□□□ 1.28
TRIM4-202ENST00000354241 A1CFQ9NQ94 594 aaKnown RBP23.08■■□□□ 1.28
TRIM4-202ENST00000354241 TRPM7Q96QT4 1865 aa23.07■■□□□ 1.28
TRIM4-202ENST00000354241 MYCLP12524 364 aaPredicted RBP23.07■■□□□ 1.28
TRIM4-202ENST00000354241 SPIRE1Q08AE8 756 aa23.07■■□□□ 1.28
TRIM4-202ENST00000354241 IQCB1Q15051 598 aa23.07■■□□□ 1.28
TRIM4-202ENST00000354241 RIOX2Q8IUF8 465 aa23.07■■□□□ 1.28
TRIM4-202ENST00000354241 TRIML1Q8N9V2 468 aa23.07■■□□□ 1.28
TRIM4-202ENST00000354241 SPATC1LQ9H0A9 340 aa23.07■■□□□ 1.28
TRIM4-202ENST00000354241 CYP39A1Q9NYL5 469 aa23.07■■□□□ 1.28
TRIM4-202ENST00000354241 ARP10275 920 aa23.06■■□□□ 1.28
TRIM4-202ENST00000354241 MORC3Q14149 939 aa23.06■■□□□ 1.28
TRIM4-202ENST00000354241 CHADLQ6NUI6 762 aa23.06■■□□□ 1.28
TRIM4-202ENST00000354241 PDCD2LQ9BRP1 358 aa23.06■■□□□ 1.28
TRIM4-202ENST00000354241 ZNF577Q9BSK1 485 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms