RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 OAS2P29728 719 aaKnown RBP10.86□□□□□ -0.67
COL11A1-201ENST00000353414 GARSP41250 739 aaKnown RBP10.86□□□□□ -0.67
COL11A1-201ENST00000353414 ZKSCAN8Q15776 578 aaPredicted RBP10.86□□□□□ -0.67
COL11A1-201ENST00000353414 RNF219Q5W0B1 726 aaPredicted RBP10.86□□□□□ -0.67
COL11A1-201ENST00000353414 TSC1Q92574 1164 aa10.86□□□□□ -0.67
COL11A1-201ENST00000353414 PI4K2BG5E9Z4 385 aa10.86□□□□□ -0.67
COL11A1-201ENST00000353414 PIK3R2O00459 728 aa10.86□□□□□ -0.67
COL11A1-201ENST00000353414 TSNAXIP1Q2TAA8 658 aa10.86□□□□□ -0.67
COL11A1-201ENST00000353414 ZNF496Q96IT1 587 aaPredicted RBP10.86□□□□□ -0.67
COL11A1-201ENST00000353414 CEP170P1Q96L14 293 aa10.86□□□□□ -0.67
COL11A1-201ENST00000353414 ZMAT2Q96NC0 199 aaKnown RBP10.86□□□□□ -0.67
COL11A1-201ENST00000353414 CLIC4Q9Y696 253 aa10.86□□□□□ -0.67
COL11A1-201ENST00000353414 CFLARO15519 480 aa10.86□□□□□ -0.67
COL11A1-201ENST00000353414 C21orf2O43822 256 aa10.86□□□□□ -0.67
COL11A1-201ENST00000353414 PPFIA2O75334 1257 aa10.86□□□□□ -0.67
COL11A1-201ENST00000353414 NCF2P19878 526 aaPredicted RBP10.86□□□□□ -0.67
COL11A1-201ENST00000353414 GCKP35557 465 aa10.86□□□□□ -0.67
COL11A1-201ENST00000353414 NUMBP49757 651 aa10.86□□□□□ -0.67
COL11A1-201ENST00000353414 BASP1P80723 227 aaKnown RBP10.86□□□□□ -0.67
COL11A1-201ENST00000353414 RETREG2Q8NC44 543 aa10.86□□□□□ -0.67
COL11A1-201ENST00000353414 DEPDC1BQ8WUY9 529 aa10.86□□□□□ -0.67
COL11A1-201ENST00000353414 ARPP21Q9UBL0 812 aaPredicted RBP10.86□□□□□ -0.67
COL11A1-201ENST00000353414 INHBAP08476 426 aa10.86□□□□□ -0.67
COL11A1-201ENST00000353414 RASSF2P50749 326 aa10.86□□□□□ -0.67
COL11A1-201ENST00000353414 TMED2Q15363 201 aa10.86□□□□□ -0.67
COL11A1-201ENST00000353414 FAM117BQ6P1L5 589 aa10.86□□□□□ -0.67
COL11A1-201ENST00000353414 ABTB1Q969K4 478 aaPredicted RBP10.86□□□□□ -0.67
COL11A1-201ENST00000353414 SLC12A6Q9UHW9 1150 aa10.86□□□□□ -0.67
COL11A1-201ENST00000353414 GTPBP6O43824 516 aaPredicted RBP10.86□□□□□ -0.67
COL11A1-201ENST00000353414 RPSAP08865 295 aaKnown RBP10.86□□□□□ -0.67
COL11A1-201ENST00000353414 PAK2Q13177 524 aa10.86□□□□□ -0.67
COL11A1-201ENST00000353414 OR6B2Q6IFH4 312 aa10.86□□□□□ -0.67
COL11A1-201ENST00000353414 PDZD4Q76G19 769 aaPredicted RBP10.86□□□□□ -0.67
COL11A1-201ENST00000353414 KDELC2Q7Z4H8 507 aa10.86□□□□□ -0.67
COL11A1-201ENST00000353414 RAB17Q9H0T7 212 aa10.86□□□□□ -0.67
COL11A1-201ENST00000353414 LRRC4Q9HBW1 653 aa10.86□□□□□ -0.67
COL11A1-201ENST00000353414 SAMSN1Q9NSI8 373 aaKnown RBP10.86□□□□□ -0.67
COL11A1-201ENST00000353414 ATP10AO60312 1499 aa10.86□□□□□ -0.67
COL11A1-201ENST00000353414 GIGYF1O75420 1035 aaPredicted RBP10.85□□□□□ -0.67
COL11A1-201ENST00000353414 GPC4O75487 556 aa10.85□□□□□ -0.67
COL11A1-201ENST00000353414 PASD1Q8IV76 773 aa10.85□□□□□ -0.67
COL11A1-201ENST00000353414 SLFN12Q8IYM2 578 aa10.85□□□□□ -0.67
COL11A1-201ENST00000353414 A0A1W2PP64 1363 aa10.85□□□□□ -0.67
COL11A1-201ENST00000353414 CPP00450 1065 aa10.85□□□□□ -0.67
COL11A1-201ENST00000353414 CLTAP09496 248 aa10.85□□□□□ -0.67
COL11A1-201ENST00000353414 ZNF75DP51815 510 aa10.85□□□□□ -0.67
COL11A1-201ENST00000353414 ARHGAP4P98171 946 aa10.85□□□□□ -0.67
COL11A1-201ENST00000353414 XPO4Q9C0E2 1151 aaKnown RBP10.85□□□□□ -0.67
COL11A1-201ENST00000353414 ATP8A2Q9NTI2 1148 aa10.85□□□□□ -0.67
COL11A1-201ENST00000353414 RIPOR2Q9Y4F9 1068 aa10.85□□□□□ -0.67
COL11A1-201ENST00000353414 CFAP74Q9C0B2 1584 aa10.85□□□□□ -0.67
COL11A1-201ENST00000353414 CYP2D7A0A087X1C5 515 aa10.85□□□□□ -0.67
COL11A1-201ENST00000353414 AGRPO00253 132 aa10.85□□□□□ -0.67
COL11A1-201ENST00000353414 SETSIPP0DME0 302 aa10.85□□□□□ -0.67
COL11A1-201ENST00000353414 EHHADHQ08426 723 aa10.85□□□□□ -0.67
COL11A1-201ENST00000353414 GRAMD1CQ8IYS0 662 aa10.85□□□□□ -0.67
COL11A1-201ENST00000353414 PIP4K2CQ8TBX8 421 aa10.85□□□□□ -0.67
COL11A1-201ENST00000353414 SYMPKQ92797 1274 aaKnown RBP10.85□□□□□ -0.67
COL11A1-201ENST00000353414 CNKSR1Q969H4 720 aa10.85□□□□□ -0.67
COL11A1-201ENST00000353414 SEC31BQ9NQW1 1179 aa10.85□□□□□ -0.67
COL11A1-201ENST00000353414 SLC13A4Q9UKG4 626 aa10.85□□□□□ -0.67
COL11A1-201ENST00000353414 ASAP1Q9ULH1 1129 aa10.85□□□□□ -0.67
COL11A1-201ENST00000353414 H3BRJ5 948 aa10.85□□□□□ -0.67
COL11A1-201ENST00000353414 EEF1B2P24534 225 aaKnown RBP10.85□□□□□ -0.67
COL11A1-201ENST00000353414 CDC25AP30304 524 aa10.85□□□□□ -0.67
COL11A1-201ENST00000353414 TRIM59Q8IWR1 403 aa10.85□□□□□ -0.67
COL11A1-201ENST00000353414 TBC1D22AQ8WUA7 517 aa10.85□□□□□ -0.67
COL11A1-201ENST00000353414 GLT8D2Q9H1C3 349 aa10.85□□□□□ -0.67
COL11A1-201ENST00000353414 PNMA2Q9UL42 364 aa10.85□□□□□ -0.67
COL11A1-201ENST00000353414 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.85□□□□□ -0.67
COL11A1-201ENST00000353414 PPFIA4O75335 1185 aa10.85□□□□□ -0.67
COL11A1-201ENST00000353414 UPP2O95045 317 aa10.85□□□□□ -0.67
COL11A1-201ENST00000353414 ATP2B4P23634 1241 aa10.85□□□□□ -0.67
COL11A1-201ENST00000353414 CRKLP46109 303 aaKnown RBP10.85□□□□□ -0.67
COL11A1-201ENST00000353414 SLCO1A2P46721 670 aa10.85□□□□□ -0.67
COL11A1-201ENST00000353414 TFDP1Q14186 410 aa10.85□□□□□ -0.67
COL11A1-201ENST00000353414 CAPRIN1Q14444 709 aaKnown RBP10.85□□□□□ -0.67
COL11A1-201ENST00000353414 ARHGAP24Q8N264 748 aa10.85□□□□□ -0.67
COL11A1-201ENST00000353414 CHAMP1Q96JM3 812 aa10.85□□□□□ -0.67
COL11A1-201ENST00000353414 LZTS2Q9BRK4 669 aa10.85□□□□□ -0.67
COL11A1-201ENST00000353414 ARMCX3Q9UH62 379 aaPredicted RBP10.85□□□□□ -0.67
COL11A1-201ENST00000353414 MRPS25P82663 173 aaKnown RBP10.85□□□□□ -0.67
COL11A1-201ENST00000353414 ME3Q16798 604 aa10.85□□□□□ -0.67
COL11A1-201ENST00000353414 DYNLL2Q96FJ2 89 aa10.85□□□□□ -0.67
COL11A1-201ENST00000353414 NT5C3AQ9H0P0 336 aa10.85□□□□□ -0.67
COL11A1-201ENST00000353414 NEURL1BA8MQ27 555 aa10.84□□□□□ -0.67
COL11A1-201ENST00000353414 RPN1P04843 607 aaKnown RBP10.84□□□□□ -0.67
COL11A1-201ENST00000353414 NSFP46459 744 aaKnown RBP10.84□□□□□ -0.67
COL11A1-201ENST00000353414 C8orf34Q49A92 452 aa10.84□□□□□ -0.67
COL11A1-201ENST00000353414 USP17L2Q6R6M4 530 aa10.84□□□□□ -0.67
COL11A1-201ENST00000353414 KBTBD3Q8NAB2 608 aa10.84□□□□□ -0.67
COL11A1-201ENST00000353414 ZNF507Q8TCN5 953 aa10.84□□□□□ -0.67
COL11A1-201ENST00000353414 ARHGAP45Q92619 1136 aa10.84□□□□□ -0.67
COL11A1-201ENST00000353414 PUS3Q9BZE2 481 aaKnown RBP10.84□□□□□ -0.67
COL11A1-201ENST00000353414 UBE2TQ9NPD8 197 aaPredicted RBP10.84□□□□□ -0.67
COL11A1-201ENST00000353414 ASPHQ12797 758 aa10.84□□□□□ -0.67
COL11A1-201ENST00000353414 PTGDRQ13258 359 aa10.84□□□□□ -0.67
COL11A1-201ENST00000353414 KIF19Q2TAC6 998 aa10.84□□□□□ -0.67
COL11A1-201ENST00000353414 SPOPLQ6IQ16 392 aa10.84□□□□□ -0.67
COL11A1-201ENST00000353414 P3H4Q92791 437 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms