RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 UTS2BQ765I0 119 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 FAM178BQ8IXR5 827 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 ZGPATQ8N5A5 531 aaKnown RBP6.6□□□□□ -1.35
RFC1-201ENST00000349703 FOXJ1Q92949 421 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 CHRAC1Q9NRG0 131 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 USP18Q9UMW8 372 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 CBFA2T2O43439 604 aa6.59□□□□□ -1.35
RFC1-201ENST00000349703 KINO60870 393 aaKnown RBP6.59□□□□□ -1.35
RFC1-201ENST00000349703 SETSIPP0DME0 302 aa6.59□□□□□ -1.35
RFC1-201ENST00000349703 PRKCHP24723 683 aa6.59□□□□□ -1.35
RFC1-201ENST00000349703 SAFBQ15424 915 aaKnown RBP eCLIP6.59□□□□□ -1.35
RFC1-201ENST00000349703 PI16Q6UXB8 463 aa6.59□□□□□ -1.35
RFC1-201ENST00000349703 ANKRD18AQ8IVF6 992 aa6.59□□□□□ -1.35
RFC1-201ENST00000349703 OXR1Q8N573 874 aa6.59□□□□□ -1.35
RFC1-201ENST00000349703 NGDNQ8NEJ9 315 aaKnown RBP6.59□□□□□ -1.35
RFC1-201ENST00000349703 PIF1Q9H611 641 aa6.59□□□□□ -1.35
RFC1-201ENST00000349703 TMEM5Q9Y2B1 443 aa6.59□□□□□ -1.35
RFC1-201ENST00000349703 TBC1D4O60343 1298 aa6.59□□□□□ -1.35
RFC1-201ENST00000349703 BLOC1S3Q6QNY0 202 aa6.59□□□□□ -1.35
RFC1-201ENST00000349703 CCDC186Q7Z3E2 898 aa6.59□□□□□ -1.35
RFC1-201ENST00000349703 PALB2Q86YC2 1186 aa6.59□□□□□ -1.35
RFC1-201ENST00000349703 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.59□□□□□ -1.35
RFC1-201ENST00000349703 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.59□□□□□ -1.35
RFC1-201ENST00000349703 KCTD13Q8WZ19 329 aa6.59□□□□□ -1.35
RFC1-201ENST00000349703 HOOK2Q96ED9 719 aa6.59□□□□□ -1.35
RFC1-201ENST00000349703 HES6Q96HZ4 224 aa6.59□□□□□ -1.35
RFC1-201ENST00000349703 RPS6KA6Q9UK32 745 aa6.59□□□□□ -1.35
RFC1-201ENST00000349703 CYP46A1Q9Y6A2 500 aa6.59□□□□□ -1.35
RFC1-201ENST00000349703 A0A0G2JS52 829 aa6.59□□□□□ -1.35
RFC1-201ENST00000349703 HIP1O00291 1037 aa6.59□□□□□ -1.35
RFC1-201ENST00000349703 POU5F1BQ06416 359 aa6.59□□□□□ -1.35
RFC1-201ENST00000349703 SNW1Q13573 536 aaKnown RBP6.59□□□□□ -1.35
RFC1-201ENST00000349703 TMED8Q6PL24 325 aaPredicted RBP6.59□□□□□ -1.35
RFC1-201ENST00000349703 TXNDC2Q86VQ3 553 aa6.59□□□□□ -1.35
RFC1-201ENST00000349703 PLEKHM2Q8IWE5 1019 aa6.59□□□□□ -1.35
RFC1-201ENST00000349703 DCTPP1Q9H773 170 aa6.59□□□□□ -1.35
RFC1-201ENST00000349703 SH2D4AQ9H788 454 aa6.59□□□□□ -1.35
RFC1-201ENST00000349703 RASAL1O95294 804 aa6.59□□□□□ -1.36
RFC1-201ENST00000349703 CBX7O95931 251 aa6.59□□□□□ -1.36
RFC1-201ENST00000349703 GNAI2P04899 355 aa6.59□□□□□ -1.36
RFC1-201ENST00000349703 ATF4P18848 351 aaPredicted RBP6.59□□□□□ -1.36
RFC1-201ENST00000349703 SDSP20132 328 aa6.59□□□□□ -1.36
RFC1-201ENST00000349703 RBM5P52756 815 aaKnown RBP eCLIP6.59□□□□□ -1.36
RFC1-201ENST00000349703 PLAURQ03405 335 aa6.59□□□□□ -1.36
RFC1-201ENST00000349703 TBC1D10BQ4KMP7 808 aaPredicted RBP6.59□□□□□ -1.36
RFC1-201ENST00000349703 MAMSTRQ6ZN01 415 aa6.59□□□□□ -1.36
RFC1-201ENST00000349703 KIAA1524Q8TCG1 905 aa6.59□□□□□ -1.36
RFC1-201ENST00000349703 SIPA1Q96FS4 1042 aa6.59□□□□□ -1.36
RFC1-201ENST00000349703 IRF2BPLQ9H1B7 796 aa6.59□□□□□ -1.36
RFC1-201ENST00000349703 NMRK2Q9NPI5 230 aa6.59□□□□□ -1.36
RFC1-201ENST00000349703 JADE2Q9NQC1 790 aa6.59□□□□□ -1.36
RFC1-201ENST00000349703 TMOD3Q9NYL9 352 aa6.59□□□□□ -1.36
RFC1-201ENST00000349703 CFAP45Q9UL16 551 aa6.59□□□□□ -1.36
RFC1-201ENST00000349703 ADAMTS12P58397 1594 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 TTC37Q6PGP7 1564 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 ZSCAN12O43309 604 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 PDGFAP04085 211 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 CYP7A1P22680 504 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 KRT83P78385 493 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 PPP4R3AQ6IN85 833 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 PET117Q6UWS5 81 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 ARHGAP18Q8N392 663 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 MYCT1Q8N699 235 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 THAP3Q8WTV1 239 aaPredicted RBP6.58□□□□□ -1.36
RFC1-201ENST00000349703 ANKRD7Q92527 254 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 ZFRQ96KR1 1074 aaKnown RBP6.58□□□□□ -1.36
RFC1-201ENST00000349703 CCDC113Q9H0I3 377 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 SNX6Q9UNH7 406 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 MAST1Q9Y2H9 1570 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 LRRIQ1Q96JM4 1722 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 GOLGA6L9A6NEM1 432 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 KIF5CO60282 957 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 RGS9O75916 674 aaPredicted RBP6.58□□□□□ -1.36
RFC1-201ENST00000349703 F13A1P00488 732 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 NFKB1P19838 968 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 PTGS1P23219 599 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 BCAMP50895 628 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 RRM2BQ7LG56 351 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 SPATA21Q7Z572 469 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 JAZF1Q86VZ6 243 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 RAB11FIP4Q86YS3 637 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 PGBD1Q96JS3 809 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 ZNF396Q96N95 335 aaPredicted RBP6.58□□□□□ -1.36
RFC1-201ENST00000349703 BARD1Q99728 777 aaKnown RBP6.58□□□□□ -1.36
RFC1-201ENST00000349703 ELAC2Q9BQ52 826 aaKnown RBP6.58□□□□□ -1.36
RFC1-201ENST00000349703 CFAP74Q9C0B2 1584 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 COPRSQ9NQ92 184 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 ANO10Q9NW15 660 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 SSH2Q76I76 1423 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 TRAPPC8Q9Y2L5 1435 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 A0A1B0GUL7 405 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 VGLL3A8MV65 326 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 NOS2P35228 1153 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 STX1AQ16623 288 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 LMBRD2Q68DH5 695 aaPredicted RBP6.58□□□□□ -1.36
RFC1-201ENST00000349703 GPR139Q6DWJ6 353 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 KDELC2Q7Z4H8 507 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 C7orf31Q8N865 590 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 CCDC110Q8TBZ0 833 aa6.58□□□□□ -1.36
RFC1-201ENST00000349703 ZNF512BQ96KM6 892 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms