RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 EHHADHQ08426 723 aa17.21■□□□□ 0.35
TNFSF13-202ENST00000349228 KIF5AQ12840 1032 aa17.21■□□□□ 0.35
TNFSF13-202ENST00000349228 PICALMQ13492 652 aa17.21■□□□□ 0.35
TNFSF13-202ENST00000349228 HYIQ5T013 277 aa17.21■□□□□ 0.35
TNFSF13-202ENST00000349228 CCDC42Q96M95 316 aa17.21■□□□□ 0.35
TNFSF13-202ENST00000349228 PURBQ96QR8 312 aaKnown RBP17.21■□□□□ 0.35
TNFSF13-202ENST00000349228 GPCPD1Q9NPB8 672 aa17.21■□□□□ 0.35
TNFSF13-202ENST00000349228 USP40Q9NVE5 1235 aa17.21■□□□□ 0.35
TNFSF13-202ENST00000349228 LRRC37AA6NMS7 1700 aa17.21■□□□□ 0.34
TNFSF13-202ENST00000349228 SLC37A4O43826 429 aa17.2■□□□□ 0.34
TNFSF13-202ENST00000349228 TDP2O95551 362 aa17.2■□□□□ 0.34
TNFSF13-202ENST00000349228 CYP2C19P33261 490 aa17.2■□□□□ 0.34
TNFSF13-202ENST00000349228 VAV2P52735 878 aa17.2■□□□□ 0.34
TNFSF13-202ENST00000349228 LRRC47Q8N1G4 583 aaKnown RBP17.2■□□□□ 0.34
TNFSF13-202ENST00000349228 ACBD3Q9H3P7 528 aa17.2■□□□□ 0.34
TNFSF13-202ENST00000349228 ST7Q9NRC1 585 aa17.2■□□□□ 0.34
TNFSF13-202ENST00000349228 DDX25Q9UHL0 483 aaKnown RBP17.2■□□□□ 0.34
TNFSF13-202ENST00000349228 L1RE1Q9UN81 338 aa17.2■□□□□ 0.34
TNFSF13-202ENST00000349228 EDIL3O43854 480 aa17.2■□□□□ 0.34
TNFSF13-202ENST00000349228 OAS2P29728 719 aaKnown RBP17.2■□□□□ 0.34
TNFSF13-202ENST00000349228 IQCEQ6IPM2 695 aa17.2■□□□□ 0.34
TNFSF13-202ENST00000349228 MRIQ9BWK5 157 aa17.2■□□□□ 0.34
TNFSF13-202ENST00000349228 NUCKS1Q9H1E3 243 aaKnown RBP17.2■□□□□ 0.34
TNFSF13-202ENST00000349228 SIK3Q9Y2K2 1263 aa17.2■□□□□ 0.34
TNFSF13-202ENST00000349228 MYH8P13535 1937 aa17.19■□□□□ 0.34
TNFSF13-202ENST00000349228 TARSL2A2RTX5 802 aaKnown RBP17.19■□□□□ 0.34
TNFSF13-202ENST00000349228 TNNI2P48788 182 aa17.19■□□□□ 0.34
TNFSF13-202ENST00000349228 USP11P51784 963 aa17.19■□□□□ 0.34
TNFSF13-202ENST00000349228 DDR1Q08345 913 aa17.19■□□□□ 0.34
TNFSF13-202ENST00000349228 SEPT12Q8IYM1 358 aa17.19■□□□□ 0.34
TNFSF13-202ENST00000349228 DDX12PQ92771 950 aa17.19■□□□□ 0.34
TNFSF13-202ENST00000349228 PNKPQ96T60 521 aa17.19■□□□□ 0.34
TNFSF13-202ENST00000349228 PSTPIP2Q9H939 334 aa17.19■□□□□ 0.34
TNFSF13-202ENST00000349228 RNF216Q9NWF9 866 aaPredicted RBP17.19■□□□□ 0.34
TNFSF13-202ENST00000349228 LTBP1Q14766 1721 aa17.19■□□□□ 0.34
TNFSF13-202ENST00000349228 UBR3Q6ZT12 1888 aa17.19■□□□□ 0.34
TNFSF13-202ENST00000349228 MARCH6O60337 910 aa17.18■□□□□ 0.34
TNFSF13-202ENST00000349228 LCA5LO95447 670 aa17.18■□□□□ 0.34
TNFSF13-202ENST00000349228 GNA14O95837 355 aa17.18■□□□□ 0.34
TNFSF13-202ENST00000349228 SHMT1P34896 483 aa17.18■□□□□ 0.34
TNFSF13-202ENST00000349228 MAP9Q49MG5 647 aa17.18■□□□□ 0.34
TNFSF13-202ENST00000349228 MYOCDQ8IZQ8 938 aa17.18■□□□□ 0.34
TNFSF13-202ENST00000349228 TRIM58Q8NG06 486 aa17.18■□□□□ 0.34
TNFSF13-202ENST00000349228 TEKT1Q969V4 418 aa17.18■□□□□ 0.34
TNFSF13-202ENST00000349228 DDX4Q9NQI0 724 aaKnown RBP17.18■□□□□ 0.34
TNFSF13-202ENST00000349228 PCDHA12Q9UN75 941 aa17.18■□□□□ 0.34
TNFSF13-202ENST00000349228 QSER1Q2KHR3 1735 aa17.18■□□□□ 0.34
TNFSF13-202ENST00000349228 PRLRP16471 622 aa17.18■□□□□ 0.34
TNFSF13-202ENST00000349228 ALDH1B1P30837 517 aa17.18■□□□□ 0.34
TNFSF13-202ENST00000349228 USP14P54578 494 aa17.18■□□□□ 0.34
TNFSF13-202ENST00000349228 MOXD1Q6UVY6 613 aa17.18■□□□□ 0.34
TNFSF13-202ENST00000349228 MKL1Q969V6 931 aa17.18■□□□□ 0.34
TNFSF13-202ENST00000349228 CEP63Q96MT8 703 aa17.18■□□□□ 0.34
TNFSF13-202ENST00000349228 TMX4Q9H1E5 349 aaPredicted RBP17.18■□□□□ 0.34
TNFSF13-202ENST00000349228 DHX36Q9H2U1 1008 aaKnown RBP17.18■□□□□ 0.34
TNFSF13-202ENST00000349228 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.18■□□□□ 0.34
TNFSF13-202ENST00000349228 TRIM10Q9UDY6 481 aa17.18■□□□□ 0.34
TNFSF13-202ENST00000349228 ATF5Q9Y2D1 282 aaPredicted RBP17.18■□□□□ 0.34
TNFSF13-202ENST00000349228 STK24Q9Y6E0 443 aa17.18■□□□□ 0.34
TNFSF13-202ENST00000349228 RHOXF2BP0C7M4 288 aa17.17■□□□□ 0.34
TNFSF13-202ENST00000349228 IDEP14735 1019 aa17.17■□□□□ 0.34
TNFSF13-202ENST00000349228 NPR1P16066 1061 aa17.17■□□□□ 0.34
TNFSF13-202ENST00000349228 FKBP3Q00688 224 aaKnown RBP17.17■□□□□ 0.34
TNFSF13-202ENST00000349228 CCDC96Q2M329 555 aa17.17■□□□□ 0.34
TNFSF13-202ENST00000349228 DYMQ7RTS9 669 aa17.17■□□□□ 0.34
TNFSF13-202ENST00000349228 DCAF4Q8WV16 495 aa17.17■□□□□ 0.34
TNFSF13-202ENST00000349228 BBXQ8WY36 941 aaPredicted RBP17.17■□□□□ 0.34
TNFSF13-202ENST00000349228 RHOXF2Q9BQY4 288 aa17.17■□□□□ 0.34
TNFSF13-202ENST00000349228 ABCB6Q9NP58 842 aa17.17■□□□□ 0.34
TNFSF13-202ENST00000349228 PSD3Q9NYI0 1048 aa17.17■□□□□ 0.34
TNFSF13-202ENST00000349228 TRPC5Q9UL62 973 aaPredicted RBP17.17■□□□□ 0.34
TNFSF13-202ENST00000349228 CYP3A7-CYP3A51PA0A087WV96 503 aa17.16■□□□□ 0.34
TNFSF13-202ENST00000349228 POTEMA6NI47 508 aa17.16■□□□□ 0.34
TNFSF13-202ENST00000349228 RIMBP2O15034 1052 aa17.16■□□□□ 0.34
TNFSF13-202ENST00000349228 POLR3GO15318 223 aaPredicted RBP17.16■□□□□ 0.34
TNFSF13-202ENST00000349228 TACC1O75410 805 aa17.16■□□□□ 0.34
TNFSF13-202ENST00000349228 CYP3A7P24462 503 aa17.16■□□□□ 0.34
TNFSF13-202ENST00000349228 KLK7P49862 253 aa17.16■□□□□ 0.34
TNFSF13-202ENST00000349228 CDC42EP5Q6NZY7 148 aa17.16■□□□□ 0.34
TNFSF13-202ENST00000349228 LRRC55Q6ZSA7 311 aa17.16■□□□□ 0.34
TNFSF13-202ENST00000349228 CCDC65Q8IXS2 484 aa17.16■□□□□ 0.34
TNFSF13-202ENST00000349228 CERS5Q8N5B7 392 aa17.16■□□□□ 0.34
TNFSF13-202ENST00000349228 HAS1Q92839 578 aa17.16■□□□□ 0.34
TNFSF13-202ENST00000349228 JRKLQ9Y4A0 524 aa17.16■□□□□ 0.34
TNFSF13-202ENST00000349228 PPP1R11O60927 126 aaPredicted RBP17.16■□□□□ 0.34
TNFSF13-202ENST00000349228 ATP1A1P05023 1023 aaKnown RBP17.16■□□□□ 0.34
TNFSF13-202ENST00000349228 FKBP1AP62942 108 aaKnown RBP17.16■□□□□ 0.34
TNFSF13-202ENST00000349228 ITIH3Q06033 890 aa17.16■□□□□ 0.34
TNFSF13-202ENST00000349228 MEX3CQ5U5Q3 659 aaKnown RBP17.16■□□□□ 0.34
TNFSF13-202ENST00000349228 NCAPH2Q6IBW4 605 aa17.16■□□□□ 0.34
TNFSF13-202ENST00000349228 RUBCNQ92622 972 aa17.16■□□□□ 0.34
TNFSF13-202ENST00000349228 SYN2Q92777 582 aaPredicted RBP17.16■□□□□ 0.34
TNFSF13-202ENST00000349228 DNAJC19Q96DA6 116 aa17.16■□□□□ 0.34
TNFSF13-202ENST00000349228 VIPAS39Q9H9C1 493 aa17.16■□□□□ 0.34
TNFSF13-202ENST00000349228 NYAP2Q9P242 653 aa17.16■□□□□ 0.34
TNFSF13-202ENST00000349228 SSU72P8A0A1W2PR75 194 aa17.15■□□□□ 0.34
TNFSF13-202ENST00000349228 NPM3O75607 178 aaKnown RBP17.15■□□□□ 0.34
TNFSF13-202ENST00000349228 EIF6P56537 245 aaKnown RBP17.15■□□□□ 0.34
TNFSF13-202ENST00000349228 VSNL1P62760 191 aa17.15■□□□□ 0.34
TNFSF13-202ENST00000349228 AP3B2Q13367 1082 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms