RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 AP1M1Q9BXS5 423 aa19.64■□□□□ 0.74
APP-202ENST00000348990 TRIM31Q9BZY9 425 aa19.64■□□□□ 0.74
APP-202ENST00000348990 ECM29Q5VYK3 1845 aa19.64■□□□□ 0.73
APP-202ENST00000348990 A0A1W2PQJ5 194 aa19.64■□□□□ 0.73
APP-202ENST00000348990 CHUKO15111 745 aa19.64■□□□□ 0.73
APP-202ENST00000348990 ECM2O94769 699 aaPredicted RBP19.64■□□□□ 0.73
APP-202ENST00000348990 MYL1P05976 194 aa19.64■□□□□ 0.73
APP-202ENST00000348990 KIF1AQ12756 1690 aa19.64■□□□□ 0.73
APP-202ENST00000348990 FRMD3A2A2Y4 597 aa19.64■□□□□ 0.73
APP-202ENST00000348990 RAD51CO43502 376 aa19.64■□□□□ 0.73
APP-202ENST00000348990 GLE1Q53GS7 698 aaKnown RBP19.64■□□□□ 0.73
APP-202ENST00000348990 MYH6P13533 1939 aa19.63■□□□□ 0.73
APP-202ENST00000348990 USP17L8P0C7I0 530 aa19.63■□□□□ 0.73
APP-202ENST00000348990 TRHP20396 242 aaPredicted RBP19.63■□□□□ 0.73
APP-202ENST00000348990 IFFO1Q0D2I5 559 aa19.63■□□□□ 0.73
APP-202ENST00000348990 KIAA0895Q8NCT3 520 aa19.63■□□□□ 0.73
APP-202ENST00000348990 FAM212AQ96EL1 285 aa19.63■□□□□ 0.73
APP-202ENST00000348990 DYNLL2Q96FJ2 89 aa19.63■□□□□ 0.73
APP-202ENST00000348990 LSM14BQ9BX40 385 aaKnown RBP19.63■□□□□ 0.73
APP-202ENST00000348990 TJP1Q07157 1748 aa19.63■□□□□ 0.73
APP-202ENST00000348990 MYH2Q9UKX2 1941 aa19.63■□□□□ 0.73
APP-202ENST00000348990 USP17L3A6NCW0 530 aa19.63■□□□□ 0.73
APP-202ENST00000348990 USP17L4A6NCW7 530 aa19.63■□□□□ 0.73
APP-202ENST00000348990 KLRC1P26715 233 aa19.63■□□□□ 0.73
APP-202ENST00000348990 CDK17Q00537 523 aa19.63■□□□□ 0.73
APP-202ENST00000348990 ITIH3Q06033 890 aa19.63■□□□□ 0.73
APP-202ENST00000348990 USP17L1Q7RTZ2 530 aa19.63■□□□□ 0.73
APP-202ENST00000348990 DNAAF5Q86Y56 855 aa19.63■□□□□ 0.73
APP-202ENST00000348990 NELFCDQ8IXH7 590 aa19.63■□□□□ 0.73
APP-202ENST00000348990 BRIP1Q9BX63 1249 aa19.63■□□□□ 0.73
APP-202ENST00000348990 TFCP2L1Q9NZI6 479 aa19.63■□□□□ 0.73
APP-202ENST00000348990 TSKSQ9UJT2 592 aa19.63■□□□□ 0.73
APP-202ENST00000348990 CYP19A1P11511 503 aaPredicted RBP19.63■□□□□ 0.73
APP-202ENST00000348990 BICDL1Q6ZP65 573 aa19.63■□□□□ 0.73
APP-202ENST00000348990 BIN2Q9UBW5 565 aaPredicted RBP19.63■□□□□ 0.73
APP-202ENST00000348990 HMGB1P1B2RPK0 211 aaPredicted RBP19.62■□□□□ 0.73
APP-202ENST00000348990 KLHL30Q0D2K2 578 aa19.62■□□□□ 0.73
APP-202ENST00000348990 N4BP2L2Q92802 583 aaPredicted RBP19.62■□□□□ 0.73
APP-202ENST00000348990 PHRF1Q9P1Y6 1649 aaKnown RBP19.62■□□□□ 0.73
APP-202ENST00000348990 FSBPO95073 299 aa19.62■□□□□ 0.73
APP-202ENST00000348990 TSPY3P0CV98 308 aa19.62■□□□□ 0.73
APP-202ENST00000348990 TSPY8P0CW00 308 aa19.62■□□□□ 0.73
APP-202ENST00000348990 RPS6KA1Q15418 735 aa19.62■□□□□ 0.73
APP-202ENST00000348990 CYFIP2Q96F07 1278 aa19.62■□□□□ 0.73
APP-202ENST00000348990 SLC40A1Q9NP59 571 aa19.62■□□□□ 0.73
APP-202ENST00000348990 DCP1AQ9NPI6 582 aaPredicted RBP19.62■□□□□ 0.73
APP-202ENST00000348990 ODF2LQ9ULJ1 636 aa19.62■□□□□ 0.73
APP-202ENST00000348990 ADAMTS7Q9UKP4 1686 aa19.62■□□□□ 0.73
APP-202ENST00000348990 MYH13Q9UKX3 1938 aa19.62■□□□□ 0.73
APP-202ENST00000348990 SMIM23A6NLE4 172 aa19.61■□□□□ 0.73
APP-202ENST00000348990 NONOQ15233 471 aaKnown RBP eCLIP19.61■□□□□ 0.73
APP-202ENST00000348990 FIGNQ5HY92 759 aa19.61■□□□□ 0.73
APP-202ENST00000348990 PDXDC1Q6P996 788 aa19.61■□□□□ 0.73
APP-202ENST00000348990 NOVA2Q9UNW9 492 aaKnown RBP19.61■□□□□ 0.73
APP-202ENST00000348990 SIK3Q9Y2K2 1263 aa19.61■□□□□ 0.73
APP-202ENST00000348990 FAM107AO95990 144 aa19.61■□□□□ 0.73
APP-202ENST00000348990 FNTAP49354 379 aa19.61■□□□□ 0.73
APP-202ENST00000348990 ZNF444Q8N0Y2 327 aaPredicted RBP19.61■□□□□ 0.73
APP-202ENST00000348990 FAM133AQ8N9E0 248 aa19.61■□□□□ 0.73
APP-202ENST00000348990 WHAMMQ8TF30 809 aa19.61■□□□□ 0.73
APP-202ENST00000348990 PACSIN1Q9BY11 444 aa19.61■□□□□ 0.73
APP-202ENST00000348990 GOPCQ9HD26 462 aa19.61■□□□□ 0.73
APP-202ENST00000348990 SUFUQ9UMX1 484 aa19.61■□□□□ 0.73
APP-202ENST00000348990 SMCO2A6NFE2 343 aa19.61■□□□□ 0.73
APP-202ENST00000348990 NKX1-1Q15270 411 aaPredicted RBP19.61■□□□□ 0.73
APP-202ENST00000348990 RUBCNQ92622 972 aa19.61■□□□□ 0.73
APP-202ENST00000348990 NEDD9Q14511 834 aa19.6■□□□□ 0.73
APP-202ENST00000348990 KRT71Q3SY84 523 aa19.6■□□□□ 0.73
APP-202ENST00000348990 BANK1Q8NDB2 785 aa19.6■□□□□ 0.73
APP-202ENST00000348990 ZKSCAN4Q969J2 545 aaPredicted RBP19.6■□□□□ 0.73
APP-202ENST00000348990 HAUS2Q9NVX0 235 aa19.6■□□□□ 0.73
APP-202ENST00000348990 GMNCA6NCL1 334 aa19.6■□□□□ 0.73
APP-202ENST00000348990 PPP1R2P41236 205 aa19.6■□□□□ 0.73
APP-202ENST00000348990 FAM83BQ5T0W9 1011 aa19.6■□□□□ 0.73
APP-202ENST00000348990 ZSCAN29Q8IWY8 852 aaPredicted RBP19.6■□□□□ 0.73
APP-202ENST00000348990 GLIS3Q8NEA6 775 aa19.6■□□□□ 0.73
APP-202ENST00000348990 DPH5Q9H2P9 285 aa19.6■□□□□ 0.73
APP-202ENST00000348990 CUEDC2Q9H467 287 aa19.6■□□□□ 0.73
APP-202ENST00000348990 GDF3Q9NR23 364 aa19.6■□□□□ 0.73
APP-202ENST00000348990 TLDC2A0PJX2 215 aa19.6■□□□□ 0.73
APP-202ENST00000348990 MYMKA6NI61 221 aa19.6■□□□□ 0.73
APP-202ENST00000348990 RPSAP08865 295 aaKnown RBP19.6■□□□□ 0.73
APP-202ENST00000348990 PDHBP11177 359 aa19.6■□□□□ 0.73
APP-202ENST00000348990 MECOMQ03112 1051 aa19.6■□□□□ 0.73
APP-202ENST00000348990 PRPF4BQ13523 1007 aaKnown RBP19.6■□□□□ 0.73
APP-202ENST00000348990 VCPKMTQ9H867 229 aa19.6■□□□□ 0.73
APP-202ENST00000348990 SNCBQ16143 134 aa19.59■□□□□ 0.73
APP-202ENST00000348990 RNF10Q8N5U6 811 aaKnown RBP19.59■□□□□ 0.73
APP-202ENST00000348990 IQCDQ96DY2 449 aa19.59■□□□□ 0.73
APP-202ENST00000348990 C7orf25Q9BPX7 421 aa19.59■□□□□ 0.73
APP-202ENST00000348990 DDX47Q9H0S4 455 aaKnown RBP19.59■□□□□ 0.73
APP-202ENST00000348990 GNAQP50148 359 aa19.59■□□□□ 0.73
APP-202ENST00000348990 DZIP1Q86YF9 867 aaKnown RBP19.59■□□□□ 0.73
APP-202ENST00000348990 CACNA2D3Q8IZS8 1091 aa19.59■□□□□ 0.73
APP-202ENST00000348990 SPAG5Q96R06 1193 aa19.59■□□□□ 0.73
APP-202ENST00000348990 RNF14Q9UBS8 474 aa19.59■□□□□ 0.73
APP-202ENST00000348990 PRDX5P30044 214 aa19.58■□□□□ 0.73
APP-202ENST00000348990 GSCP56915 257 aaPredicted RBP19.58■□□□□ 0.73
APP-202ENST00000348990 CDC37Q16543 378 aaPredicted RBP19.58■□□□□ 0.73
APP-202ENST00000348990 EP400NLQ6ZTU2 488 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms