RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 AP1ARQ63HQ0 302 aa11.39□□□□□ -0.59
CHRNA1-202ENST00000348749 MSL1Q68DK7 614 aa11.39□□□□□ -0.59
CHRNA1-202ENST00000348749 TMTC3Q6ZXV5 915 aa11.39□□□□□ -0.59
CHRNA1-202ENST00000348749 SMCR8Q8TEV9 937 aaPredicted RBP11.39□□□□□ -0.59
CHRNA1-202ENST00000348749 CCDC47Q96A33 483 aaKnown RBP11.39□□□□□ -0.59
CHRNA1-202ENST00000348749 HVCN1Q96D96 273 aa11.39□□□□□ -0.59
CHRNA1-202ENST00000348749 CCDC42Q96M95 316 aa11.39□□□□□ -0.59
CHRNA1-202ENST00000348749 MTRQ99707 1265 aa11.39□□□□□ -0.59
CHRNA1-202ENST00000348749 IFIH1Q9BYX4 1025 aaKnown RBP11.39□□□□□ -0.59
CHRNA1-202ENST00000348749 EPB41L5Q9HCM4 733 aa11.39□□□□□ -0.59
CHRNA1-202ENST00000348749 BSDC1Q9NW68 430 aaPredicted RBP11.39□□□□□ -0.59
CHRNA1-202ENST00000348749 MAGEC2Q9UBF1 373 aaPredicted RBP11.39□□□□□ -0.59
CHRNA1-202ENST00000348749 PCDHA13Q9Y5I0 950 aa11.39□□□□□ -0.59
CHRNA1-202ENST00000348749 GRID2IPA4D2P6 1211 aa11.39□□□□□ -0.59
CHRNA1-202ENST00000348749 PJA2O43164 708 aa11.39□□□□□ -0.59
CHRNA1-202ENST00000348749 RPSAP08865 295 aaKnown RBP11.39□□□□□ -0.59
CHRNA1-202ENST00000348749 CYP19A1P11511 503 aaPredicted RBP11.39□□□□□ -0.59
CHRNA1-202ENST00000348749 CALML3P27482 149 aa11.39□□□□□ -0.59
CHRNA1-202ENST00000348749 PTGDRQ13258 359 aa11.39□□□□□ -0.59
CHRNA1-202ENST00000348749 IFIT1BQ5T764 474 aaKnown RBP11.39□□□□□ -0.59
CHRNA1-202ENST00000348749 AGBL2Q5U5Z8 902 aa11.39□□□□□ -0.59
CHRNA1-202ENST00000348749 ENAHQ8N8S7 591 aaPredicted RBP11.39□□□□□ -0.59
CHRNA1-202ENST00000348749 ZKSCAN3Q9BRR0 538 aa11.39□□□□□ -0.59
CHRNA1-202ENST00000348749 MLXIPQ9HAP2 919 aa11.39□□□□□ -0.59
CHRNA1-202ENST00000348749 MAGEF1Q9HAY2 307 aa11.39□□□□□ -0.59
CHRNA1-202ENST00000348749 C15orf41Q9Y2V0 281 aa11.39□□□□□ -0.59
CHRNA1-202ENST00000348749 ZNF330Q9Y3S2 320 aaPredicted RBP11.39□□□□□ -0.59
CHRNA1-202ENST00000348749 STRCP1A6NGW2 1772 aa11.38□□□□□ -0.59
CHRNA1-202ENST00000348749 GCOM1H8Y6P7 765 aaPredicted RBP11.38□□□□□ -0.59
CHRNA1-202ENST00000348749 LIN7AO14910 233 aaPredicted RBP11.38□□□□□ -0.59
CHRNA1-202ENST00000348749 PRKAB2O43741 272 aa11.38□□□□□ -0.59
CHRNA1-202ENST00000348749 BUB1BO60566 1050 aaPredicted RBP11.38□□□□□ -0.59
CHRNA1-202ENST00000348749 MYZAPP0CAP1 466 aa11.38□□□□□ -0.59
CHRNA1-202ENST00000348749 HOXA7P31268 230 aaPredicted RBP11.38□□□□□ -0.59
CHRNA1-202ENST00000348749 GUCY2DQ02846 1103 aa11.38□□□□□ -0.59
CHRNA1-202ENST00000348749 TROAPQ12815 778 aa11.38□□□□□ -0.59
CHRNA1-202ENST00000348749 NPY5RQ15761 445 aa11.38□□□□□ -0.59
CHRNA1-202ENST00000348749 ACCSLQ4AC99 568 aa11.38□□□□□ -0.59
CHRNA1-202ENST00000348749 GKAP1Q5VSY0 366 aaPredicted RBP11.38□□□□□ -0.59
CHRNA1-202ENST00000348749 RUFY4Q6ZNE9 571 aa11.38□□□□□ -0.59
CHRNA1-202ENST00000348749 MAATS1Q7Z4T9 603 aa11.38□□□□□ -0.59
CHRNA1-202ENST00000348749 SYNE4Q8N205 404 aa11.38□□□□□ -0.59
CHRNA1-202ENST00000348749 NSMCE1Q8WV22 266 aa11.38□□□□□ -0.59
CHRNA1-202ENST00000348749 LMBR1Q8WVP7 490 aa11.38□□□□□ -0.59
CHRNA1-202ENST00000348749 CASKIN2Q8WXE0 1202 aa11.38□□□□□ -0.59
CHRNA1-202ENST00000348749 STAMQ92783 540 aa11.38□□□□□ -0.59
CHRNA1-202ENST00000348749 SHISA4Q96DD7 197 aa11.38□□□□□ -0.59
CHRNA1-202ENST00000348749 ERGIC2Q96RQ1 377 aa11.38□□□□□ -0.59
CHRNA1-202ENST00000348749 TLR10Q9BXR5 811 aa11.38□□□□□ -0.59
CHRNA1-202ENST00000348749 CUEDC2Q9H467 287 aa11.38□□□□□ -0.59
CHRNA1-202ENST00000348749 TAF1DQ9H5J8 278 aaPredicted RBP11.38□□□□□ -0.59
CHRNA1-202ENST00000348749 SH3GLB2Q9NR46 395 aa11.38□□□□□ -0.59
CHRNA1-202ENST00000348749 ETAA1Q9NY74 926 aa11.38□□□□□ -0.59
CHRNA1-202ENST00000348749 SMARCAL1Q9NZC9 954 aa11.38□□□□□ -0.59
CHRNA1-202ENST00000348749 EHD2Q9NZN4 543 aa11.38□□□□□ -0.59
CHRNA1-202ENST00000348749 TRPC6Q9Y210 931 aa11.38□□□□□ -0.59
CHRNA1-202ENST00000348749 GDAQ9Y2T3 454 aa11.38□□□□□ -0.59
CHRNA1-202ENST00000348749 MYH10P35580 1976 aa11.38□□□□□ -0.59
CHRNA1-202ENST00000348749 MAGEB6P1A0A0J9YX57 407 aa11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 TRIM49BA6NDI0 452 aa11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 B4DLN1 442 aa11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 H0YGN5 161 aa11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 ORC4O43929 436 aa11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 MYBP10242 640 aa11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 HPDP32754 393 aaPredicted RBP11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 BZW1Q7L1Q6 419 aaKnown RBP11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 CCDC82Q8N4S0 544 aa11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 TCP11Q8WWU5 503 aa11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 PIGBQ92521 554 aa11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 DDX17Q92841 729 aaKnown RBP11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 SPDL1Q96EA4 605 aa11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 SAAL1Q96ER3 474 aa11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 LRP2BPQ9P2M1 347 aa11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 PLAGL2Q9UPG8 496 aa11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 NFS1Q9Y697 457 aa11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 V9GY48 417 aaPredicted RBP11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 CNTNAP5Q8WYK1 1306 aa11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 FAM205CA6NFA0 338 aa11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 PES1O00541 588 aaKnown RBP11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 CXCR5P32302 372 aa11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 GUCY2FP51841 1108 aa11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 RWDD2BP57060 319 aa11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 PPP2R2AP63151 447 aa11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 ZNF174Q15697 407 aa11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 CCDC152Q4G0S7 254 aa11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 PARP10Q53GL7 1025 aa11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 KLHDC7AQ5VTJ3 777 aa11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 KRT26Q7Z3Y9 468 aa11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 KIRREL3Q8IZU9 778 aa11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 RNF10Q8N5U6 811 aaKnown RBP11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 IFT81Q8WYA0 676 aa11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 RAPGEF5Q92565 580 aa11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 STAMBPL1Q96FJ0 436 aa11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 SPAG5Q96R06 1193 aa11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 TUBGCP2Q9BSJ2 902 aa11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 KIF9Q9HAQ2 790 aa11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 SLC39A2Q9NP94 309 aa11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 ASAP1Q9ULH1 1129 aa11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 ZNF804BA4D1E1 1349 aa11.37□□□□□ -0.59
CHRNA1-202ENST00000348749 EME2A4GXA9 379 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms