RNA–Protein interactions for RNA: ENST00000347401.7

COL6A3-202, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-202ENST00000347401 FAM129AQ9BZQ8 928 aa14.38□□□□□ -0.11
COL6A3-202ENST00000347401 PANK4Q9NVE7 773 aa14.38□□□□□ -0.11
COL6A3-202ENST00000347401 USTQ9Y2C2 406 aa14.38□□□□□ -0.11
COL6A3-202ENST00000347401 V9GY48 417 aaPredicted RBP14.38□□□□□ -0.11
COL6A3-202ENST00000347401 AKNAD1Q5T1N1 836 aa14.38□□□□□ -0.11
COL6A3-202ENST00000347401 FAM186BQ8IYM0 893 aa14.38□□□□□ -0.11
COL6A3-202ENST00000347401 OSBPL9Q96SU4 736 aa14.38□□□□□ -0.11
COL6A3-202ENST00000347401 CDC42BPAQ5VT25 1732 aa14.38□□□□□ -0.11
COL6A3-202ENST00000347401 TFAP4Q01664 338 aa14.38□□□□□ -0.11
COL6A3-202ENST00000347401 PROM2Q8N271 834 aa14.38□□□□□ -0.11
COL6A3-202ENST00000347401 BLOC1S6Q9UL45 172 aa14.38□□□□□ -0.11
COL6A3-202ENST00000347401 B4E1Z4 1266 aa14.37□□□□□ -0.11
COL6A3-202ENST00000347401 DEAF1O75398 565 aaPredicted RBP14.37□□□□□ -0.11
COL6A3-202ENST00000347401 PAMP19021 973 aa14.37□□□□□ -0.11
COL6A3-202ENST00000347401 MRRFQ96E11 262 aaKnown RBP14.37□□□□□ -0.11
COL6A3-202ENST00000347401 BRIP1Q9BX63 1249 aa14.37□□□□□ -0.11
COL6A3-202ENST00000347401 DNAJC17Q9NVM6 304 aaKnown RBP14.37□□□□□ -0.11
COL6A3-202ENST00000347401 PLB1Q6P1J6 1458 aa14.37□□□□□ -0.11
COL6A3-202ENST00000347401 TYW5A2RUC4 315 aaKnown RBP14.37□□□□□ -0.11
COL6A3-202ENST00000347401 HGSO14964 777 aaPredicted RBP14.37□□□□□ -0.11
COL6A3-202ENST00000347401 RCN2Q14257 317 aa14.37□□□□□ -0.11
COL6A3-202ENST00000347401 GNPTABQ3T906 1256 aa14.37□□□□□ -0.11
COL6A3-202ENST00000347401 TBC1D23Q9NUY8 699 aa14.37□□□□□ -0.11
COL6A3-202ENST00000347401 HESX1Q9UBX0 185 aa14.37□□□□□ -0.11
COL6A3-202ENST00000347401 SNX5Q9Y5X3 404 aa14.37□□□□□ -0.11
COL6A3-202ENST00000347401 A2MP01023 1474 aa14.37□□□□□ -0.11
COL6A3-202ENST00000347401 SCG2P13521 617 aa14.37□□□□□ -0.11
COL6A3-202ENST00000347401 CHST3Q7LGC8 479 aa14.37□□□□□ -0.11
COL6A3-202ENST00000347401 MXD3Q9BW11 206 aa14.37□□□□□ -0.11
COL6A3-202ENST00000347401 CARMIL3Q8ND23 1372 aa14.37□□□□□ -0.11
COL6A3-202ENST00000347401 GSTA4O15217 222 aa14.37□□□□□ -0.11
COL6A3-202ENST00000347401 TXKP42681 527 aa14.37□□□□□ -0.11
COL6A3-202ENST00000347401 GRIN1Q05586 938 aa14.37□□□□□ -0.11
COL6A3-202ENST00000347401 PLS1Q14651 629 aa14.37□□□□□ -0.11
COL6A3-202ENST00000347401 BLIDQ8IZY5 108 aa14.37□□□□□ -0.11
COL6A3-202ENST00000347401 PICK1Q9NRD5 415 aa14.37□□□□□ -0.11
COL6A3-202ENST00000347401 FANCLQ9NW38 375 aa14.37□□□□□ -0.11
COL6A3-202ENST00000347401 E7EWF7 191 aa14.37□□□□□ -0.11
COL6A3-202ENST00000347401 H0Y626 953 aa14.37□□□□□ -0.11
COL6A3-202ENST00000347401 TRIM16O95361 564 aa14.37□□□□□ -0.11
COL6A3-202ENST00000347401 EHHADHQ08426 723 aa14.37□□□□□ -0.11
COL6A3-202ENST00000347401 WAPLQ7Z5K2 1190 aa14.37□□□□□ -0.11
COL6A3-202ENST00000347401 WDR62O43379 1518 aa14.37□□□□□ -0.11
COL6A3-202ENST00000347401 SLC39A14Q15043 492 aa14.37□□□□□ -0.11
COL6A3-202ENST00000347401 MIGA1Q8NAN2 632 aa14.37□□□□□ -0.11
COL6A3-202ENST00000347401 CACTINQ8WUQ7 758 aaKnown RBP14.37□□□□□ -0.11
COL6A3-202ENST00000347401 MORC2Q9Y6X9 1032 aaPredicted RBP14.37□□□□□ -0.11
COL6A3-202ENST00000347401 MYOM2P54296 1465 aa14.37□□□□□ -0.11
COL6A3-202ENST00000347401 GOLGA8JA6NMD2 632 aa14.37□□□□□ -0.11
COL6A3-202ENST00000347401 HNRNPCL2B2RXH8 293 aa14.37□□□□□ -0.11
COL6A3-202ENST00000347401 RFX1P22670 979 aa14.37□□□□□ -0.11
COL6A3-202ENST00000347401 CA8P35219 290 aa14.37□□□□□ -0.11
COL6A3-202ENST00000347401 DHX9Q08211 1270 aaKnown RBP14.37□□□□□ -0.11
COL6A3-202ENST00000347401 LZICQ8WZA0 190 aa14.37□□□□□ -0.11
COL6A3-202ENST00000347401 TLK1Q9UKI8 766 aa14.37□□□□□ -0.11
COL6A3-202ENST00000347401 SGK1O00141 431 aa14.36□□□□□ -0.11
COL6A3-202ENST00000347401 CCDC22O60826 627 aa14.36□□□□□ -0.11
COL6A3-202ENST00000347401 ORC2Q13416 577 aaPredicted RBP14.36□□□□□ -0.11
COL6A3-202ENST00000347401 RNF26Q9BY78 433 aaPredicted RBP14.36□□□□□ -0.11
COL6A3-202ENST00000347401 ADGRF5Q8IZF2 1346 aa14.36□□□□□ -0.11
COL6A3-202ENST00000347401 FAM83GA6ND36 823 aa14.36□□□□□ -0.11
COL6A3-202ENST00000347401 XPOTO43592 962 aaKnown RBP14.36□□□□□ -0.11
COL6A3-202ENST00000347401 FOSP01100 380 aaPredicted RBP14.36□□□□□ -0.11
COL6A3-202ENST00000347401 MT-ND3P03897 115 aa14.36□□□□□ -0.11
COL6A3-202ENST00000347401 PTPREP23469 700 aa14.36□□□□□ -0.11
COL6A3-202ENST00000347401 DR1Q01658 176 aa14.36□□□□□ -0.11
COL6A3-202ENST00000347401 ZBTB8OSQ8IWT0 167 aa14.36□□□□□ -0.11
COL6A3-202ENST00000347401 POLKQ9UBT6 870 aa14.36□□□□□ -0.11
COL6A3-202ENST00000347401 M0QZ92 97 aa14.36□□□□□ -0.11
COL6A3-202ENST00000347401 CCDC159P0C7I6 412 aa14.36□□□□□ -0.11
COL6A3-202ENST00000347401 GPT2Q8TD30 523 aa14.36□□□□□ -0.11
COL6A3-202ENST00000347401 PITPNM3Q9BZ71 974 aa14.36□□□□□ -0.11
COL6A3-202ENST00000347401 ABCC10Q5T3U5 1492 aa14.36□□□□□ -0.11
COL6A3-202ENST00000347401 ESYT2A0FGR8 921 aa14.36□□□□□ -0.11
COL6A3-202ENST00000347401 KRT38O76015 456 aa14.36□□□□□ -0.11
COL6A3-202ENST00000347401 STAT2P52630 851 aa14.36□□□□□ -0.11
COL6A3-202ENST00000347401 ME3Q16798 604 aa14.36□□□□□ -0.11
COL6A3-202ENST00000347401 KCTD16Q68DU8 428 aa14.36□□□□□ -0.11
COL6A3-202ENST00000347401 GPBP1Q86WP2 473 aa14.36□□□□□ -0.11
COL6A3-202ENST00000347401 DESI2Q9BSY9 194 aa14.36□□□□□ -0.11
COL6A3-202ENST00000347401 FAM133BQ5BKY9 247 aaKnown RBP14.36□□□□□ -0.11
COL6A3-202ENST00000347401 RAPH1Q70E73 1250 aa14.36□□□□□ -0.11
COL6A3-202ENST00000347401 VSTM4Q8IW00 320 aa14.36□□□□□ -0.11
COL6A3-202ENST00000347401 C17orf53Q8N3J3 647 aaPredicted RBP14.36□□□□□ -0.11
COL6A3-202ENST00000347401 SYT2Q8N9I0 419 aaPredicted RBP14.36□□□□□ -0.11
COL6A3-202ENST00000347401 CDCA7Q9BWT1 371 aaPredicted RBP14.36□□□□□ -0.11
COL6A3-202ENST00000347401 MAPK8IP1Q9UQF2 711 aa14.36□□□□□ -0.11
COL6A3-202ENST00000347401 ATP8A1Q9Y2Q0 1164 aa14.36□□□□□ -0.11
COL6A3-202ENST00000347401 GMNCA6NCL1 334 aa14.36□□□□□ -0.11
COL6A3-202ENST00000347401 TJP3O95049 919 aa14.36□□□□□ -0.11
COL6A3-202ENST00000347401 TAC1P20366 129 aa14.36□□□□□ -0.11
COL6A3-202ENST00000347401 MED21Q13503 144 aa14.36□□□□□ -0.11
COL6A3-202ENST00000347401 IQCB1Q15051 598 aa14.36□□□□□ -0.11
COL6A3-202ENST00000347401 ZNF658Q5TYW1 1059 aaPredicted RBP14.36□□□□□ -0.11
COL6A3-202ENST00000347401 SKAP1Q86WV1 359 aa14.36□□□□□ -0.11
COL6A3-202ENST00000347401 C3orf20Q8ND61 904 aa14.36□□□□□ -0.11
COL6A3-202ENST00000347401 GOLGA8IPA6NC78 632 aa14.36□□□□□ -0.11
COL6A3-202ENST00000347401 CD19P15391 556 aa14.36□□□□□ -0.11
COL6A3-202ENST00000347401 ZNF212Q9UDV6 495 aa14.36□□□□□ -0.11
COL6A3-202ENST00000347401 APOBEC2Q9Y235 224 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms