RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 PPP1R3GB7ZBB8 358 aa14.76□□□□□ -0.05
CASC4-202ENST00000345795 NR2F2P24468 414 aa14.76□□□□□ -0.05
CASC4-202ENST00000345795 ERCC5P28715 1186 aaPredicted RBP14.76□□□□□ -0.05
CASC4-202ENST00000345795 GOLGA8IPA6NC78 632 aa14.75□□□□□ -0.05
CASC4-202ENST00000345795 GOLGA8JA6NMD2 632 aa14.75□□□□□ -0.05
CASC4-202ENST00000345795 PLA2G4BP0C869 781 aa14.75□□□□□ -0.05
CASC4-202ENST00000345795 DPEP1P16444 411 aa14.75□□□□□ -0.05
CASC4-202ENST00000345795 ARHGAP27Q6ZUM4 889 aa14.75□□□□□ -0.05
CASC4-202ENST00000345795 MTRQ99707 1265 aa14.75□□□□□ -0.05
CASC4-202ENST00000345795 LZTS2Q9BRK4 669 aa14.75□□□□□ -0.05
CASC4-202ENST00000345795 IFIH1Q9BYX4 1025 aaKnown RBP14.75□□□□□ -0.05
CASC4-202ENST00000345795 ARFGAP3Q9NP61 516 aa14.75□□□□□ -0.05
CASC4-202ENST00000345795 BCCIPQ9P287 314 aaKnown RBP eCLIP14.75□□□□□ -0.05
CASC4-202ENST00000345795 ARHGAP4P98171 946 aa14.75□□□□□ -0.05
CASC4-202ENST00000345795 LRCH2Q5VUJ6 765 aa14.75□□□□□ -0.05
CASC4-202ENST00000345795 FAM114A1Q8IWE2 563 aa14.75□□□□□ -0.05
CASC4-202ENST00000345795 PURBQ96QR8 312 aaKnown RBP14.75□□□□□ -0.05
CASC4-202ENST00000345795 BCAS3Q9H6U6 928 aa14.75□□□□□ -0.05
CASC4-202ENST00000345795 SUGCTQ9HAC7 445 aa14.75□□□□□ -0.05
CASC4-202ENST00000345795 TMEM150BA6NC51 233 aa14.75□□□□□ -0.05
CASC4-202ENST00000345795 PALM3A6NDB9 673 aaPredicted RBP14.75□□□□□ -0.05
CASC4-202ENST00000345795 RSPH10B2B2RC85 870 aa14.75□□□□□ -0.05
CASC4-202ENST00000345795 PEX10O60683 326 aa14.75□□□□□ -0.05
CASC4-202ENST00000345795 RSPH10BP0C881 870 aa14.75□□□□□ -0.05
CASC4-202ENST00000345795 MAGEA1P43355 309 aa14.75□□□□□ -0.05
CASC4-202ENST00000345795 STAT2P52630 851 aa14.75□□□□□ -0.05
CASC4-202ENST00000345795 R3HDM1Q15032 1099 aaKnown RBP14.75□□□□□ -0.05
CASC4-202ENST00000345795 SYDE2Q5VT97 1194 aa14.75□□□□□ -0.05
CASC4-202ENST00000345795 PODNQ7Z5L7 613 aa14.75□□□□□ -0.05
CASC4-202ENST00000345795 FAM133AQ8N9E0 248 aa14.75□□□□□ -0.05
CASC4-202ENST00000345795 TCHPQ9BT92 498 aa14.75□□□□□ -0.05
CASC4-202ENST00000345795 RNF225M0QZC1 329 aaPredicted RBP14.74□□□□□ -0.05
CASC4-202ENST00000345795 MFAP3LO75121 409 aa14.74□□□□□ -0.05
CASC4-202ENST00000345795 GYPCP04921 128 aa14.74□□□□□ -0.05
CASC4-202ENST00000345795 ADRA2BP18089 450 aa14.74□□□□□ -0.05
CASC4-202ENST00000345795 TRAPPC10P48553 1259 aa14.74□□□□□ -0.05
CASC4-202ENST00000345795 SPP2Q13103 211 aa14.74□□□□□ -0.05
CASC4-202ENST00000345795 APOBEC3HQ6NTF7 200 aaKnown RBP14.74□□□□□ -0.05
CASC4-202ENST00000345795 TRIML1Q8N9V2 468 aa14.74□□□□□ -0.05
CASC4-202ENST00000345795 USP20Q9Y2K6 914 aa14.74□□□□□ -0.05
CASC4-202ENST00000345795 NCK2O43639 380 aa14.74□□□□□ -0.05
CASC4-202ENST00000345795 KRT86O43790 486 aa14.74□□□□□ -0.05
CASC4-202ENST00000345795 CDC25BP30305 580 aa14.74□□□□□ -0.05
CASC4-202ENST00000345795 SLC7A5Q01650 507 aa14.74□□□□□ -0.05
CASC4-202ENST00000345795 GPATCH4Q5T3I0 446 aaKnown RBP14.74□□□□□ -0.05
CASC4-202ENST00000345795 PYM1Q9BRP8 204 aaKnown RBP14.74□□□□□ -0.05
CASC4-202ENST00000345795 ADAMTS1Q9UHI8 967 aa14.74□□□□□ -0.05
CASC4-202ENST00000345795 STRCP1A6NGW2 1772 aa14.74□□□□□ -0.05
CASC4-202ENST00000345795 ARHGEF35A5YM69 484 aa14.74□□□□□ -0.05
CASC4-202ENST00000345795 H7C1D1 291 aa14.74□□□□□ -0.05
CASC4-202ENST00000345795 FTCDO95954 541 aa14.74□□□□□ -0.05
CASC4-202ENST00000345795 SSTR3P32745 418 aaPredicted RBP14.74□□□□□ -0.05
CASC4-202ENST00000345795 PSMC6P62333 389 aa14.74□□□□□ -0.05
CASC4-202ENST00000345795 KLHL7Q8IXQ5 586 aa14.74□□□□□ -0.05
CASC4-202ENST00000345795 HOOK2Q96ED9 719 aa14.74□□□□□ -0.05
CASC4-202ENST00000345795 MLXIPQ9HAP2 919 aa14.74□□□□□ -0.05
CASC4-202ENST00000345795 SMIM23A6NLE4 172 aa14.73□□□□□ -0.05
CASC4-202ENST00000345795 ZNF185O15231 689 aa14.73□□□□□ -0.05
CASC4-202ENST00000345795 STX10O60499 249 aa14.73□□□□□ -0.05
CASC4-202ENST00000345795 EXOC3O60645 756 aa14.73□□□□□ -0.05
CASC4-202ENST00000345795 ACTN1P12814 892 aa14.73□□□□□ -0.05
CASC4-202ENST00000345795 SHMT1P34896 483 aa14.73□□□□□ -0.05
CASC4-202ENST00000345795 GOLGA1Q92805 767 aa14.73□□□□□ -0.05
CASC4-202ENST00000345795 AGBL1Q96MI9 1066 aa14.73□□□□□ -0.05
CASC4-202ENST00000345795 EHD2Q9NZN4 543 aa14.73□□□□□ -0.05
CASC4-202ENST00000345795 DISP2A7MBM2 1401 aa14.73□□□□□ -0.05
CASC4-202ENST00000345795 SCN11AQ9UI33 1791 aa14.73□□□□□ -0.05
CASC4-202ENST00000345795 CETN3O15182 167 aa14.73□□□□□ -0.05
CASC4-202ENST00000345795 MOCS3O95396 460 aa14.73□□□□□ -0.05
CASC4-202ENST00000345795 SLC27A3Q5K4L6 730 aa14.73□□□□□ -0.05
CASC4-202ENST00000345795 SFR1Q86XK3 245 aa14.73□□□□□ -0.05
CASC4-202ENST00000345795 ZNF579Q8NAF0 562 aaKnown RBP14.73□□□□□ -0.05
CASC4-202ENST00000345795 NAPGQ99747 312 aaPredicted RBP14.73□□□□□ -0.05
CASC4-202ENST00000345795 CLEC11AQ9Y240 323 aa14.73□□□□□ -0.05
CASC4-202ENST00000345795 ARFGEF2Q9Y6D5 1785 aa14.73□□□□□ -0.05
CASC4-202ENST00000345795 NKRFO15226 690 aaKnown RBP eCLIP14.73□□□□□ -0.05
CASC4-202ENST00000345795 BAG6P46379 1132 aa14.73□□□□□ -0.05
CASC4-202ENST00000345795 ZC2HC1CQ53FD0 456 aaPredicted RBP14.73□□□□□ -0.05
CASC4-202ENST00000345795 ODR4Q5SWX8 454 aa14.73□□□□□ -0.05
CASC4-202ENST00000345795 GOPCQ9HD26 462 aa14.73□□□□□ -0.05
CASC4-202ENST00000345795 ABHD10Q9NUJ1 306 aa14.73□□□□□ -0.05
CASC4-202ENST00000345795 GPS2Q13227 327 aa14.72□□□□□ -0.05
CASC4-202ENST00000345795 MED15Q96RN5 788 aa14.72□□□□□ -0.05
CASC4-202ENST00000345795 CRAMP1Q96RY5 1269 aa14.72□□□□□ -0.05
CASC4-202ENST00000345795 VPS18Q9P253 973 aa14.72□□□□□ -0.05
CASC4-202ENST00000345795 ADD3Q9UEY8 706 aaKnown RBP14.72□□□□□ -0.05
CASC4-202ENST00000345795 RWDD2AQ9UIY3 292 aa14.72□□□□□ -0.05
CASC4-202ENST00000345795 PPP1R12BO60237 982 aaPredicted RBP14.72□□□□□ -0.05
CASC4-202ENST00000345795 POLD1P28340 1107 aa14.72□□□□□ -0.05
CASC4-202ENST00000345795 KLHL30Q0D2K2 578 aa14.72□□□□□ -0.05
CASC4-202ENST00000345795 TNIP1Q15025 636 aa14.72□□□□□ -0.05
CASC4-202ENST00000345795 TTC19Q6DKK2 380 aaPredicted RBP14.72□□□□□ -0.05
CASC4-202ENST00000345795 TMED8Q6PL24 325 aaPredicted RBP14.72□□□□□ -0.05
CASC4-202ENST00000345795 KRT222Q8N1A0 295 aa14.72□□□□□ -0.05
CASC4-202ENST00000345795 TAF4BQ92750 862 aa14.72□□□□□ -0.05
CASC4-202ENST00000345795 FAM84AQ96KN4 292 aa14.72□□□□□ -0.05
CASC4-202ENST00000345795 SPATA31A6Q5VVP1 1343 aa14.72□□□□□ -0.05
CASC4-202ENST00000345795 DLATP10515 647 aaKnown RBP14.72□□□□□ -0.05
CASC4-202ENST00000345795 NMT1P30419 496 aaKnown RBP14.72□□□□□ -0.05
CASC4-202ENST00000345795 EIF4A3P38919 411 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 168.4 ms