RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 MRPL12P52815 198 aaKnown RBP16.7■□□□□ 0.26
HMGN3-202ENST00000344726 ARHGAP1Q07960 439 aa16.7■□□□□ 0.26
HMGN3-202ENST00000344726 FAM109BQ6ICB4 259 aaPredicted RBP16.7■□□□□ 0.26
HMGN3-202ENST00000344726 SEPT14Q6ZU15 432 aa16.7■□□□□ 0.26
HMGN3-202ENST00000344726 DHX32Q7L7V1 743 aaKnown RBP16.7■□□□□ 0.26
HMGN3-202ENST00000344726 IL31RAQ8NI17 732 aa16.7■□□□□ 0.26
HMGN3-202ENST00000344726 VWCEQ96DN2 955 aa16.7■□□□□ 0.26
HMGN3-202ENST00000344726 RNPC3Q96LT9 517 aaKnown RBP16.7■□□□□ 0.26
HMGN3-202ENST00000344726 FAM161BQ96MY7 647 aa16.7■□□□□ 0.26
HMGN3-202ENST00000344726 ALDH8A1Q9H2A2 487 aaPredicted RBP16.7■□□□□ 0.26
HMGN3-202ENST00000344726 TRMT13Q9NUP7 481 aaKnown RBP16.7■□□□□ 0.26
HMGN3-202ENST00000344726 PPP4R2Q9NY27 417 aa16.7■□□□□ 0.26
HMGN3-202ENST00000344726 MAP3K20Q9NYL2 800 aaKnown RBP16.7■□□□□ 0.26
HMGN3-202ENST00000344726 SLC12A7Q9Y666 1083 aa16.7■□□□□ 0.26
HMGN3-202ENST00000344726 ACRP10323 421 aa16.69■□□□□ 0.26
HMGN3-202ENST00000344726 CPA1P15085 419 aa16.69■□□□□ 0.26
HMGN3-202ENST00000344726 TTLL4Q14679 1199 aa16.69■□□□□ 0.26
HMGN3-202ENST00000344726 STXBP2Q15833 593 aa16.69■□□□□ 0.26
HMGN3-202ENST00000344726 APOA5Q6Q788 366 aa16.69■□□□□ 0.26
HMGN3-202ENST00000344726 MICU3Q86XE3 530 aa16.69■□□□□ 0.26
HMGN3-202ENST00000344726 FANCBQ8NB91 859 aa16.69■□□□□ 0.26
HMGN3-202ENST00000344726 RRP36Q96EU6 259 aaKnown RBP16.69■□□□□ 0.26
HMGN3-202ENST00000344726 PDCD2LQ9BRP1 358 aa16.69■□□□□ 0.26
HMGN3-202ENST00000344726 NOC4LQ9BVI4 516 aaKnown RBP16.69■□□□□ 0.26
HMGN3-202ENST00000344726 WNT8AQ9H1J5 351 aa16.69■□□□□ 0.26
HMGN3-202ENST00000344726 POLR3EQ9NVU0 708 aa16.69■□□□□ 0.26
HMGN3-202ENST00000344726 BRPF3Q9ULD4 1205 aa16.69■□□□□ 0.26
HMGN3-202ENST00000344726 hCG_1642624A0A1W2PR95 340 aa16.68■□□□□ 0.26
HMGN3-202ENST00000344726 GCOM1H8Y6P7 765 aaPredicted RBP16.68■□□□□ 0.26
HMGN3-202ENST00000344726 POLR2MP0CAP2 368 aa16.68■□□□□ 0.26
HMGN3-202ENST00000344726 CALM1P0DP23 149 aa16.68■□□□□ 0.26
HMGN3-202ENST00000344726 CALM2P0DP24 149 aa16.68■□□□□ 0.26
HMGN3-202ENST00000344726 CALM3P0DP25 149 aa16.68■□□□□ 0.26
HMGN3-202ENST00000344726 HSPA4P34932 840 aa16.68■□□□□ 0.26
HMGN3-202ENST00000344726 GNAQP50148 359 aa16.68■□□□□ 0.26
HMGN3-202ENST00000344726 SMAD3P84022 425 aaKnown RBP16.68■□□□□ 0.26
HMGN3-202ENST00000344726 TRAF1Q13077 416 aa16.68■□□□□ 0.26
HMGN3-202ENST00000344726 PGM5Q15124 567 aa16.68■□□□□ 0.26
HMGN3-202ENST00000344726 NBPF20Q3BBV1 942 aa16.68■□□□□ 0.26
HMGN3-202ENST00000344726 TMEM240Q5SV17 173 aa16.68■□□□□ 0.26
HMGN3-202ENST00000344726 TMTC3Q6ZXV5 915 aa16.68■□□□□ 0.26
HMGN3-202ENST00000344726 FCHSD1Q86WN1 690 aa16.68■□□□□ 0.26
HMGN3-202ENST00000344726 SAMD3Q8N6K7 520 aa16.68■□□□□ 0.26
HMGN3-202ENST00000344726 AFG1LQ8WV93 481 aa16.68■□□□□ 0.26
HMGN3-202ENST00000344726 ZFP91Q96JP5 570 aaPredicted RBP16.68■□□□□ 0.26
HMGN3-202ENST00000344726 LZTS2Q9BRK4 669 aa16.68■□□□□ 0.26
HMGN3-202ENST00000344726 MTG1Q9BT17 334 aaPredicted RBP16.68■□□□□ 0.26
HMGN3-202ENST00000344726 TTYH1Q9H313 450 aaPredicted RBP16.68■□□□□ 0.26
HMGN3-202ENST00000344726 HIPK3Q9H422 1215 aa16.68■□□□□ 0.26
HMGN3-202ENST00000344726 DDX41Q9UJV9 622 aaKnown RBP16.68■□□□□ 0.26
HMGN3-202ENST00000344726 SNX14Q9Y5W7 946 aa16.68■□□□□ 0.26
HMGN3-202ENST00000344726 RBAK-RBAKDNI3L0D1 243 aa16.67■□□□□ 0.26
HMGN3-202ENST00000344726 EIF3JO75822 258 aaKnown RBP16.67■□□□□ 0.26
HMGN3-202ENST00000344726 MMP3P08254 477 aa16.67■□□□□ 0.26
HMGN3-202ENST00000344726 CYP2C9P11712 490 aa16.67■□□□□ 0.26
HMGN3-202ENST00000344726 MYCLP12524 364 aaPredicted RBP16.67■□□□□ 0.26
HMGN3-202ENST00000344726 CCL23P55773 120 aa16.67■□□□□ 0.26
HMGN3-202ENST00000344726 KRT32Q14532 448 aa16.67■□□□□ 0.26
HMGN3-202ENST00000344726 RASIP1Q5U651 963 aa16.67■□□□□ 0.26
HMGN3-202ENST00000344726 CCDC82Q8N4S0 544 aa16.67■□□□□ 0.26
HMGN3-202ENST00000344726 GPKOWQ92917 476 aaPredicted RBP eCLIP16.67■□□□□ 0.26
HMGN3-202ENST00000344726 TRIP12Q14669 1992 aaPredicted RBP16.67■□□□□ 0.26
HMGN3-202ENST00000344726 EYSQ5T1H1 3165 aa16.66■□□□□ 0.26
HMGN3-202ENST00000344726 GH1P01241 217 aa16.66■□□□□ 0.26
HMGN3-202ENST00000344726 PPIGQ13427 754 aaKnown RBP eCLIP16.66■□□□□ 0.261e-8■■□□□ 12.2
HMGN3-202ENST00000344726 USP17L6PQ6QN14 398 aa16.66■□□□□ 0.26
HMGN3-202ENST00000344726 ZNF365Q70YC5 407 aa16.66■□□□□ 0.26
HMGN3-202ENST00000344726 VSIG10LQ86VR7 867 aa16.66■□□□□ 0.26
HMGN3-202ENST00000344726 TMEM199Q8N511 208 aa16.66■□□□□ 0.26
HMGN3-202ENST00000344726 KAT2BQ92831 832 aa16.66■□□□□ 0.26
HMGN3-202ENST00000344726 SCLYQ96I15 445 aa16.66■□□□□ 0.26
HMGN3-202ENST00000344726 JAKMIP1Q96N16 626 aaKnown RBP16.66■□□□□ 0.26
HMGN3-202ENST00000344726 SEZ6LQ9BYH1 1024 aa16.66■□□□□ 0.26
HMGN3-202ENST00000344726 SEC63Q9UGP8 760 aaKnown RBP16.66■□□□□ 0.26
HMGN3-202ENST00000344726 STXBP5LQ9Y2K9 1186 aa16.66■□□□□ 0.26
HMGN3-202ENST00000344726 FRMPD4Q14CM0 1322 aa16.66■□□□□ 0.26
HMGN3-202ENST00000344726 CNTNAP5Q8WYK1 1306 aa16.66■□□□□ 0.26
HMGN3-202ENST00000344726 GRXCR1A8MXD5 290 aa16.65■□□□□ 0.26
HMGN3-202ENST00000344726 MEIS2O14770 477 aa16.65■□□□□ 0.26
HMGN3-202ENST00000344726 FUT2Q10981 343 aa16.65■□□□□ 0.26
HMGN3-202ENST00000344726 ZNF697Q5TEC3 545 aa16.65■□□□□ 0.26
HMGN3-202ENST00000344726 ERICH6BQ5W0A0 696 aa16.65■□□□□ 0.26
HMGN3-202ENST00000344726 CTAGE1Q96RT6 745 aa16.65■□□□□ 0.26
HMGN3-202ENST00000344726 SEMA6BQ9H3T3 888 aa16.65■□□□□ 0.26
HMGN3-202ENST00000344726 IL23AQ9NPF7 189 aa16.65■□□□□ 0.26
HMGN3-202ENST00000344726 FAM217BQ9NTX9 383 aaPredicted RBP16.65■□□□□ 0.26
HMGN3-202ENST00000344726 CXXC1Q9P0U4 656 aaPredicted RBP16.65■□□□□ 0.26
HMGN3-202ENST00000344726 SCN5AQ14524 2016 aa16.65■□□□□ 0.26
HMGN3-202ENST00000344726 TANC1Q9C0D5 1861 aa16.65■□□□□ 0.26
HMGN3-202ENST00000344726 KLF18A0A0U1RQI7 1052 aa16.64■□□□□ 0.25
HMGN3-202ENST00000344726 SPDYE4A6NLX3 237 aa16.64■□□□□ 0.25
HMGN3-202ENST00000344726 ZBTB43O43298 467 aa16.64■□□□□ 0.25
HMGN3-202ENST00000344726 SORBS3O60504 671 aa16.64■□□□□ 0.25
HMGN3-202ENST00000344726 REC8O95072 547 aa16.64■□□□□ 0.25
HMGN3-202ENST00000344726 HMGB1P09429 215 aaKnown RBP16.64■□□□□ 0.25
HMGN3-202ENST00000344726 MRPS9P82933 396 aaKnown RBP16.64■□□□□ 0.25
HMGN3-202ENST00000344726 SP2Q02086 613 aa16.64■□□□□ 0.25
HMGN3-202ENST00000344726 NFRKBQ6P4R8 1299 aa16.64■□□□□ 0.25
HMGN3-202ENST00000344726 EMID1Q96A84 441 aaPredicted RBP16.64■□□□□ 0.25
HMGN3-202ENST00000344726 BCAS3Q9H6U6 928 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms