RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 KRBA2Q6ZNG9 492 aa18.06■□□□□ 0.48
SMARCA4-201ENST00000344626 HNRNPDLO14979 420 aaKnown RBP18.06■□□□□ 0.48
SMARCA4-201ENST00000344626 CTNND1O60716 968 aaKnown RBP18.06■□□□□ 0.48
SMARCA4-201ENST00000344626 PLEKHA8P1O95397 391 aa18.06■□□□□ 0.48
SMARCA4-201ENST00000344626 SRGAP2CP0DJJ0 459 aa18.06■□□□□ 0.48
SMARCA4-201ENST00000344626 TBC1D10CQ8IV04 446 aa18.06■□□□□ 0.48
SMARCA4-201ENST00000344626 TFRCP02786 760 aaKnown RBP18.06■□□□□ 0.48
SMARCA4-201ENST00000344626 CCDC127Q96BQ5 260 aa18.06■□□□□ 0.48
SMARCA4-201ENST00000344626 CSRNP2Q9H175 543 aa18.06■□□□□ 0.48
SMARCA4-201ENST00000344626 STK17AQ9UEE5 414 aa18.06■□□□□ 0.48
SMARCA4-201ENST00000344626 ARMCX3Q9UH62 379 aaPredicted RBP18.06■□□□□ 0.48
SMARCA4-201ENST00000344626 ASB14A6NK59 587 aa18.05■□□□□ 0.48
SMARCA4-201ENST00000344626 SPOPO43791 374 aa18.05■□□□□ 0.48
SMARCA4-201ENST00000344626 ORC4O43929 436 aa18.05■□□□□ 0.48
SMARCA4-201ENST00000344626 AKT1S1Q96B36 256 aa18.05■□□□□ 0.48
SMARCA4-201ENST00000344626 CCDC77Q9BR77 488 aa18.05■□□□□ 0.48
SMARCA4-201ENST00000344626 TAB2Q9NYJ8 693 aa18.05■□□□□ 0.48
SMARCA4-201ENST00000344626 ADM5C9JUS6 153 aa18.05■□□□□ 0.48
SMARCA4-201ENST00000344626 IPO4Q8TEX9 1081 aaKnown RBP18.05■□□□□ 0.48
SMARCA4-201ENST00000344626 LPAR1Q92633 364 aa18.05■□□□□ 0.48
SMARCA4-201ENST00000344626 DNAI1Q9UI46 699 aa18.05■□□□□ 0.48
SMARCA4-201ENST00000344626 AGTPBP1Q9UPW5 1226 aa18.05■□□□□ 0.48
SMARCA4-201ENST00000344626 A0A1W2PQ27 194 aa18.05■□□□□ 0.48
SMARCA4-201ENST00000344626 A0A1W2PQ64 194 aa18.05■□□□□ 0.48
SMARCA4-201ENST00000344626 A0A1W2PQD8 194 aa18.05■□□□□ 0.48
SMARCA4-201ENST00000344626 SPDYE2BA6NHP3 402 aa18.05■□□□□ 0.48
SMARCA4-201ENST00000344626 DYNC1LI2O43237 492 aaPredicted RBP18.05■□□□□ 0.48
SMARCA4-201ENST00000344626 GAS8O95995 478 aa18.05■□□□□ 0.48
SMARCA4-201ENST00000344626 SPDYE6P0CI01 402 aa18.05■□□□□ 0.48
SMARCA4-201ENST00000344626 MTMR1Q13613 665 aa18.05■□□□□ 0.48
SMARCA4-201ENST00000344626 CEP112Q8N8E3 955 aa18.05■□□□□ 0.48
SMARCA4-201ENST00000344626 NAP1L3Q99457 506 aaPredicted RBP18.05■□□□□ 0.48
SMARCA4-201ENST00000344626 POLR3EQ9NVU0 708 aa18.05■□□□□ 0.48
SMARCA4-201ENST00000344626 KIAA1468Q9P260 1216 aa18.05■□□□□ 0.48
SMARCA4-201ENST00000344626 PCDHA7Q9UN72 937 aa18.05■□□□□ 0.48
SMARCA4-201ENST00000344626 RPN1P04843 607 aaKnown RBP18.05■□□□□ 0.48
SMARCA4-201ENST00000344626 HOXA7P31268 230 aaPredicted RBP18.05■□□□□ 0.48
SMARCA4-201ENST00000344626 HDLBPQ00341 1268 aaKnown RBP18.05■□□□□ 0.48
SMARCA4-201ENST00000344626 LDHDQ86WU2 507 aa18.05■□□□□ 0.48
SMARCA4-201ENST00000344626 HAUS2Q9NVX0 235 aa18.05■□□□□ 0.48
SMARCA4-201ENST00000344626 RGL2O15211 777 aa18.04■□□□□ 0.48
SMARCA4-201ENST00000344626 DAPK3O43293 454 aa18.04■□□□□ 0.48
SMARCA4-201ENST00000344626 JAK3P52333 1124 aa18.04■□□□□ 0.48
SMARCA4-201ENST00000344626 TUBB4BP68371 445 aa18.04■□□□□ 0.48
SMARCA4-201ENST00000344626 QRICH1Q2TAL8 776 aa18.04■□□□□ 0.48
SMARCA4-201ENST00000344626 CCDC155Q8N6L0 562 aa18.04■□□□□ 0.48
SMARCA4-201ENST00000344626 FCGRTP55899 365 aa18.04■□□□□ 0.48
SMARCA4-201ENST00000344626 NFIAQ12857 509 aa18.04■□□□□ 0.48
SMARCA4-201ENST00000344626 CCDC122Q5T0U0 273 aa18.04■□□□□ 0.48
SMARCA4-201ENST00000344626 SREK1Q8WXA9 508 aaKnown RBP18.04■□□□□ 0.48
SMARCA4-201ENST00000344626 CLIC4Q9Y696 253 aa18.04■□□□□ 0.48
SMARCA4-201ENST00000344626 MEIS1O00470 390 aa18.04■□□□□ 0.48
SMARCA4-201ENST00000344626 DLATP10515 647 aaKnown RBP18.04■□□□□ 0.48
SMARCA4-201ENST00000344626 DCUN1D2Q6PH85 259 aa18.04■□□□□ 0.48
SMARCA4-201ENST00000344626 CATSPER4Q7RTX7 472 aa18.04■□□□□ 0.48
SMARCA4-201ENST00000344626 OTUD6BQ8N6M0 293 aa18.04■□□□□ 0.48
SMARCA4-201ENST00000344626 C1orf112Q9NSG2 853 aa18.04■□□□□ 0.48
SMARCA4-201ENST00000344626 KIF23Q02241 960 aaPredicted RBP18.04■□□□□ 0.48
SMARCA4-201ENST00000344626 POMGNT1Q8WZA1 660 aa18.04■□□□□ 0.48
SMARCA4-201ENST00000344626 WDR46O15213 610 aaKnown RBP18.04■□□□□ 0.48
SMARCA4-201ENST00000344626 NDUFB10O96000 172 aa18.04■□□□□ 0.48
SMARCA4-201ENST00000344626 ARPP19P56211 112 aa18.04■□□□□ 0.48
SMARCA4-201ENST00000344626 MIS12Q9H081 205 aa18.04■□□□□ 0.48
SMARCA4-201ENST00000344626 KMT5AQ9NQR1 393 aa18.04■□□□□ 0.48
SMARCA4-201ENST00000344626 BCCIPQ9P287 314 aaKnown RBP eCLIP18.04■□□□□ 0.48
SMARCA4-201ENST00000344626 NEDD4P46934 1319 aa18.03■□□□□ 0.48
SMARCA4-201ENST00000344626 TLR3O15455 904 aaKnown RBP18.03■□□□□ 0.48
SMARCA4-201ENST00000344626 INPP5BP32019 993 aa18.03■□□□□ 0.48
SMARCA4-201ENST00000344626 SFMBT2Q5VUG0 894 aa18.03■□□□□ 0.48
SMARCA4-201ENST00000344626 FAM167AQ96KS9 214 aa18.03■□□□□ 0.48
SMARCA4-201ENST00000344626 MYL1P05976 194 aa18.03■□□□□ 0.48
SMARCA4-201ENST00000344626 GRM4Q14833 912 aa18.03■□□□□ 0.48
SMARCA4-201ENST00000344626 SCYL3Q8IZE3 742 aa18.03■□□□□ 0.48
SMARCA4-201ENST00000344626 NLGN2Q8NFZ4 835 aa18.03■□□□□ 0.48
SMARCA4-201ENST00000344626 MTIF3Q9H2K0 278 aaKnown RBP18.03■□□□□ 0.48
SMARCA4-201ENST00000344626 TXNP10599 105 aaKnown RBP18.03■□□□□ 0.48
SMARCA4-201ENST00000344626 NEDD9Q14511 834 aa18.03■□□□□ 0.48
SMARCA4-201ENST00000344626 CCDC14Q49A88 953 aa18.03■□□□□ 0.48
SMARCA4-201ENST00000344626 ENAHQ8N8S7 591 aaPredicted RBP18.03■□□□□ 0.48
SMARCA4-201ENST00000344626 GTF3C2Q8WUA4 911 aaPredicted RBP18.03■□□□□ 0.48
SMARCA4-201ENST00000344626 MED10Q9BTT4 135 aa18.03■□□□□ 0.48
SMARCA4-201ENST00000344626 ST7Q9NRC1 585 aa18.03■□□□□ 0.48
SMARCA4-201ENST00000344626 NR5A1Q13285 461 aa18.03■□□□□ 0.48
SMARCA4-201ENST00000344626 DEFB115Q30KQ5 88 aa18.03■□□□□ 0.48
SMARCA4-201ENST00000344626 ACCSQ96QU6 501 aa18.03■□□□□ 0.48
SMARCA4-201ENST00000344626 KIF1AQ12756 1690 aa18.02■□□□□ 0.48
SMARCA4-201ENST00000344626 GADD45BO75293 160 aaPredicted RBP18.02■□□□□ 0.48
SMARCA4-201ENST00000344626 KLHL30Q0D2K2 578 aa18.02■□□□□ 0.48
SMARCA4-201ENST00000344626 CPA4Q9UI42 421 aa18.02■□□□□ 0.48
SMARCA4-201ENST00000344626 ARHGEF37A1IGU5 675 aa18.02■□□□□ 0.48
SMARCA4-201ENST00000344626 RIOK1Q9BRS2 568 aaKnown RBP18.02■□□□□ 0.48
SMARCA4-201ENST00000344626 PCDHA6Q9UN73 950 aa18.02■□□□□ 0.48
SMARCA4-201ENST00000344626 PCDHA8Q9Y5H6 950 aa18.02■□□□□ 0.48
SMARCA4-201ENST00000344626 KARSQ15046 597 aaKnown RBP18.02■□□□□ 0.48
SMARCA4-201ENST00000344626 UBL4BQ8N7F7 174 aa18.02■□□□□ 0.48
SMARCA4-201ENST00000344626 CLIC6Q96NY7 704 aa18.02■□□□□ 0.48
SMARCA4-201ENST00000344626 TMEM206Q9H813 350 aa18.02■□□□□ 0.48
SMARCA4-201ENST00000344626 INPP5FQ9Y2H2 1132 aa18.02■□□□□ 0.48
SMARCA4-201ENST00000344626 GBP6Q6ZN66 633 aa18.02■□□□□ 0.47
SMARCA4-201ENST00000344626 VCPKMTQ9H867 229 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms