RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 PTPN22Q9Y2R2 807 aa16.56■□□□□ 0.24
COL11A2-201ENST00000341947 GCFC2P16383 781 aaKnown RBP16.55■□□□□ 0.24
COL11A2-201ENST00000341947 NDUFA8P51970 172 aa16.55■□□□□ 0.24
COL11A2-201ENST00000341947 KANSL2Q9H9L4 492 aa16.55■□□□□ 0.24
COL11A2-201ENST00000341947 GDF11O95390 407 aa16.55■□□□□ 0.24
COL11A2-201ENST00000341947 ACTN1P12814 892 aa16.55■□□□□ 0.24
COL11A2-201ENST00000341947 ARPP19P56211 112 aa16.55■□□□□ 0.24
COL11A2-201ENST00000341947 FOXP1Q9H334 677 aaPredicted RBP16.55■□□□□ 0.24
COL11A2-201ENST00000341947 TMEM206Q9H813 350 aa16.55■□□□□ 0.24
COL11A2-201ENST00000341947 ADAMTS12P58397 1594 aa16.55■□□□□ 0.24
COL11A2-201ENST00000341947 SPDYE2BA6NHP3 402 aa16.55■□□□□ 0.24
COL11A2-201ENST00000341947 SPDYE6P0CI01 402 aa16.55■□□□□ 0.24
COL11A2-201ENST00000341947 ADORA1P30542 326 aa16.55■□□□□ 0.24
COL11A2-201ENST00000341947 MAPK4P31152 587 aa16.55■□□□□ 0.24
COL11A2-201ENST00000341947 IL6STP40189 918 aaPredicted RBP16.55■□□□□ 0.24
COL11A2-201ENST00000341947 RASSF7Q02833 373 aa16.55■□□□□ 0.24
COL11A2-201ENST00000341947 FAM196AQ6ZSG2 479 aa16.55■□□□□ 0.24
COL11A2-201ENST00000341947 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.55■□□□□ 0.24
COL11A2-201ENST00000341947 CEP170P1Q96L14 293 aa16.55■□□□□ 0.24
COL11A2-201ENST00000341947 MYOM2P54296 1465 aa16.55■□□□□ 0.24
COL11A2-201ENST00000341947 STX1BP61266 288 aa16.55■□□□□ 0.24
COL11A2-201ENST00000341947 FAM186BQ8IYM0 893 aa16.55■□□□□ 0.24
COL11A2-201ENST00000341947 GBP5Q96PP8 586 aa16.55■□□□□ 0.24
COL11A2-201ENST00000341947 UBN1Q9NPG3 1134 aa16.55■□□□□ 0.24
COL11A2-201ENST00000341947 RIPOR2Q9Y4F9 1068 aa16.55■□□□□ 0.24
COL11A2-201ENST00000341947 ABCC12Q96J65 1359 aa16.55■□□□□ 0.24
COL11A2-201ENST00000341947 ANXA13P27216 316 aa16.55■□□□□ 0.24
COL11A2-201ENST00000341947 ZNF653Q96CK0 615 aa16.55■□□□□ 0.24
COL11A2-201ENST00000341947 DBNDD1Q9H9R9 158 aa16.55■□□□□ 0.24
COL11A2-201ENST00000341947 GPR108Q9NPR9 543 aa16.55■□□□□ 0.24
COL11A2-201ENST00000341947 STAT2P52630 851 aa16.54■□□□□ 0.24
COL11A2-201ENST00000341947 SART1O43290 800 aaKnown RBP16.54■□□□□ 0.24
COL11A2-201ENST00000341947 BMP3P12645 472 aa16.54■□□□□ 0.24
COL11A2-201ENST00000341947 ARL4AP40617 200 aa16.54■□□□□ 0.24
COL11A2-201ENST00000341947 CCNYQ8ND76 341 aa16.54■□□□□ 0.24
COL11A2-201ENST00000341947 TUBGCP2Q9BSJ2 902 aa16.54■□□□□ 0.24
COL11A2-201ENST00000341947 RNF26Q9BY78 433 aaPredicted RBP16.54■□□□□ 0.24
COL11A2-201ENST00000341947 MTMR6Q9Y217 621 aa16.54■□□□□ 0.24
COL11A2-201ENST00000341947 CPP00450 1065 aa16.54■□□□□ 0.24
COL11A2-201ENST00000341947 NAA35Q5VZE5 725 aa16.54■□□□□ 0.24
COL11A2-201ENST00000341947 ZNF772Q68DY9 489 aaPredicted RBP16.54■□□□□ 0.24
COL11A2-201ENST00000341947 MYLK4Q86YV6 388 aaPredicted RBP16.54■□□□□ 0.24
COL11A2-201ENST00000341947 SMAP1Q8IYB5 467 aaPredicted RBP16.54■□□□□ 0.24
COL11A2-201ENST00000341947 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.54■□□□□ 0.24
COL11A2-201ENST00000341947 PDZD8Q8NEN9 1154 aa16.54■□□□□ 0.24
COL11A2-201ENST00000341947 CFAP61Q8NHU2 1237 aa16.54■□□□□ 0.24
COL11A2-201ENST00000341947 EPN1Q9Y6I3 576 aaPredicted RBP16.54■□□□□ 0.24
COL11A2-201ENST00000341947 SCRN1Q12765 414 aa16.54■□□□□ 0.24
COL11A2-201ENST00000341947 SYDE2Q5VT97 1194 aa16.54■□□□□ 0.24
COL11A2-201ENST00000341947 POC1B-GALNT4F8VUJ3 575 aa16.54■□□□□ 0.24
COL11A2-201ENST00000341947 BBOX1O75936 387 aa16.54■□□□□ 0.24
COL11A2-201ENST00000341947 GSPT1P15170 499 aaKnown RBP16.54■□□□□ 0.24
COL11A2-201ENST00000341947 EHHADHQ08426 723 aa16.54■□□□□ 0.24
COL11A2-201ENST00000341947 MYO1EQ12965 1108 aa16.54■□□□□ 0.24
COL11A2-201ENST00000341947 DHTKD1Q96HY7 919 aaPredicted RBP16.54■□□□□ 0.24
COL11A2-201ENST00000341947 TMEM63CQ9P1W3 806 aa16.54■□□□□ 0.24
COL11A2-201ENST00000341947 PSPC1Q8WXF1 523 aaKnown RBP16.53■□□□□ 0.24
COL11A2-201ENST00000341947 GCNAQ96QF7 691 aa16.53■□□□□ 0.24
COL11A2-201ENST00000341947 INSRP06213 1382 aa16.53■□□□□ 0.24
COL11A2-201ENST00000341947 PPP6R2O75170 966 aa16.53■□□□□ 0.24
COL11A2-201ENST00000341947 PDE1CQ14123 709 aaPredicted RBP16.53■□□□□ 0.24
COL11A2-201ENST00000341947 MCF2LO15068 1137 aa16.53■□□□□ 0.24
COL11A2-201ENST00000341947 ELMSAN1Q6PJG2 1045 aa16.53■□□□□ 0.24
COL11A2-201ENST00000341947 TACO1Q9BSH4 297 aaKnown RBP16.53■□□□□ 0.24
COL11A2-201ENST00000341947 IRAK4Q9NWZ3 460 aa16.53■□□□□ 0.24
COL11A2-201ENST00000341947 YEATS2Q9ULM3 1422 aa16.53■□□□□ 0.24
COL11A2-201ENST00000341947 SLC4A1P02730 911 aa16.53■□□□□ 0.24
COL11A2-201ENST00000341947 KRT1P04264 644 aa16.53■□□□□ 0.24
COL11A2-201ENST00000341947 IREB2P48200 963 aaKnown RBP16.53■□□□□ 0.24
COL11A2-201ENST00000341947 ATP1A2P50993 1020 aa16.53■□□□□ 0.24
COL11A2-201ENST00000341947 TFAMQ00059 246 aaKnown RBP16.53■□□□□ 0.24
COL11A2-201ENST00000341947 APBA1Q02410 837 aa16.53■□□□□ 0.24
COL11A2-201ENST00000341947 SPZ1Q9BXG8 430 aa16.53■□□□□ 0.24
COL11A2-201ENST00000341947 DHX36Q9H2U1 1008 aaKnown RBP16.53■□□□□ 0.24
COL11A2-201ENST00000341947 THOC5Q13769 683 aaKnown RBP16.53■□□□□ 0.24
COL11A2-201ENST00000341947 ERFEQ4G0M1 354 aa16.53■□□□□ 0.24
COL11A2-201ENST00000341947 ZMYM1Q5SVZ6 1142 aa16.53■□□□□ 0.24
COL11A2-201ENST00000341947 EFCAB13Q8IY85 973 aa16.53■□□□□ 0.24
COL11A2-201ENST00000341947 GSDMAQ96QA5 445 aa16.53■□□□□ 0.24
COL11A2-201ENST00000341947 PUS3Q9BZE2 481 aaKnown RBP16.53■□□□□ 0.24
COL11A2-201ENST00000341947 COPRSQ9NQ92 184 aa16.53■□□□□ 0.24
COL11A2-201ENST00000341947 LMCD1Q9NZU5 365 aa16.53■□□□□ 0.24
COL11A2-201ENST00000341947 SLC8A2Q9UPR5 921 aa16.53■□□□□ 0.24
COL11A2-201ENST00000341947 PSAPP07602 524 aa16.52■□□□□ 0.24
COL11A2-201ENST00000341947 IL1RL1Q01638 556 aa16.52■□□□□ 0.24
COL11A2-201ENST00000341947 SPATS2Q86XZ4 545 aaKnown RBP16.52■□□□□ 0.24
COL11A2-201ENST00000341947 CAPS2Q9BXY5 557 aa16.52■□□□□ 0.24
COL11A2-201ENST00000341947 GOLGA8SH3BPF8 625 aa16.52■□□□□ 0.24
COL11A2-201ENST00000341947 M0R2C6 588 aa16.52■□□□□ 0.24
COL11A2-201ENST00000341947 RXRBP28702 533 aa16.52■□□□□ 0.24
COL11A2-201ENST00000341947 SERPINB6P35237 376 aa16.52■□□□□ 0.24
COL11A2-201ENST00000341947 SLC16A2P36021 539 aa16.52■□□□□ 0.24
COL11A2-201ENST00000341947 LRRC4Q9HBW1 653 aa16.52■□□□□ 0.24
COL11A2-201ENST00000341947 PTPRTO14522 1441 aa16.52■□□□□ 0.24
COL11A2-201ENST00000341947 EFCAB8A8MWE9 144 aa16.52■□□□□ 0.24
COL11A2-201ENST00000341947 OPHN1O60890 802 aa16.52■□□□□ 0.24
COL11A2-201ENST00000341947 HIP1RO75146 1068 aa16.52■□□□□ 0.24
COL11A2-201ENST00000341947 DYNLL1P63167 89 aaKnown RBP16.52■□□□□ 0.24
COL11A2-201ENST00000341947 IL9RQ01113 521 aa16.52■□□□□ 0.24
COL11A2-201ENST00000341947 ARHGEF18Q6ZSZ5 1173 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms