RNA–Protein interactions for RNA: ENST00000340513.4

TPX2-202, Transcript of TPX2, microtubule nucleation factor, humanhuman

TSL 1 (best) BASIC

Gene TPX2, Length 3,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPX2-202ENST00000340513 EPHB4P54760 987 aa13.03□□□□□ -0.32
TPX2-202ENST00000340513 ST3GAL1Q11201 340 aa13.03□□□□□ -0.32
TPX2-202ENST00000340513 KSR1Q8IVT5 923 aa13.03□□□□□ -0.32
TPX2-202ENST00000340513 PAF1Q8N7H5 531 aa13.03□□□□□ -0.32
TPX2-202ENST00000340513 NUDCD1Q96RS6 583 aa13.03□□□□□ -0.32
TPX2-202ENST00000340513 SELENOSQ9BQE4 189 aa13.03□□□□□ -0.32
TPX2-202ENST00000340513 C6orf203Q9P0P8 240 aaPredicted RBP13.03□□□□□ -0.32
TPX2-202ENST00000340513 ADCY3O60266 1144 aa13.02□□□□□ -0.32
TPX2-202ENST00000340513 OPHN1O60890 802 aa13.02□□□□□ -0.32
TPX2-202ENST00000340513 OXSR1O95747 527 aaPredicted RBP13.02□□□□□ -0.32
TPX2-202ENST00000340513 PEX5P50542 639 aa13.02□□□□□ -0.32
TPX2-202ENST00000340513 SGSM1Q2NKQ1 1148 aa13.02□□□□□ -0.32
TPX2-202ENST00000340513 CCDC122Q5T0U0 273 aa13.02□□□□□ -0.32
TPX2-202ENST00000340513 FOXB2Q5VYV0 432 aa13.02□□□□□ -0.32
TPX2-202ENST00000340513 MLKLQ8NB16 471 aa13.02□□□□□ -0.32
TPX2-202ENST00000340513 RAPGEF5Q92565 580 aa13.02□□□□□ -0.32
TPX2-202ENST00000340513 TTF2Q9UNY4 1162 aaKnown RBP13.02□□□□□ -0.32
TPX2-202ENST00000340513 A6NJR5 290 aa13.02□□□□□ -0.33
TPX2-202ENST00000340513 SPDYE16A6NNV3 312 aaPredicted RBP13.02□□□□□ -0.33
TPX2-202ENST00000340513 UBOX5O94941 541 aa13.02□□□□□ -0.33
TPX2-202ENST00000340513 ATP1A1P05023 1023 aaKnown RBP13.02□□□□□ -0.33
TPX2-202ENST00000340513 GHRP10912 638 aa13.02□□□□□ -0.33
TPX2-202ENST00000340513 RNASELQ05823 741 aaKnown RBP13.02□□□□□ -0.33
TPX2-202ENST00000340513 SAFBQ15424 915 aaKnown RBP eCLIP13.02□□□□□ -0.33
TPX2-202ENST00000340513 KLC3Q6P597 504 aa13.02□□□□□ -0.33
TPX2-202ENST00000340513 C11orf74Q86VG3 221 aa13.02□□□□□ -0.33
TPX2-202ENST00000340513 ARHGEF25Q86VW2 580 aa13.02□□□□□ -0.33
TPX2-202ENST00000340513 RAVER1Q8IY67 606 aaKnown RBP13.02□□□□□ -0.33
TPX2-202ENST00000340513 NELFBQ8WX92 580 aa13.02□□□□□ -0.33
TPX2-202ENST00000340513 MGEA5O60502 916 aa13.02□□□□□ -0.33
TPX2-202ENST00000340513 ATP9AO75110 1047 aa13.02□□□□□ -0.33
TPX2-202ENST00000340513 HSPA1AP0DMV8 641 aaKnown RBP13.02□□□□□ -0.33
TPX2-202ENST00000340513 HSPA1BP0DMV9 641 aaKnown RBP13.02□□□□□ -0.33
TPX2-202ENST00000340513 PPARAQ07869 468 aa13.02□□□□□ -0.33
TPX2-202ENST00000340513 MAK16Q9BXY0 300 aaKnown RBP13.02□□□□□ -0.33
TPX2-202ENST00000340513 TUT1Q9H6E5 874 aaKnown RBP13.02□□□□□ -0.33
TPX2-202ENST00000340513 CTTNBP2NLQ9P2B4 639 aa13.02□□□□□ -0.33
TPX2-202ENST00000340513 NFU1Q9UMS0 254 aa13.02□□□□□ -0.33
TPX2-202ENST00000340513 ZNF148Q9UQR1 794 aa13.02□□□□□ -0.33
TPX2-202ENST00000340513 CLTCQ00610 1675 aaKnown RBP13.02□□□□□ -0.33
TPX2-202ENST00000340513 POLR3AO14802 1390 aaPredicted RBP13.02□□□□□ -0.33
TPX2-202ENST00000340513 POLR2FP61218 127 aaKnown RBP13.01□□□□□ -0.33
TPX2-202ENST00000340513 PPP4R3AQ6IN85 833 aa13.01□□□□□ -0.33
TPX2-202ENST00000340513 TRPM8Q7Z2W7 1104 aa13.01□□□□□ -0.33
TPX2-202ENST00000340513 CACNA2D4Q7Z3S7 1137 aa13.01□□□□□ -0.33
TPX2-202ENST00000340513 CENPKQ9BS16 269 aa13.01□□□□□ -0.33
TPX2-202ENST00000340513 CCDC113Q9H0I3 377 aa13.01□□□□□ -0.33
TPX2-202ENST00000340513 TAF1DQ9H5J8 278 aaPredicted RBP13.01□□□□□ -0.33
TPX2-202ENST00000340513 ABLIM1O14639 778 aa13.01□□□□□ -0.33
TPX2-202ENST00000340513 PRKG1Q13976 671 aa13.01□□□□□ -0.33
TPX2-202ENST00000340513 GLE1Q53GS7 698 aaKnown RBP13.01□□□□□ -0.33
TPX2-202ENST00000340513 SH3D19Q5HYK7 790 aa13.01□□□□□ -0.33
TPX2-202ENST00000340513 LLGL2Q6P1M3 1020 aa13.01□□□□□ -0.33
TPX2-202ENST00000340513 TAOK1Q7L7X3 1001 aa13.01□□□□□ -0.33
TPX2-202ENST00000340513 OR2W6PQ8NHA6 318 aa13.01□□□□□ -0.33
TPX2-202ENST00000340513 DQX1Q8TE96 717 aaKnown RBP13.01□□□□□ -0.33
TPX2-202ENST00000340513 GFM2Q969S9 779 aaKnown RBP13.01□□□□□ -0.33
TPX2-202ENST00000340513 EPSTI1Q96J88 318 aa13.01□□□□□ -0.33
TPX2-202ENST00000340513 PANX2Q96RD6 677 aa13.01□□□□□ -0.33
TPX2-202ENST00000340513 CTNNAL1Q9UBT7 734 aa13.01□□□□□ -0.33
TPX2-202ENST00000340513 NKX1-2Q9UD57 310 aaPredicted RBP13.01□□□□□ -0.33
TPX2-202ENST00000340513 AGAP1Q9UPQ3 857 aa13.01□□□□□ -0.33
TPX2-202ENST00000340513 POTEJP0CG39 1038 aa13.01□□□□□ -0.33
TPX2-202ENST00000340513 VDRP11473 427 aa13.01□□□□□ -0.33
TPX2-202ENST00000340513 IFNAR2P48551 515 aa13.01□□□□□ -0.33
TPX2-202ENST00000340513 COL9A3Q14050 684 aaPredicted RBP13.01□□□□□ -0.33
TPX2-202ENST00000340513 NCAPHQ15003 741 aa13.01□□□□□ -0.33
TPX2-202ENST00000340513 NUTM2DQ5VT03 806 aaPredicted RBP13.01□□□□□ -0.33
TPX2-202ENST00000340513 CABP7Q86V35 215 aa13.01□□□□□ -0.33
TPX2-202ENST00000340513 SPATA24Q86W54 205 aa13.01□□□□□ -0.33
TPX2-202ENST00000340513 TRMT44Q8IYL2 757 aaKnown RBP13.01□□□□□ -0.33
TPX2-202ENST00000340513 NSUN7Q8NE18 718 aaKnown RBP13.01□□□□□ -0.33
TPX2-202ENST00000340513 NOVA2Q9UNW9 492 aaKnown RBP13.01□□□□□ -0.33
TPX2-202ENST00000340513 LZTS1Q9Y250 596 aa13.01□□□□□ -0.33
TPX2-202ENST00000340513 SHANK2Q9UPX8 1470 aa13□□□□□ -0.33
TPX2-202ENST00000340513 IDEP14735 1019 aa13□□□□□ -0.33
TPX2-202ENST00000340513 ITGB3BPQ13352 177 aaPredicted RBP13□□□□□ -0.33
TPX2-202ENST00000340513 OR52E8Q6IFG1 317 aa13□□□□□ -0.33
TPX2-202ENST00000340513 RIBC1Q8N443 379 aaPredicted RBP13□□□□□ -0.33
TPX2-202ENST00000340513 MDM1Q8TC05 714 aa13□□□□□ -0.33
TPX2-202ENST00000340513 AENQ8WTP8 325 aaKnown RBP13□□□□□ -0.33
TPX2-202ENST00000340513 DNAI2Q9GZS0 605 aa13□□□□□ -0.33
TPX2-202ENST00000340513 ZNF233A6NK53 670 aa13□□□□□ -0.33
TPX2-202ENST00000340513 HMGB1P1B2RPK0 211 aaPredicted RBP13□□□□□ -0.33
TPX2-202ENST00000340513 IKBKBO14920 756 aa13□□□□□ -0.33
TPX2-202ENST00000340513 TRAPPC3O43617 180 aa13□□□□□ -0.33
TPX2-202ENST00000340513 SLC16A2P36021 539 aa13□□□□□ -0.33
TPX2-202ENST00000340513 TCF7P36402 384 aaPredicted RBP13□□□□□ -0.33
TPX2-202ENST00000340513 VMP1Q96GC9 406 aa13□□□□□ -0.33
TPX2-202ENST00000340513 GLT8D2Q9H1C3 349 aa13□□□□□ -0.33
TPX2-202ENST00000340513 CLIC5Q9NZA1 410 aa13□□□□□ -0.33
TPX2-202ENST00000340513 CIDEBQ9UHD4 219 aa13□□□□□ -0.33
TPX2-202ENST00000340513 TFR2Q9UP52 801 aa13□□□□□ -0.33
TPX2-202ENST00000340513 NVLO15381 856 aaKnown RBP13□□□□□ -0.33
TPX2-202ENST00000340513 POLR3DP05423 398 aaPredicted RBP13□□□□□ -0.33
TPX2-202ENST00000340513 CYLC2Q14093 348 aaPredicted RBP13□□□□□ -0.33
TPX2-202ENST00000340513 KIF22Q14807 665 aa13□□□□□ -0.33
TPX2-202ENST00000340513 WAPLQ7Z5K2 1190 aa13□□□□□ -0.33
TPX2-202ENST00000340513 PTPRN2Q92932 1015 aa13□□□□□ -0.33
TPX2-202ENST00000340513 PHF12Q96QT6 1004 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms