RNA–Protein interactions for RNA: ENST00000339647.5

UBC-201, Transcript of ubiquitin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBC, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-201ENST00000339647 TRIM9Q9C026 710 aa22.27■■□□□ 1.16
UBC-201ENST00000339647 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.27■■□□□ 1.16
UBC-201ENST00000339647 MAGEB6P1A0A0J9YX57 407 aa22.26■■□□□ 1.15
UBC-201ENST00000339647 MYL1P05976 194 aa22.26■■□□□ 1.15
UBC-201ENST00000339647 DYNLL1P63167 89 aaKnown RBP22.26■■□□□ 1.15
UBC-201ENST00000339647 DRP2Q13474 957 aa22.26■■□□□ 1.15
UBC-201ENST00000339647 KLHL7Q8IXQ5 586 aa22.26■■□□□ 1.15
UBC-201ENST00000339647 BAP1Q92560 729 aa22.26■■□□□ 1.15
UBC-201ENST00000339647 SCLT1Q96NL6 688 aa22.26■■□□□ 1.15
UBC-201ENST00000339647 CCDC155Q8N6L0 562 aa22.26■■□□□ 1.15
UBC-201ENST00000339647 CCSER1Q9C0I3 900 aa22.26■■□□□ 1.15
UBC-201ENST00000339647 SLC39A2Q9NP94 309 aa22.26■■□□□ 1.15
UBC-201ENST00000339647 TPX2Q9ULW0 747 aaKnown RBP22.26■■□□□ 1.15
UBC-201ENST00000339647 HSPA9P38646 679 aaKnown RBP22.25■■□□□ 1.15
UBC-201ENST00000339647 E2F5Q15329 346 aa22.25■■□□□ 1.15
UBC-201ENST00000339647 CDC37Q16543 378 aaPredicted RBP22.25■■□□□ 1.15
UBC-201ENST00000339647 FAM47AQ5JRC9 791 aa22.25■■□□□ 1.15
UBC-201ENST00000339647 PROCA1Q8NCQ7 364 aaPredicted RBP22.25■■□□□ 1.15
UBC-201ENST00000339647 KIAA0895Q8NCT3 520 aa22.25■■□□□ 1.15
UBC-201ENST00000339647 C1orf131Q8NDD1 294 aaKnown RBP22.25■■□□□ 1.15
UBC-201ENST00000339647 HLTFQ14527 1009 aaKnown RBP eCLIP22.25■■□□□ 1.15
UBC-201ENST00000339647 INF2Q27J81 1249 aa22.25■■□□□ 1.15
UBC-201ENST00000339647 ANKRD20A8PQ5CZ79 823 aa22.25■■□□□ 1.15
UBC-201ENST00000339647 ACTR5Q9H9F9 607 aaPredicted RBP22.25■■□□□ 1.15
UBC-201ENST00000339647 BCCIPQ9P287 314 aaKnown RBP eCLIP22.25■■□□□ 1.15
UBC-201ENST00000339647 GOLGA6L10A6NI86 522 aa22.24■■□□□ 1.15
UBC-201ENST00000339647 HSD17B3P37058 310 aa22.24■■□□□ 1.15
UBC-201ENST00000339647 TDRD12Q587J7 1177 aaKnown RBP22.24■■□□□ 1.15
UBC-201ENST00000339647 RNF14Q9UBS8 474 aa22.24■■□□□ 1.15
UBC-201ENST00000339647 LEMD3Q9Y2U8 911 aa22.24■■□□□ 1.15
UBC-201ENST00000339647 OPLAHO14841 1288 aa22.24■■□□□ 1.15
UBC-201ENST00000339647 EHHADHQ08426 723 aa22.24■■□□□ 1.15
UBC-201ENST00000339647 RNF10Q8N5U6 811 aaKnown RBP22.24■■□□□ 1.15
UBC-201ENST00000339647 SLC12A6Q9UHW9 1150 aa22.24■■□□□ 1.15
UBC-201ENST00000339647 TSKSQ9UJT2 592 aa22.24■■□□□ 1.15
UBC-201ENST00000339647 GCOM1H8Y6P7 765 aaPredicted RBP22.24■■□□□ 1.15
UBC-201ENST00000339647 TRAPPC3O43617 180 aa22.24■■□□□ 1.15
UBC-201ENST00000339647 MYZAPP0CAP1 466 aa22.24■■□□□ 1.15
UBC-201ENST00000339647 UAP1Q16222 522 aaPredicted RBP22.24■■□□□ 1.15
UBC-201ENST00000339647 HGSNATQ68CP4 663 aa22.24■■□□□ 1.15
UBC-201ENST00000339647 PLCB1Q9NQ66 1216 aa22.24■■□□□ 1.15
UBC-201ENST00000339647 BAZ2AQ9UIF9 1905 aaKnown RBP22.23■■□□□ 1.15
UBC-201ENST00000339647 CCDC194A0A1B0GVG4 234 aa22.23■■□□□ 1.15
UBC-201ENST00000339647 SRRM3A6NNA2 597 aaPredicted RBP22.23■■□□□ 1.15
UBC-201ENST00000339647 ERVK-9P63128 1117 aa22.23■■□□□ 1.15
UBC-201ENST00000339647 BYSLQ13895 437 aaKnown RBP22.23■■□□□ 1.15
UBC-201ENST00000339647 PDXDC1Q6P996 788 aa22.23■■□□□ 1.15
UBC-201ENST00000339647 CABP7Q86V35 215 aa22.23■■□□□ 1.15
UBC-201ENST00000339647 DDX42Q86XP3 938 aaKnown RBP eCLIP22.23■■□□□ 1.15
UBC-201ENST00000339647 ARFGAP2Q8N6H7 521 aa22.23■■□□□ 1.15
UBC-201ENST00000339647 CCDC47Q96A33 483 aaKnown RBP22.23■■□□□ 1.15
UBC-201ENST00000339647 IQCDQ96DY2 449 aa22.23■■□□□ 1.15
UBC-201ENST00000339647 SGSM3Q96HU1 749 aa22.23■■□□□ 1.15
UBC-201ENST00000339647 SEC16BQ96JE7 1060 aa22.23■■□□□ 1.15
UBC-201ENST00000339647 INPP4AQ96PE3 977 aaPredicted RBP22.23■■□□□ 1.15
UBC-201ENST00000339647 NLRC4Q9NPP4 1024 aa22.23■■□□□ 1.15
UBC-201ENST00000339647 CNOT8Q9UFF9 292 aaKnown RBP22.23■■□□□ 1.15
UBC-201ENST00000339647 PCDHA4Q9UN74 947 aa22.23■■□□□ 1.15
UBC-201ENST00000339647 DUOX1Q9NRD9 1551 aa22.23■■□□□ 1.15
UBC-201ENST00000339647 FLT1P17948 1338 aa22.23■■□□□ 1.15
UBC-201ENST00000339647 CCDC189A1A4V9 331 aa22.23■■□□□ 1.15
UBC-201ENST00000339647 H0YGN5 161 aa22.23■■□□□ 1.15
UBC-201ENST00000339647 CLSTN1O94985 981 aa22.23■■□□□ 1.15
UBC-201ENST00000339647 CALML3P27482 149 aa22.23■■□□□ 1.15
UBC-201ENST00000339647 CACNA2D4Q7Z3S7 1137 aa22.23■■□□□ 1.15
UBC-201ENST00000339647 NFS1Q9Y697 457 aa22.23■■□□□ 1.15
UBC-201ENST00000339647 MYH3P11055 1940 aa22.22■■□□□ 1.15
UBC-201ENST00000339647 KLRC1P26715 233 aa22.22■■□□□ 1.15
UBC-201ENST00000339647 TXNRD1Q16881 649 aa22.22■■□□□ 1.15
UBC-201ENST00000339647 RIOK1Q9BRS2 568 aaKnown RBP22.22■■□□□ 1.15
UBC-201ENST00000339647 TAF1DQ9H5J8 278 aaPredicted RBP22.22■■□□□ 1.15
UBC-201ENST00000339647 ASAP1Q9ULH1 1129 aa22.22■■□□□ 1.15
UBC-201ENST00000339647 FRMD3A2A2Y4 597 aa22.22■■□□□ 1.15
UBC-201ENST00000339647 ECHS1P30084 290 aa22.22■■□□□ 1.15
UBC-201ENST00000339647 SCTRP47872 440 aa22.22■■□□□ 1.15
UBC-201ENST00000339647 KIRREL3Q8IZU9 778 aa22.22■■□□□ 1.15
UBC-201ENST00000339647 SLAIN2Q9P270 581 aa22.22■■□□□ 1.15
UBC-201ENST00000339647 TNS2Q63HR2 1409 aa22.21■■□□□ 1.15
UBC-201ENST00000339647 GCFC2P16383 781 aaKnown RBP22.21■■□□□ 1.15
UBC-201ENST00000339647 ZNF844Q08AG5 666 aa22.21■■□□□ 1.15
UBC-201ENST00000339647 USP17L12C9JPN9 530 aa22.21■■□□□ 1.15
UBC-201ENST00000339647 USP17L21D6R901 530 aa22.21■■□□□ 1.15
UBC-201ENST00000339647 MAN2A1Q16706 1144 aa22.21■■□□□ 1.15
UBC-201ENST00000339647 ODF2Q5BJF6 829 aa22.21■■□□□ 1.15
UBC-201ENST00000339647 CENPPQ6IPU0 288 aa22.21■■□□□ 1.15
UBC-201ENST00000339647 RAPGEF5Q92565 580 aa22.21■■□□□ 1.15
UBC-201ENST00000339647 C7orf25Q9BPX7 421 aa22.21■■□□□ 1.15
UBC-201ENST00000339647 PCDHA6Q9UN73 950 aa22.21■■□□□ 1.15
UBC-201ENST00000339647 PCDHA8Q9Y5H6 950 aa22.21■■□□□ 1.15
UBC-201ENST00000339647 PAX7P23759 505 aa22.2■■□□□ 1.14
UBC-201ENST00000339647 MEI1Q5TIA1 1274 aa22.2■■□□□ 1.14
UBC-201ENST00000339647 CCDC84Q86UT8 332 aaPredicted RBP22.2■■□□□ 1.14
UBC-201ENST00000339647 NEUROG2Q9H2A3 272 aa22.2■■□□□ 1.14
UBC-201ENST00000339647 GRID2IPA4D2P6 1211 aa22.2■■□□□ 1.14
UBC-201ENST00000339647 DCDC2CA8MYV0 355 aa22.2■■□□□ 1.14
UBC-201ENST00000339647 MYBP10242 640 aa22.2■■□□□ 1.14
UBC-201ENST00000339647 CTNNA1P35221 906 aaKnown RBP22.2■■□□□ 1.14
UBC-201ENST00000339647 SEMA3FQ13275 785 aa22.2■■□□□ 1.14
UBC-201ENST00000339647 LRIG3Q6UXM1 1119 aa22.2■■□□□ 1.14
UBC-201ENST00000339647 USP38Q8NB14 1042 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms