RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 PGM5Q15124 567 aa16.47■□□□□ 0.23
NIPAL3-202ENST00000339255 CALCRLQ16602 461 aa16.47■□□□□ 0.23
NIPAL3-202ENST00000339255 CEP55Q53EZ4 464 aa16.47■□□□□ 0.23
NIPAL3-202ENST00000339255 C4orf32Q8N8J7 132 aa16.47■□□□□ 0.23
NIPAL3-202ENST00000339255 FAM133AQ8N9E0 248 aa16.47■□□□□ 0.23
NIPAL3-202ENST00000339255 ZNF579Q8NAF0 562 aaKnown RBP16.47■□□□□ 0.23
NIPAL3-202ENST00000339255 CFHR5Q9BXR6 569 aa16.47■□□□□ 0.23
NIPAL3-202ENST00000339255 EFCC1Q9HA90 598 aa16.47■□□□□ 0.23
NIPAL3-202ENST00000339255 FBXO2Q9UK22 296 aaPredicted RBP16.47■□□□□ 0.23
NIPAL3-202ENST00000339255 PCDHA7Q9UN72 937 aa16.47■□□□□ 0.23
NIPAL3-202ENST00000339255 MCM3APO60318 1980 aa16.47■□□□□ 0.23
NIPAL3-202ENST00000339255 EIF2AK2P19525 551 aaKnown RBP16.46■□□□□ 0.23
NIPAL3-202ENST00000339255 MARCKSP29966 332 aaPredicted RBP16.46■□□□□ 0.23
NIPAL3-202ENST00000339255 VEGFBP49765 207 aa16.46■□□□□ 0.23
NIPAL3-202ENST00000339255 SLFN12Q8IYM2 578 aa16.46■□□□□ 0.23
NIPAL3-202ENST00000339255 FAM86B1E9PN63 330 aa16.46■□□□□ 0.23
NIPAL3-202ENST00000339255 SLC37A4O43826 429 aa16.46■□□□□ 0.23
NIPAL3-202ENST00000339255 NR3C2P08235 984 aa16.46■□□□□ 0.23
NIPAL3-202ENST00000339255 FAM86B2P0C5J1 330 aa16.46■□□□□ 0.23
NIPAL3-202ENST00000339255 PRR16Q569H4 304 aa16.46■□□□□ 0.23
NIPAL3-202ENST00000339255 AXDND1Q5T1B0 1012 aaPredicted RBP16.46■□□□□ 0.23
NIPAL3-202ENST00000339255 DTHD1Q6ZMT9 781 aa16.46■□□□□ 0.23
NIPAL3-202ENST00000339255 GPR142Q7Z601 462 aa16.46■□□□□ 0.23
NIPAL3-202ENST00000339255 PLEKHH3Q7Z736 793 aa16.46■□□□□ 0.23
NIPAL3-202ENST00000339255 POTEDQ86YR6 584 aa16.46■□□□□ 0.23
NIPAL3-202ENST00000339255 FAM20AQ96MK3 541 aa16.46■□□□□ 0.23
NIPAL3-202ENST00000339255 MTMR9Q96QG7 549 aa16.46■□□□□ 0.23
NIPAL3-202ENST00000339255 RAB34Q9BZG1 259 aa16.46■□□□□ 0.23
NIPAL3-202ENST00000339255 KCNMB3Q9NPA1 279 aa16.46■□□□□ 0.23
NIPAL3-202ENST00000339255 IGLV3-22A0A075B6J6 115 aa16.45■□□□□ 0.22
NIPAL3-202ENST00000339255 SLC15A5A6NIM6 579 aa16.45■□□□□ 0.22
NIPAL3-202ENST00000339255 MEIS1O00470 390 aa16.45■□□□□ 0.22
NIPAL3-202ENST00000339255 LONP1P36776 959 aaKnown RBP16.45■□□□□ 0.22
NIPAL3-202ENST00000339255 ALDH5A1P51649 535 aaPredicted RBP16.45■□□□□ 0.22
NIPAL3-202ENST00000339255 UBXN2AP68543 259 aa16.45■□□□□ 0.22
NIPAL3-202ENST00000339255 GRB14Q14449 540 aa16.45■□□□□ 0.22
NIPAL3-202ENST00000339255 TMEM266Q2M3C6 531 aa16.45■□□□□ 0.22
NIPAL3-202ENST00000339255 VSIG10LQ86VR7 867 aa16.45■□□□□ 0.22
NIPAL3-202ENST00000339255 IL31RAQ8NI17 732 aa16.45■□□□□ 0.22
NIPAL3-202ENST00000339255 LENG9Q96B70 501 aa16.45■□□□□ 0.22
NIPAL3-202ENST00000339255 TMEM60Q9H2L4 133 aa16.45■□□□□ 0.22
NIPAL3-202ENST00000339255 MARCH6O60337 910 aa16.44■□□□□ 0.22
NIPAL3-202ENST00000339255 CMA1P23946 247 aa16.44■□□□□ 0.22
NIPAL3-202ENST00000339255 ADORA2AP29274 412 aa16.44■□□□□ 0.22
NIPAL3-202ENST00000339255 CNTN2Q02246 1040 aa16.44■□□□□ 0.22
NIPAL3-202ENST00000339255 ETNPPLQ8TBG4 499 aa16.44■□□□□ 0.22
NIPAL3-202ENST00000339255 MRPS27Q92552 414 aaKnown RBP16.44■□□□□ 0.22
NIPAL3-202ENST00000339255 CDHR1Q96JP9 859 aa16.44■□□□□ 0.22
NIPAL3-202ENST00000339255 AK8Q96MA6 479 aa16.44■□□□□ 0.22
NIPAL3-202ENST00000339255 MXRA8Q9BRK3 442 aa16.44■□□□□ 0.22
NIPAL3-202ENST00000339255 SLC5A4Q9NY91 659 aa16.44■□□□□ 0.22
NIPAL3-202ENST00000339255 UBIAD1Q9Y5Z9 338 aa16.44■□□□□ 0.22
NIPAL3-202ENST00000339255 DDX49Q9Y6V7 483 aaKnown RBP16.44■□□□□ 0.22
NIPAL3-202ENST00000339255 VWA3AA6NCI4 1184 aa16.43■□□□□ 0.22
NIPAL3-202ENST00000339255 MAFGO15525 162 aa16.43■□□□□ 0.22
NIPAL3-202ENST00000339255 GADD45BO75293 160 aaPredicted RBP16.43■□□□□ 0.22
NIPAL3-202ENST00000339255 EDNRBP24530 442 aa16.43■□□□□ 0.22
NIPAL3-202ENST00000339255 FXR2P51116 673 aaKnown RBP eCLIP16.43■□□□□ 0.22
NIPAL3-202ENST00000339255 MRPS9P82933 396 aaKnown RBP16.43■□□□□ 0.22
NIPAL3-202ENST00000339255 STXBP2Q15833 593 aa16.43■□□□□ 0.22
NIPAL3-202ENST00000339255 KLHL40Q2TBA0 621 aa16.43■□□□□ 0.22
NIPAL3-202ENST00000339255 GNPTABQ3T906 1256 aa16.43■□□□□ 0.22
NIPAL3-202ENST00000339255 ZNF467Q7Z7K2 595 aaPredicted RBP16.43■□□□□ 0.22
NIPAL3-202ENST00000339255 PLA2G4DQ86XP0 818 aa16.43■□□□□ 0.22
NIPAL3-202ENST00000339255 GPRASP2Q96D09 838 aa16.43■□□□□ 0.22
NIPAL3-202ENST00000339255 DIS3Q9Y2L1 958 aaKnown RBP16.43■□□□□ 0.22
NIPAL3-202ENST00000339255 CASP8AP2Q9UKL3 1982 aa16.43■□□□□ 0.22
NIPAL3-202ENST00000339255 PGK2P07205 417 aa16.43■□□□□ 0.22
NIPAL3-202ENST00000339255 MYCLP12524 364 aaPredicted RBP16.43■□□□□ 0.22
NIPAL3-202ENST00000339255 HSPA6P17066 643 aa16.43■□□□□ 0.22
NIPAL3-202ENST00000339255 PDE4DQ08499 809 aa16.43■□□□□ 0.22
NIPAL3-202ENST00000339255 MTMR1Q13613 665 aa16.43■□□□□ 0.22
NIPAL3-202ENST00000339255 RESP18Q5W5W9 173 aa16.43■□□□□ 0.22
NIPAL3-202ENST00000339255 CCDC73Q6ZRK6 1079 aa16.43■□□□□ 0.22
NIPAL3-202ENST00000339255 SOCS4Q8WXH5 440 aa16.43■□□□□ 0.22
NIPAL3-202ENST00000339255 HAS1Q92839 578 aa16.43■□□□□ 0.22
NIPAL3-202ENST00000339255 INPP4AQ96PE3 977 aaPredicted RBP16.43■□□□□ 0.22
NIPAL3-202ENST00000339255 PURBQ96QR8 312 aaKnown RBP16.43■□□□□ 0.22
NIPAL3-202ENST00000339255 R3HDMLQ9H3Y0 253 aa16.43■□□□□ 0.22
NIPAL3-202ENST00000339255 JADE2Q9NQC1 790 aa16.43■□□□□ 0.22
NIPAL3-202ENST00000339255 MRVI1Q9Y6F6 885 aa16.43■□□□□ 0.22
NIPAL3-202ENST00000339255 ASTN1O14525 1302 aa16.42■□□□□ 0.22
NIPAL3-202ENST00000339255 SOWAHBA6NEL2 793 aa16.42■□□□□ 0.22
NIPAL3-202ENST00000339255 ASB14A6NK59 587 aa16.42■□□□□ 0.22
NIPAL3-202ENST00000339255 EIF3JO75822 258 aaKnown RBP16.42■□□□□ 0.22
NIPAL3-202ENST00000339255 ITGB5P18084 799 aa16.42■□□□□ 0.22
NIPAL3-202ENST00000339255 PDIA5Q14554 519 aa16.42■□□□□ 0.22
NIPAL3-202ENST00000339255 NLRX1Q86UT6 975 aa16.42■□□□□ 0.22
NIPAL3-202ENST00000339255 CYP2W1Q8TAV3 490 aa16.42■□□□□ 0.22
NIPAL3-202ENST00000339255 CLIC6Q96NY7 704 aa16.42■□□□□ 0.22
NIPAL3-202ENST00000339255 FAM13BQ9NYF5 915 aa16.42■□□□□ 0.22
NIPAL3-202ENST00000339255 PCDHA12Q9UN75 941 aa16.42■□□□□ 0.22
NIPAL3-202ENST00000339255 FAM237AA0A1B0GTK4 181 aa16.41■□□□□ 0.22
NIPAL3-202ENST00000339255 IPO5O00410 1097 aaKnown RBP16.41■□□□□ 0.22
NIPAL3-202ENST00000339255 TXLNAP40222 546 aa16.41■□□□□ 0.22
NIPAL3-202ENST00000339255 TXKP42681 527 aa16.41■□□□□ 0.22
NIPAL3-202ENST00000339255 FAM160A1Q05DH4 1040 aa16.41■□□□□ 0.22
NIPAL3-202ENST00000339255 ZNF792Q3KQV3 632 aa16.41■□□□□ 0.22
NIPAL3-202ENST00000339255 SHC4Q6S5L8 630 aa16.41■□□□□ 0.22
NIPAL3-202ENST00000339255 DPP9Q86TI2 863 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms