RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 CALM3P0DP25 149 aa22.49■■□□□ 1.19
RUNX3-202ENST00000338888 TMOD1P28289 359 aa22.49■■□□□ 1.19
RUNX3-202ENST00000338888 PACSIN2Q9UNF0 486 aaPredicted RBP22.49■■□□□ 1.19
RUNX3-202ENST00000338888 VWA3BQ502W6 1294 aa22.48■■□□□ 1.19
RUNX3-202ENST00000338888 ARFGAP2Q8N6H7 521 aa22.48■■□□□ 1.19
RUNX3-202ENST00000338888 BCCIPQ9P287 314 aaKnown RBP eCLIP22.48■■□□□ 1.19
RUNX3-202ENST00000338888 TRMT112Q9UI30 125 aaKnown RBP22.48■■□□□ 1.19
RUNX3-202ENST00000338888 TPX2Q9ULW0 747 aaKnown RBP22.48■■□□□ 1.19
RUNX3-202ENST00000338888 NMT2O60551 498 aa22.48■■□□□ 1.19
RUNX3-202ENST00000338888 PALMO75781 387 aa22.48■■□□□ 1.19
RUNX3-202ENST00000338888 HLTFQ14527 1009 aaKnown RBP eCLIP22.48■■□□□ 1.19
RUNX3-202ENST00000338888 KLHL7Q8IXQ5 586 aa22.48■■□□□ 1.19
RUNX3-202ENST00000338888 C1orf131Q8NDD1 294 aaKnown RBP22.48■■□□□ 1.19
RUNX3-202ENST00000338888 NDST4Q9H3R1 872 aa22.48■■□□□ 1.19
RUNX3-202ENST00000338888 RNF14Q9UBS8 474 aa22.48■■□□□ 1.19
RUNX3-202ENST00000338888 AHDC1Q5TGY3 1603 aaPredicted RBP22.48■■□□□ 1.19
RUNX3-202ENST00000338888 KCPQ6ZWJ8 1503 aa22.48■■□□□ 1.19
RUNX3-202ENST00000338888 RAD51CO43502 376 aa22.47■■□□□ 1.19
RUNX3-202ENST00000338888 MYL1P05976 194 aa22.47■■□□□ 1.19
RUNX3-202ENST00000338888 ASIC1P78348 528 aa22.47■■□□□ 1.19
RUNX3-202ENST00000338888 GIGYF2Q6Y7W6 1299 aaKnown RBP22.47■■□□□ 1.19
RUNX3-202ENST00000338888 BLIDQ8IZY5 108 aa22.47■■□□□ 1.19
RUNX3-202ENST00000338888 SGSM3Q96HU1 749 aa22.47■■□□□ 1.19
RUNX3-202ENST00000338888 GCOM1H8Y6P7 765 aaPredicted RBP22.47■■□□□ 1.19
RUNX3-202ENST00000338888 MYZAPP0CAP1 466 aa22.47■■□□□ 1.19
RUNX3-202ENST00000338888 GCFC2P16383 781 aaKnown RBP22.47■■□□□ 1.19
RUNX3-202ENST00000338888 CDC37Q16543 378 aaPredicted RBP22.47■■□□□ 1.19
RUNX3-202ENST00000338888 PFKFB3Q16875 520 aaPredicted RBP22.47■■□□□ 1.19
RUNX3-202ENST00000338888 ANKRD20A8PQ5CZ79 823 aa22.47■■□□□ 1.19
RUNX3-202ENST00000338888 TSKSQ9UJT2 592 aa22.47■■□□□ 1.19
RUNX3-202ENST00000338888 ANAPC4Q9UJX5 808 aa22.47■■□□□ 1.19
RUNX3-202ENST00000338888 CCDC189A1A4V9 331 aa22.46■■□□□ 1.19
RUNX3-202ENST00000338888 SRRM3A6NNA2 597 aaPredicted RBP22.46■■□□□ 1.19
RUNX3-202ENST00000338888 HSPA9P38646 679 aaKnown RBP22.46■■□□□ 1.19
RUNX3-202ENST00000338888 TDRD12Q587J7 1177 aaKnown RBP22.46■■□□□ 1.19
RUNX3-202ENST00000338888 GPKOWQ92917 476 aaPredicted RBP eCLIP22.46■■□□□ 1.19
RUNX3-202ENST00000338888 ZNF622Q969S3 477 aaKnown RBP eCLIP22.46■■□□□ 1.19
RUNX3-202ENST00000338888 SEMA6BQ9H3T3 888 aa22.46■■□□□ 1.19
RUNX3-202ENST00000338888 LEMD3Q9Y2U8 911 aa22.46■■□□□ 1.19
RUNX3-202ENST00000338888 DNAJC10Q8IXB1 793 aa22.46■■□□□ 1.19
RUNX3-202ENST00000338888 RNF10Q8N5U6 811 aaKnown RBP22.46■■□□□ 1.19
RUNX3-202ENST00000338888 CCDC47Q96A33 483 aaKnown RBP22.46■■□□□ 1.19
RUNX3-202ENST00000338888 SEC16BQ96JE7 1060 aa22.46■■□□□ 1.19
RUNX3-202ENST00000338888 TRIM9Q9C026 710 aa22.46■■□□□ 1.19
RUNX3-202ENST00000338888 COL14A1Q05707 1796 aaKnown RBP22.46■■□□□ 1.19
RUNX3-202ENST00000338888 FRMD3A2A2Y4 597 aa22.45■■□□□ 1.19
RUNX3-202ENST00000338888 OPLAHO14841 1288 aa22.45■■□□□ 1.19
RUNX3-202ENST00000338888 TRAPPC3O43617 180 aa22.45■■□□□ 1.19
RUNX3-202ENST00000338888 DDAH1O94760 285 aa22.45■■□□□ 1.19
RUNX3-202ENST00000338888 PLCG1P19174 1290 aa22.45■■□□□ 1.19
RUNX3-202ENST00000338888 HSD17B3P37058 310 aa22.45■■□□□ 1.19
RUNX3-202ENST00000338888 KCTD19Q17RG1 926 aaPredicted RBP22.45■■□□□ 1.19
RUNX3-202ENST00000338888 ASTE1Q2TB18 679 aaPredicted RBP22.45■■□□□ 1.19
RUNX3-202ENST00000338888 ODF2Q5BJF6 829 aa22.45■■□□□ 1.19
RUNX3-202ENST00000338888 IQCDQ96DY2 449 aa22.45■■□□□ 1.19
RUNX3-202ENST00000338888 ABCF2Q9UG63 623 aa22.45■■□□□ 1.19
RUNX3-202ENST00000338888 MROH5Q6ZUA9 1318 aa22.45■■□□□ 1.18
RUNX3-202ENST00000338888 CLSTN1O94985 981 aa22.45■■□□□ 1.18
RUNX3-202ENST00000338888 EHHADHQ08426 723 aa22.45■■□□□ 1.18
RUNX3-202ENST00000338888 BAP1Q92560 729 aa22.45■■□□□ 1.18
RUNX3-202ENST00000338888 CCSER1Q9C0I3 900 aa22.45■■□□□ 1.18
RUNX3-202ENST00000338888 SLC39A2Q9NP94 309 aa22.45■■□□□ 1.18
RUNX3-202ENST00000338888 PLCB1Q9NQ66 1216 aa22.45■■□□□ 1.18
RUNX3-202ENST00000338888 SLC12A6Q9UHW9 1150 aa22.45■■□□□ 1.18
RUNX3-202ENST00000338888 COL16A1Q07092 1604 aaPredicted RBP22.45■■□□□ 1.18
RUNX3-202ENST00000338888 MAGEB6P1A0A0J9YX57 407 aa22.44■■□□□ 1.18
RUNX3-202ENST00000338888 TMCO5BA8MYB1 307 aa22.44■■□□□ 1.18
RUNX3-202ENST00000338888 EZRP15311 586 aaKnown RBP22.44■■□□□ 1.18
RUNX3-202ENST00000338888 PAX7P23759 505 aa22.44■■□□□ 1.18
RUNX3-202ENST00000338888 CACNA2D4Q7Z3S7 1137 aa22.44■■□□□ 1.18
RUNX3-202ENST00000338888 KIRREL3Q8IZU9 778 aa22.44■■□□□ 1.18
RUNX3-202ENST00000338888 TOGARAM1Q9Y4F4 1720 aa22.44■■□□□ 1.18
RUNX3-202ENST00000338888 SCTRP47872 440 aa22.44■■□□□ 1.18
RUNX3-202ENST00000338888 PROCA1Q8NCQ7 364 aaPredicted RBP22.44■■□□□ 1.18
RUNX3-202ENST00000338888 PDE8AO60658 829 aa22.44■■□□□ 1.18
RUNX3-202ENST00000338888 TOM1O60784 492 aa22.44■■□□□ 1.18
RUNX3-202ENST00000338888 MRPL12P52815 198 aaKnown RBP22.44■■□□□ 1.18
RUNX3-202ENST00000338888 DDX42Q86XP3 938 aaKnown RBP eCLIP22.44■■□□□ 1.18
RUNX3-202ENST00000338888 CCDC50Q8IVM0 306 aa22.44■■□□□ 1.18
RUNX3-202ENST00000338888 TAF1DQ9H5J8 278 aaPredicted RBP22.44■■□□□ 1.18
RUNX3-202ENST00000338888 NLRC4Q9NPP4 1024 aa22.44■■□□□ 1.18
RUNX3-202ENST00000338888 CCDC194A0A1B0GVG4 234 aa22.43■■□□□ 1.18
RUNX3-202ENST00000338888 CTNNA1P35221 906 aaKnown RBP22.43■■□□□ 1.18
RUNX3-202ENST00000338888 CLNS1AP54105 237 aaKnown RBP22.43■■□□□ 1.18
RUNX3-202ENST00000338888 ERVK-9P63128 1117 aa22.43■■□□□ 1.18
RUNX3-202ENST00000338888 EVX2Q03828 476 aa22.43■■□□□ 1.18
RUNX3-202ENST00000338888 UAP1Q16222 522 aaPredicted RBP22.43■■□□□ 1.18
RUNX3-202ENST00000338888 INF2Q27J81 1249 aa22.43■■□□□ 1.18
RUNX3-202ENST00000338888 KIAA0895Q8NCT3 520 aa22.43■■□□□ 1.18
RUNX3-202ENST00000338888 CNOT8Q9UFF9 292 aaKnown RBP22.43■■□□□ 1.18
RUNX3-202ENST00000338888 RPSAP08865 295 aaKnown RBP22.43■■□□□ 1.18
RUNX3-202ENST00000338888 CALML3P27482 149 aa22.43■■□□□ 1.18
RUNX3-202ENST00000338888 BYSLQ13895 437 aaKnown RBP22.43■■□□□ 1.18
RUNX3-202ENST00000338888 PPP2R5AQ15172 486 aa22.43■■□□□ 1.18
RUNX3-202ENST00000338888 FAM47AQ5JRC9 791 aa22.43■■□□□ 1.18
RUNX3-202ENST00000338888 PDXDC1Q6P996 788 aa22.43■■□□□ 1.18
RUNX3-202ENST00000338888 CCDC84Q86UT8 332 aaPredicted RBP22.43■■□□□ 1.18
RUNX3-202ENST00000338888 CABP7Q86V35 215 aa22.43■■□□□ 1.18
RUNX3-202ENST00000338888 CACNA2D3Q8IZS8 1091 aa22.43■■□□□ 1.18
RUNX3-202ENST00000338888 INPP4AQ96PE3 977 aaPredicted RBP22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms