RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 GLI1P08151 1106 aa15.59■□□□□ 0.09
PCDH8-201ENST00000338862 TNNC1P63316 161 aa15.59■□□□□ 0.09
PCDH8-201ENST00000338862 CYP4A11Q02928 519 aa15.59■□□□□ 0.09
PCDH8-201ENST00000338862 SF3B2Q13435 895 aaKnown RBP15.59■□□□□ 0.09
PCDH8-201ENST00000338862 DDB1Q16531 1140 aa15.59■□□□□ 0.09
PCDH8-201ENST00000338862 MMS22LQ6ZRQ5 1243 aa15.59■□□□□ 0.09
PCDH8-201ENST00000338862 LARP4BQ92615 738 aaKnown RBP15.59■□□□□ 0.09
PCDH8-201ENST00000338862 UBR1Q8IWV7 1749 aa15.59■□□□□ 0.09
PCDH8-201ENST00000338862 FGFR2P21802 821 aa15.58■□□□□ 0.09
PCDH8-201ENST00000338862 ZNF76P36508 570 aa15.58■□□□□ 0.09
PCDH8-201ENST00000338862 RBM5P52756 815 aaKnown RBP eCLIP15.58■□□□□ 0.09
PCDH8-201ENST00000338862 ASIC2Q16515 512 aa15.58■□□□□ 0.09
PCDH8-201ENST00000338862 TBC1D10BQ4KMP7 808 aaPredicted RBP15.58■□□□□ 0.09
PCDH8-201ENST00000338862 TTI2Q6NXR4 508 aa15.58■□□□□ 0.09
PCDH8-201ENST00000338862 PACSIN1Q9BY11 444 aa15.58■□□□□ 0.09
PCDH8-201ENST00000338862 UBXN6Q9BZV1 441 aa15.58■□□□□ 0.09
PCDH8-201ENST00000338862 BAIAP2L1Q9UHR4 511 aa15.58■□□□□ 0.09
PCDH8-201ENST00000338862 SLCO1A2P46721 670 aa15.58■□□□□ 0.08
PCDH8-201ENST00000338862 TRAPPC10P48553 1259 aa15.58■□□□□ 0.08
PCDH8-201ENST00000338862 DDX12PQ92771 950 aa15.58■□□□□ 0.08
PCDH8-201ENST00000338862 MTMR8Q96EF0 704 aa15.58■□□□□ 0.08
PCDH8-201ENST00000338862 SETDB2Q96T68 719 aa15.58■□□□□ 0.08
PCDH8-201ENST00000338862 MINPP1Q9UNW1 487 aa15.58■□□□□ 0.08
PCDH8-201ENST00000338862 NOVA2Q9UNW9 492 aaKnown RBP15.58■□□□□ 0.08
PCDH8-201ENST00000338862 KIAA1024Q9UPX6 916 aa15.58■□□□□ 0.08
PCDH8-201ENST00000338862 EIF4E1BA6NMX2 242 aaKnown RBP15.58■□□□□ 0.08
PCDH8-201ENST00000338862 KRIT1O00522 736 aa15.58■□□□□ 0.08
PCDH8-201ENST00000338862 ACTN1P12814 892 aa15.58■□□□□ 0.08
PCDH8-201ENST00000338862 BRINP3Q76B58 766 aa15.58■□□□□ 0.08
PCDH8-201ENST00000338862 MYOCDQ8IZQ8 938 aa15.58■□□□□ 0.08
PCDH8-201ENST00000338862 DUSP9Q99956 384 aaKnown RBP15.58■□□□□ 0.08
PCDH8-201ENST00000338862 TMEM47Q9BQJ4 181 aa15.58■□□□□ 0.08
PCDH8-201ENST00000338862 ZNF219Q9P2Y4 722 aaPredicted RBP15.58■□□□□ 0.08
PCDH8-201ENST00000338862 GGT7Q9UJ14 662 aa15.58■□□□□ 0.08
PCDH8-201ENST00000338862 PNPLA7Q6ZV29 1317 aa15.58■□□□□ 0.08
PCDH8-201ENST00000338862 COPB2P35606 906 aa15.57■□□□□ 0.08
PCDH8-201ENST00000338862 IL6STP40189 918 aaPredicted RBP15.57■□□□□ 0.08
PCDH8-201ENST00000338862 NAALADL2Q58DX5 795 aa15.57■□□□□ 0.08
PCDH8-201ENST00000338862 CCDC91Q7Z6B0 441 aa15.57■□□□□ 0.08
PCDH8-201ENST00000338862 CD248Q9HCU0 757 aa15.57■□□□□ 0.08
PCDH8-201ENST00000338862 SLAIN2Q9P270 581 aa15.57■□□□□ 0.08
PCDH8-201ENST00000338862 SRP68Q9UHB9 627 aaKnown RBP15.57■□□□□ 0.08
PCDH8-201ENST00000338862 ATP8A1Q9Y2Q0 1164 aa15.57■□□□□ 0.08
PCDH8-201ENST00000338862 NFAT5O94916 1531 aa15.57■□□□□ 0.08
PCDH8-201ENST00000338862 LOC102724428A0A0B4J2F2 783 aa15.57■□□□□ 0.08
PCDH8-201ENST00000338862 SFI1A8K8P3 1242 aa15.57■□□□□ 0.08
PCDH8-201ENST00000338862 CLIC2O15247 247 aa15.57■□□□□ 0.08
PCDH8-201ENST00000338862 EIF3HO15372 352 aaKnown RBP eCLIP15.57■□□□□ 0.08
PCDH8-201ENST00000338862 CHMP2AO43633 222 aa15.57■□□□□ 0.08
PCDH8-201ENST00000338862 VIMP08670 466 aaKnown RBP15.57■□□□□ 0.08
PCDH8-201ENST00000338862 SIK1P57059 783 aa15.57■□□□□ 0.08
PCDH8-201ENST00000338862 SNAP25P60880 206 aa15.57■□□□□ 0.08
PCDH8-201ENST00000338862 PEX26Q7Z412 305 aa15.57■□□□□ 0.08
PCDH8-201ENST00000338862 TXNRD3Q86VQ6 643 aa15.57■□□□□ 0.08
PCDH8-201ENST00000338862 KIRREL3Q8IZU9 778 aa15.57■□□□□ 0.08
PCDH8-201ENST00000338862 U2AF1L4Q8WU68 220 aaKnown RBP15.57■□□□□ 0.08
PCDH8-201ENST00000338862 DNAJC7Q99615 494 aa15.57■□□□□ 0.08
PCDH8-201ENST00000338862 PLEKHG2Q9H7P9 1386 aa15.57■□□□□ 0.08
PCDH8-201ENST00000338862 MYMKA6NI61 221 aa15.57■□□□□ 0.08
PCDH8-201ENST00000338862 ZNF263O14978 683 aa15.57■□□□□ 0.08
PCDH8-201ENST00000338862 MAN2A1Q16706 1144 aa15.57■□□□□ 0.08
PCDH8-201ENST00000338862 ARL6IP4Q66PJ3 421 aaKnown RBP15.57■□□□□ 0.08
PCDH8-201ENST00000338862 FNBP4Q8N3X1 1017 aaPredicted RBP15.57■□□□□ 0.08
PCDH8-201ENST00000338862 GIMAP8Q8ND71 665 aaPredicted RBP15.57■□□□□ 0.08
PCDH8-201ENST00000338862 RIOK1Q9BRS2 568 aaKnown RBP15.57■□□□□ 0.08
PCDH8-201ENST00000338862 SH2D4AQ9H788 454 aa15.57■□□□□ 0.08
PCDH8-201ENST00000338862 KLRC1P26715 233 aa15.56■□□□□ 0.08
PCDH8-201ENST00000338862 HNRNPH1P31943 449 aaKnown RBP15.56■□□□□ 0.08
PCDH8-201ENST00000338862 ADAM9Q13443 819 aa15.56■□□□□ 0.08
PCDH8-201ENST00000338862 ARHGAP44Q17R89 818 aa15.56■□□□□ 0.08
PCDH8-201ENST00000338862 PAPD7Q5XG87 772 aaKnown RBP15.56■□□□□ 0.08
PCDH8-201ENST00000338862 PANK4Q9NVE7 773 aa15.56■□□□□ 0.08
PCDH8-201ENST00000338862 PDS5AQ29RF7 1337 aaKnown RBP15.56■□□□□ 0.08
PCDH8-201ENST00000338862 E9PMD0 336 aa15.56■□□□□ 0.08
PCDH8-201ENST00000338862 KRT25Q7Z3Z0 450 aa15.56■□□□□ 0.08
PCDH8-201ENST00000338862 CREG2Q8IUH2 290 aa15.56■□□□□ 0.08
PCDH8-201ENST00000338862 SEMA6BQ9H3T3 888 aa15.56■□□□□ 0.08
PCDH8-201ENST00000338862 TUBGCP6Q96RT7 1819 aa15.56■□□□□ 0.08
PCDH8-201ENST00000338862 NF2P35240 595 aa15.56■□□□□ 0.08
PCDH8-201ENST00000338862 HDLBPQ00341 1268 aaKnown RBP15.56■□□□□ 0.08
PCDH8-201ENST00000338862 FAM26FQ5R3K3 315 aa15.56■□□□□ 0.08
PCDH8-201ENST00000338862 SLC51AQ86UW1 340 aa15.56■□□□□ 0.08
PCDH8-201ENST00000338862 ARPP21Q9UBL0 812 aaPredicted RBP15.56■□□□□ 0.08
PCDH8-201ENST00000338862 A0A1W2PQC6 194 aa15.55■□□□□ 0.08
PCDH8-201ENST00000338862 AGPSO00116 658 aa15.55■□□□□ 0.08
PCDH8-201ENST00000338862 FAM83BQ5T0W9 1011 aa15.55■□□□□ 0.08
PCDH8-201ENST00000338862 GPBP1Q86WP2 473 aa15.55■□□□□ 0.08
PCDH8-201ENST00000338862 NSUN4Q96CB9 384 aaKnown RBP15.55■□□□□ 0.08
PCDH8-201ENST00000338862 PAIP2Q9BPZ3 127 aaKnown RBP15.55■□□□□ 0.08
PCDH8-201ENST00000338862 PKD2L1Q9P0L9 805 aa15.55■□□□□ 0.08
PCDH8-201ENST00000338862 KCNQ2O43526 872 aa15.55■□□□□ 0.08
PCDH8-201ENST00000338862 GBP2P32456 591 aaPredicted RBP15.55■□□□□ 0.08
PCDH8-201ENST00000338862 PABPC4Q13310 644 aaKnown RBP eCLIP15.55■□□□□ 0.08
PCDH8-201ENST00000338862 MCTP2Q6DN12 878 aa15.55■□□□□ 0.08
PCDH8-201ENST00000338862 CTNNBL1Q8WYA6 563 aaPredicted RBP15.55■□□□□ 0.08
PCDH8-201ENST00000338862 LRRC10BA6NIK2 292 aa15.55■□□□□ 0.08
PCDH8-201ENST00000338862 USP17L5A8MUK1 530 aa15.55■□□□□ 0.08
PCDH8-201ENST00000338862 RHOBTB3O94955 611 aa15.55■□□□□ 0.08
PCDH8-201ENST00000338862 USH1GQ495M9 461 aa15.55■□□□□ 0.08
PCDH8-201ENST00000338862 PARP10Q53GL7 1025 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms