RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 ATP6V0A2Q9Y487 856 aa16.77■□□□□ 0.27
TNFSF13-201ENST00000338784 SAR1BQ9Y6B6 198 aa16.77■□□□□ 0.27
TNFSF13-201ENST00000338784 MYH1P12882 1939 aa16.76■□□□□ 0.27
TNFSF13-201ENST00000338784 NKRFO15226 690 aaKnown RBP eCLIP16.76■□□□□ 0.27
TNFSF13-201ENST00000338784 IDEP14735 1019 aa16.76■□□□□ 0.27
TNFSF13-201ENST00000338784 CLK2P49760 499 aaKnown RBP16.76■□□□□ 0.27
TNFSF13-201ENST00000338784 PSMD2Q13200 908 aa16.76■□□□□ 0.27
TNFSF13-201ENST00000338784 UBE2SQ16763 222 aa16.76■□□□□ 0.27
TNFSF13-201ENST00000338784 TMEM119Q4V9L6 283 aa16.76■□□□□ 0.27
TNFSF13-201ENST00000338784 PAPD7Q5XG87 772 aaKnown RBP16.76■□□□□ 0.27
TNFSF13-201ENST00000338784 CERS5Q8N5B7 392 aa16.76■□□□□ 0.27
TNFSF13-201ENST00000338784 DDX12PQ92771 950 aa16.76■□□□□ 0.27
TNFSF13-201ENST00000338784 NUDT12Q9BQG2 462 aa16.76■□□□□ 0.27
TNFSF13-201ENST00000338784 ZC3H12CQ9C0D7 883 aaKnown RBP16.76■□□□□ 0.27
TNFSF13-201ENST00000338784 GBP3Q9H0R5 595 aa16.76■□□□□ 0.27
TNFSF13-201ENST00000338784 DDX25Q9UHL0 483 aaKnown RBP16.76■□□□□ 0.27
TNFSF13-201ENST00000338784 PPP1R11O60927 126 aaPredicted RBP16.75■□□□□ 0.27
TNFSF13-201ENST00000338784 ATP1A1P05023 1023 aaKnown RBP16.75■□□□□ 0.27
TNFSF13-201ENST00000338784 CYP2C19P33261 490 aa16.75■□□□□ 0.27
TNFSF13-201ENST00000338784 SHMT1P34896 483 aa16.75■□□□□ 0.27
TNFSF13-201ENST00000338784 MAN2A1Q16706 1144 aa16.75■□□□□ 0.27
TNFSF13-201ENST00000338784 CCDC84Q86UT8 332 aaPredicted RBP16.75■□□□□ 0.27
TNFSF13-201ENST00000338784 NOA1Q8NC60 698 aaKnown RBP16.75■□□□□ 0.27
TNFSF13-201ENST00000338784 CCDC42Q96M95 316 aa16.75■□□□□ 0.27
TNFSF13-201ENST00000338784 LACRTQ9GZZ8 138 aa16.75■□□□□ 0.27
TNFSF13-201ENST00000338784 ABCB6Q9NP58 842 aa16.75■□□□□ 0.27
TNFSF13-201ENST00000338784 HDAC6Q9UBN7 1215 aa16.75■□□□□ 0.27
TNFSF13-201ENST00000338784 PLAGL2Q9UPG8 496 aa16.75■□□□□ 0.27
TNFSF13-201ENST00000338784 C10orf71Q711Q0 1435 aa16.75■□□□□ 0.27
TNFSF13-201ENST00000338784 RCCD1A6NED2 376 aa16.75■□□□□ 0.27
TNFSF13-201ENST00000338784 ZBTB5O15062 677 aa16.75■□□□□ 0.27
TNFSF13-201ENST00000338784 MARCH6O60337 910 aa16.75■□□□□ 0.27
TNFSF13-201ENST00000338784 HNRNPH3P31942 346 aaKnown RBP16.75■□□□□ 0.27
TNFSF13-201ENST00000338784 VSNL1P62760 191 aa16.75■□□□□ 0.27
TNFSF13-201ENST00000338784 GPS2Q13227 327 aa16.75■□□□□ 0.27
TNFSF13-201ENST00000338784 SPA17Q15506 151 aa16.75■□□□□ 0.27
TNFSF13-201ENST00000338784 TTBK2Q6IQ55 1244 aa16.75■□□□□ 0.27
TNFSF13-201ENST00000338784 TSGA10Q9BZW7 698 aa16.75■□□□□ 0.27
TNFSF13-201ENST00000338784 L1RE1Q9UN81 338 aa16.75■□□□□ 0.27
TNFSF13-201ENST00000338784 SIK3Q9Y2K2 1263 aa16.75■□□□□ 0.27
TNFSF13-201ENST00000338784 MPHOSPH10O00566 681 aaKnown RBP16.74■□□□□ 0.27
TNFSF13-201ENST00000338784 HLA-DOAP06340 250 aa16.74■□□□□ 0.27
TNFSF13-201ENST00000338784 GCFC2P16383 781 aaKnown RBP16.74■□□□□ 0.27
TNFSF13-201ENST00000338784 VAV2P52735 878 aa16.74■□□□□ 0.27
TNFSF13-201ENST00000338784 EHHADHQ08426 723 aa16.74■□□□□ 0.27
TNFSF13-201ENST00000338784 KIF5AQ12840 1032 aa16.74■□□□□ 0.27
TNFSF13-201ENST00000338784 CCDC96Q2M329 555 aa16.74■□□□□ 0.27
TNFSF13-201ENST00000338784 KCNK18Q7Z418 384 aa16.74■□□□□ 0.27
TNFSF13-201ENST00000338784 TSG101Q99816 390 aa16.74■□□□□ 0.27
TNFSF13-201ENST00000338784 PSTPIP2Q9H939 334 aa16.74■□□□□ 0.27
TNFSF13-201ENST00000338784 ZCCHC17Q9NP64 241 aaKnown RBP16.74■□□□□ 0.27
TNFSF13-201ENST00000338784 ANO9A1A5B4 782 aa16.73■□□□□ 0.27
TNFSF13-201ENST00000338784 USP17L10C9JJH3 530 aa16.73■□□□□ 0.27
TNFSF13-201ENST00000338784 SLC16A2P36021 539 aa16.73■□□□□ 0.27
TNFSF13-201ENST00000338784 SCNN1DP51172 638 aa16.73■□□□□ 0.27
TNFSF13-201ENST00000338784 ATP2B2Q01814 1243 aa16.73■□□□□ 0.27
TNFSF13-201ENST00000338784 CYP27A1Q02318 531 aa16.73■□□□□ 0.27
TNFSF13-201ENST00000338784 SEPT2Q15019 361 aa16.73■□□□□ 0.27
TNFSF13-201ENST00000338784 CDC42EP5Q6NZY7 148 aa16.73■□□□□ 0.27
TNFSF13-201ENST00000338784 WDR93Q6P2C0 686 aa16.73■□□□□ 0.27
TNFSF13-201ENST00000338784 FOXR2Q6PJQ5 311 aa16.73■□□□□ 0.27
TNFSF13-201ENST00000338784 MSL3Q8N5Y2 521 aaKnown RBP16.73■□□□□ 0.27
TNFSF13-201ENST00000338784 HAS1Q92839 578 aa16.73■□□□□ 0.27
TNFSF13-201ENST00000338784 RPGRIP1Q96KN7 1286 aa16.73■□□□□ 0.27
TNFSF13-201ENST00000338784 PURBQ96QR8 312 aaKnown RBP16.73■□□□□ 0.27
TNFSF13-201ENST00000338784 NAP1L4Q99733 375 aaKnown RBP16.73■□□□□ 0.27
TNFSF13-201ENST00000338784 FAM207AQ9NSI2 230 aaPredicted RBP16.73■□□□□ 0.27
TNFSF13-201ENST00000338784 CCDC66A2RUB6 948 aa16.73■□□□□ 0.27
TNFSF13-201ENST00000338784 CKAP4Q07065 602 aaKnown RBP16.73■□□□□ 0.27
TNFSF13-201ENST00000338784 ECM1Q16610 540 aa16.73■□□□□ 0.27
TNFSF13-201ENST00000338784 HHIPL2Q6UWX4 724 aa16.73■□□□□ 0.27
TNFSF13-201ENST00000338784 LRRC55Q6ZSA7 311 aa16.73■□□□□ 0.27
TNFSF13-201ENST00000338784 KCTD1Q719H9 257 aa16.73■□□□□ 0.27
TNFSF13-201ENST00000338784 SECISBP2LQ93073 1101 aaKnown RBP16.73■□□□□ 0.27
TNFSF13-201ENST00000338784 MTMR8Q96EF0 704 aa16.73■□□□□ 0.27
TNFSF13-201ENST00000338784 MXD3Q9BW11 206 aa16.73■□□□□ 0.27
TNFSF13-201ENST00000338784 MMRN2Q9H8L6 949 aa16.73■□□□□ 0.27
TNFSF13-201ENST00000338784 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.73■□□□□ 0.27
TNFSF13-201ENST00000338784 PCDHA12Q9UN75 941 aa16.73■□□□□ 0.27
TNFSF13-201ENST00000338784 SRGAP2O75044 1071 aa16.72■□□□□ 0.27
TNFSF13-201ENST00000338784 EIF3JO75822 258 aaKnown RBP16.72■□□□□ 0.27
TNFSF13-201ENST00000338784 C2CD5Q86YS7 1000 aa16.72■□□□□ 0.27
TNFSF13-201ENST00000338784 MYOCDQ8IZQ8 938 aa16.72■□□□□ 0.27
TNFSF13-201ENST00000338784 PROM2Q8N271 834 aa16.72■□□□□ 0.27
TNFSF13-201ENST00000338784 TEKT1Q969V4 418 aa16.72■□□□□ 0.27
TNFSF13-201ENST00000338784 MMS19Q96T76 1030 aa16.72■□□□□ 0.27
TNFSF13-201ENST00000338784 NT5C3AQ9H0P0 336 aa16.72■□□□□ 0.27
TNFSF13-201ENST00000338784 GLT8D2Q9H1C3 349 aa16.72■□□□□ 0.27
TNFSF13-201ENST00000338784 BMP2KQ9NSY1 1161 aaPredicted RBP16.72■□□□□ 0.27
TNFSF13-201ENST00000338784 DUSP10Q9Y6W6 482 aa16.72■□□□□ 0.27
TNFSF13-201ENST00000338784 LRRC37AA6NMS7 1700 aa16.72■□□□□ 0.27
TNFSF13-201ENST00000338784 LTBP1Q14766 1721 aa16.71■□□□□ 0.27
TNFSF13-201ENST00000338784 FOCADQ5VW36 1801 aa16.71■□□□□ 0.27
TNFSF13-201ENST00000338784 MACROD2A1Z1Q3 448 aa16.71■□□□□ 0.27
TNFSF13-201ENST00000338784 ERICH4A6NGS2 130 aa16.71■□□□□ 0.27
TNFSF13-201ENST00000338784 EPHB6O15197 1021 aa16.71■□□□□ 0.27
TNFSF13-201ENST00000338784 USO1O60763 962 aaKnown RBP16.71■□□□□ 0.27
TNFSF13-201ENST00000338784 LRRC41Q15345 812 aa16.71■□□□□ 0.27
TNFSF13-201ENST00000338784 DOK7Q18PE1 504 aa16.71■□□□□ 0.27
TNFSF13-201ENST00000338784 APOBEC3HQ6NTF7 200 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms