RNA–Protein interactions for RNA: ENST00000338469.3

TREM2-201, Transcript of triggering receptor expressed on myeloid cells 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM2, Length 860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2-201ENST00000338469 ABCB11O95342 1321 aa13.43□□□□□ -0.26
TREM2-201ENST00000338469 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.43□□□□□ -0.26
TREM2-201ENST00000338469 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.43□□□□□ -0.26
TREM2-201ENST00000338469 KLRF2D3W0D1 207 aa13.43□□□□□ -0.26
TREM2-201ENST00000338469 RGS20O76081 388 aa13.43□□□□□ -0.26
TREM2-201ENST00000338469 DNAJB2P25686 324 aa13.43□□□□□ -0.26
TREM2-201ENST00000338469 PPIGQ13427 754 aaKnown RBP eCLIP13.43□□□□□ -0.26
TREM2-201ENST00000338469 WTAPQ15007 396 aa13.43□□□□□ -0.26
TREM2-201ENST00000338469 NBPF20Q3BBV1 942 aa13.43□□□□□ -0.26
TREM2-201ENST00000338469 TMEM67Q5HYA8 995 aa13.43□□□□□ -0.26
TREM2-201ENST00000338469 IFIT1BQ5T764 474 aaKnown RBP13.43□□□□□ -0.26
TREM2-201ENST00000338469 SEPT14Q6ZU15 432 aa13.43□□□□□ -0.26
TREM2-201ENST00000338469 Q6ZUG5 572 aa13.43□□□□□ -0.26
TREM2-201ENST00000338469 FBXO11Q86XK2 927 aa13.43□□□□□ -0.26
TREM2-201ENST00000338469 ZFP91Q96JP5 570 aaPredicted RBP13.43□□□□□ -0.26
TREM2-201ENST00000338469 LRRC2Q9BYS8 371 aa13.43□□□□□ -0.26
TREM2-201ENST00000338469 PBX4Q9BYU1 374 aa13.43□□□□□ -0.26
TREM2-201ENST00000338469 IL23AQ9NPF7 189 aa13.43□□□□□ -0.26
TREM2-201ENST00000338469 SCN5AQ14524 2016 aa13.42□□□□□ -0.26
TREM2-201ENST00000338469 SH2B2O14492 632 aaPredicted RBP13.42□□□□□ -0.26
TREM2-201ENST00000338469 TLR3O15455 904 aaKnown RBP13.42□□□□□ -0.26
TREM2-201ENST00000338469 ZEB2O60315 1214 aa13.42□□□□□ -0.26
TREM2-201ENST00000338469 TXNP10599 105 aaKnown RBP13.42□□□□□ -0.26
TREM2-201ENST00000338469 ARHGAP1Q07960 439 aa13.42□□□□□ -0.26
TREM2-201ENST00000338469 OTOP2Q7RTS6 562 aa13.42□□□□□ -0.26
TREM2-201ENST00000338469 TMEM199Q8N511 208 aa13.42□□□□□ -0.26
TREM2-201ENST00000338469 IL27Q8NEV9 243 aa13.42□□□□□ -0.26
TREM2-201ENST00000338469 IL31RAQ8NI17 732 aa13.42□□□□□ -0.26
TREM2-201ENST00000338469 IGDCC4Q8TDY8 1250 aa13.42□□□□□ -0.26
TREM2-201ENST00000338469 SCFD2Q8WU76 684 aa13.42□□□□□ -0.26
TREM2-201ENST00000338469 AFG1LQ8WV93 481 aa13.42□□□□□ -0.26
TREM2-201ENST00000338469 HERVK_113Q902F9 699 aa13.42□□□□□ -0.26
TREM2-201ENST00000338469 KAT2BQ92831 832 aa13.42□□□□□ -0.26
TREM2-201ENST00000338469 RMDN3Q96TC7 470 aa13.42□□□□□ -0.26
TREM2-201ENST00000338469 BCAS3Q9H6U6 928 aa13.42□□□□□ -0.26
TREM2-201ENST00000338469 ST18O60284 1047 aa13.41□□□□□ -0.26
TREM2-201ENST00000338469 EIF2AK2P19525 551 aaKnown RBP13.41□□□□□ -0.26
TREM2-201ENST00000338469 HSD17B4P51659 736 aa13.41□□□□□ -0.26
TREM2-201ENST00000338469 GHRHRQ02643 423 aa13.41□□□□□ -0.26
TREM2-201ENST00000338469 TROAPQ12815 778 aa13.41□□□□□ -0.26
TREM2-201ENST00000338469 GRM4Q14833 912 aa13.41□□□□□ -0.26
TREM2-201ENST00000338469 PPP2R5BQ15173 497 aa13.41□□□□□ -0.26
TREM2-201ENST00000338469 TMTC2Q8N394 836 aa13.41□□□□□ -0.26
TREM2-201ENST00000338469 USP38Q8NB14 1042 aa13.41□□□□□ -0.26
TREM2-201ENST00000338469 GPKOWQ92917 476 aaPredicted RBP eCLIP13.41□□□□□ -0.26
TREM2-201ENST00000338469 PIGSQ96S52 555 aa13.41□□□□□ -0.26
TREM2-201ENST00000338469 MTG1Q9BT17 334 aaPredicted RBP13.41□□□□□ -0.26
TREM2-201ENST00000338469 RIOX1Q9H6W3 641 aa13.41□□□□□ -0.26
TREM2-201ENST00000338469 LY9Q9HBG7 655 aa13.41□□□□□ -0.26
TREM2-201ENST00000338469 POLR3EQ9NVU0 708 aa13.41□□□□□ -0.26
TREM2-201ENST00000338469 DDX41Q9UJV9 622 aaKnown RBP13.41□□□□□ -0.26
TREM2-201ENST00000338469 PNMA2Q9UL42 364 aa13.41□□□□□ -0.26
TREM2-201ENST00000338469 YBX2Q9Y2T7 364 aaKnown RBP13.41□□□□□ -0.26
TREM2-201ENST00000338469 MYO9BQ13459 2157 aa13.41□□□□□ -0.26
TREM2-201ENST00000338469 KIAA1217Q5T5P2 1943 aa13.41□□□□□ -0.26
TREM2-201ENST00000338469 TET1Q8NFU7 2136 aa13.4□□□□□ -0.26
TREM2-201ENST00000338469 CCDC69A6NI79 296 aa13.4□□□□□ -0.26
TREM2-201ENST00000338469 DHX16O60231 1041 aaKnown RBP13.4□□□□□ -0.26
TREM2-201ENST00000338469 CFBP00751 764 aa13.4□□□□□ -0.26
TREM2-201ENST00000338469 NR3C2P08235 984 aa13.4□□□□□ -0.26
TREM2-201ENST00000338469 MYOGP15173 224 aa13.4□□□□□ -0.26
TREM2-201ENST00000338469 HOXA13P31271 388 aaPredicted RBP13.4□□□□□ -0.26
TREM2-201ENST00000338469 LIFRP42702 1097 aa13.4□□□□□ -0.26
TREM2-201ENST00000338469 CPT1AP50416 773 aa13.4□□□□□ -0.26
TREM2-201ENST00000338469 RABGGTBP53611 331 aa13.4□□□□□ -0.26
TREM2-201ENST00000338469 AK2P54819 239 aa13.4□□□□□ -0.26
TREM2-201ENST00000338469 TOB2Q14106 344 aaPredicted RBP13.4□□□□□ -0.26
TREM2-201ENST00000338469 TTLL4Q14679 1199 aa13.4□□□□□ -0.26
TREM2-201ENST00000338469 GPNMBQ14956 572 aa13.4□□□□□ -0.26
TREM2-201ENST00000338469 ANKRD1Q15327 319 aa13.4□□□□□ -0.26
TREM2-201ENST00000338469 NFXL1Q6ZNB6 911 aa13.4□□□□□ -0.26
TREM2-201ENST00000338469 FBXL16Q8N461 479 aa13.4□□□□□ -0.26
TREM2-201ENST00000338469 NSUN6Q8TEA1 469 aaKnown RBP13.4□□□□□ -0.26
TREM2-201ENST00000338469 BRF1Q92994 677 aa13.4□□□□□ -0.26
TREM2-201ENST00000338469 AGXT2Q9BYV1 514 aa13.4□□□□□ -0.26
TREM2-201ENST00000338469 ZNF576Q9H609 170 aa13.4□□□□□ -0.26
TREM2-201ENST00000338469 PXMP2Q9NR77 195 aa13.4□□□□□ -0.26
TREM2-201ENST00000338469 MRPL11Q9Y3B7 192 aaKnown RBP13.4□□□□□ -0.26
TREM2-201ENST00000338469 GBF1Q92538 1859 aa13.4□□□□□ -0.26
TREM2-201ENST00000338469 ZBTB5O15062 677 aa13.39□□□□□ -0.27
TREM2-201ENST00000338469 NKRFO15226 690 aaKnown RBP eCLIP13.39□□□□□ -0.27
TREM2-201ENST00000338469 SORBS3O60504 671 aa13.39□□□□□ -0.27
TREM2-201ENST00000338469 FGBP02675 491 aa13.39□□□□□ -0.27
TREM2-201ENST00000338469 MMP3P08254 477 aa13.39□□□□□ -0.27
TREM2-201ENST00000338469 SP2Q02086 613 aa13.39□□□□□ -0.27
TREM2-201ENST00000338469 APOBRQ0VD83 1088 aa13.39□□□□□ -0.27
TREM2-201ENST00000338469 ADGRE1Q14246 886 aa13.39□□□□□ -0.27
TREM2-201ENST00000338469 HIC1Q14526 733 aa13.39□□□□□ -0.27
TREM2-201ENST00000338469 PSRC1Q6PGN9 363 aaPredicted RBP13.39□□□□□ -0.27
TREM2-201ENST00000338469 SGMS1Q86VZ5 419 aa13.39□□□□□ -0.27
TREM2-201ENST00000338469 HOMER1Q86YM7 354 aa13.39□□□□□ -0.27
TREM2-201ENST00000338469 MAFAQ8NHW3 353 aaPredicted RBP13.39□□□□□ -0.27
TREM2-201ENST00000338469 TIFAQ96CG3 184 aa13.39□□□□□ -0.27
TREM2-201ENST00000338469 PDCD2LQ9BRP1 358 aa13.39□□□□□ -0.27
TREM2-201ENST00000338469 MYL10Q9BUA6 226 aa13.39□□□□□ -0.27
TREM2-201ENST00000338469 AMNQ9BXJ7 453 aa13.39□□□□□ -0.27
TREM2-201ENST00000338469 TELO2Q9Y4R8 837 aa13.39□□□□□ -0.27
TREM2-201ENST00000338469 PCDHA1Q9Y5I3 950 aa13.39□□□□□ -0.27
TREM2-201ENST00000338469 REV3LO60673 3130 aa13.39□□□□□ -0.27
TREM2-201ENST00000338469 TRIP12Q14669 1992 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms