RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 DBNDD1Q9H9R9 158 aa19.7■□□□□ 0.74
LRCH3-201ENST00000334859 HDAC6Q9UBN7 1215 aa19.7■□□□□ 0.74
LRCH3-201ENST00000334859 A0A1W2PQJ5 194 aa19.69■□□□□ 0.74
LRCH3-201ENST00000334859 FGFR1OPO95684 399 aaKnown RBP19.69■□□□□ 0.74
LRCH3-201ENST00000334859 CRKP46108 304 aa19.69■□□□□ 0.74
LRCH3-201ENST00000334859 TUBB4BP68371 445 aa19.69■□□□□ 0.74
LRCH3-201ENST00000334859 LRRC63Q05C16 580 aa19.69■□□□□ 0.74
LRCH3-201ENST00000334859 ECM1Q16610 540 aa19.69■□□□□ 0.74
LRCH3-201ENST00000334859 MSANTD4Q8NCY6 345 aa19.69■□□□□ 0.74
LRCH3-201ENST00000334859 GLIS3Q8NEA6 775 aa19.69■□□□□ 0.74
LRCH3-201ENST00000334859 FUT8Q9BYC5 575 aa19.69■□□□□ 0.74
LRCH3-201ENST00000334859 PCDHA12Q9UN75 941 aa19.69■□□□□ 0.74
LRCH3-201ENST00000334859 GCFC2P16383 781 aaKnown RBP19.69■□□□□ 0.74
LRCH3-201ENST00000334859 CYP27A1Q02318 531 aa19.69■□□□□ 0.74
LRCH3-201ENST00000334859 MAN2A1Q16706 1144 aa19.69■□□□□ 0.74
LRCH3-201ENST00000334859 FIGNQ5HY92 759 aa19.69■□□□□ 0.74
LRCH3-201ENST00000334859 TSG101Q99816 390 aa19.69■□□□□ 0.74
LRCH3-201ENST00000334859 EIF3CLB5ME19 914 aaKnown RBP19.68■□□□□ 0.74
LRCH3-201ENST00000334859 USP17L15C9J2P7 530 aa19.68■□□□□ 0.74
LRCH3-201ENST00000334859 USP17L13C9JLJ4 530 aa19.68■□□□□ 0.74
LRCH3-201ENST00000334859 USP17L11C9JVI0 530 aa19.68■□□□□ 0.74
LRCH3-201ENST00000334859 USP17L18D6R9N7 530 aa19.68■□□□□ 0.74
LRCH3-201ENST00000334859 USP17L22D6RA61 530 aa19.68■□□□□ 0.74
LRCH3-201ENST00000334859 USP17L17D6RBQ6 530 aa19.68■□□□□ 0.74
LRCH3-201ENST00000334859 USP17L19D6RCP7 530 aa19.68■□□□□ 0.74
LRCH3-201ENST00000334859 USP17L20D6RJB6 530 aa19.68■□□□□ 0.74
LRCH3-201ENST00000334859 ATP1A1P05023 1023 aaKnown RBP19.68■□□□□ 0.74
LRCH3-201ENST00000334859 USP17L24Q0WX57 530 aa19.68■□□□□ 0.74
LRCH3-201ENST00000334859 USP17L6PQ6QN14 398 aa19.68■□□□□ 0.74
LRCH3-201ENST00000334859 TRAPPC11Q7Z392 1133 aa19.68■□□□□ 0.74
LRCH3-201ENST00000334859 KIAA0825Q8IV33 1275 aa19.68■□□□□ 0.74
LRCH3-201ENST00000334859 NOA1Q8NC60 698 aaKnown RBP19.68■□□□□ 0.74
LRCH3-201ENST00000334859 CCDC42Q96M95 316 aa19.68■□□□□ 0.74
LRCH3-201ENST00000334859 EIF3CQ99613 913 aaKnown RBP19.68■□□□□ 0.74
LRCH3-201ENST00000334859 LACRTQ9GZZ8 138 aa19.68■□□□□ 0.74
LRCH3-201ENST00000334859 DNAJC18Q9H819 358 aa19.68■□□□□ 0.74
LRCH3-201ENST00000334859 MMRN2Q9H8L6 949 aa19.68■□□□□ 0.74
LRCH3-201ENST00000334859 GREB1LQ9C091 1923 aaPredicted RBP19.68■□□□□ 0.74
LRCH3-201ENST00000334859 RCCD1A6NED2 376 aa19.68■□□□□ 0.74
LRCH3-201ENST00000334859 ERLIN1O75477 346 aa19.68■□□□□ 0.74
LRCH3-201ENST00000334859 OAS2P29728 719 aaKnown RBP19.68■□□□□ 0.74
LRCH3-201ENST00000334859 ALDH1B1P30837 517 aa19.68■□□□□ 0.74
LRCH3-201ENST00000334859 SLC1A4P43007 532 aa19.68■□□□□ 0.74
LRCH3-201ENST00000334859 RBM5P52756 815 aaKnown RBP eCLIP19.68■□□□□ 0.74
LRCH3-201ENST00000334859 SMC1AQ14683 1233 aaKnown RBP19.68■□□□□ 0.74
LRCH3-201ENST00000334859 SHROOM1Q2M3G4 852 aaPredicted RBP19.68■□□□□ 0.74
LRCH3-201ENST00000334859 KRT27Q7Z3Y8 459 aa19.68■□□□□ 0.74
LRCH3-201ENST00000334859 CCDC17Q96LX7 622 aa19.68■□□□□ 0.74
LRCH3-201ENST00000334859 QTRT2Q9H974 415 aaKnown RBP19.68■□□□□ 0.74
LRCH3-201ENST00000334859 MACROD2A1Z1Q3 448 aa19.67■□□□□ 0.74
LRCH3-201ENST00000334859 COASYQ13057 564 aa19.67■□□□□ 0.74
LRCH3-201ENST00000334859 SPA17Q15506 151 aa19.67■□□□□ 0.74
LRCH3-201ENST00000334859 QRICH1Q2TAL8 776 aa19.67■□□□□ 0.74
LRCH3-201ENST00000334859 C2CD5Q86YS7 1000 aa19.67■□□□□ 0.74
LRCH3-201ENST00000334859 MYOCDQ8IZQ8 938 aa19.67■□□□□ 0.74
LRCH3-201ENST00000334859 PROM2Q8N271 834 aa19.67■□□□□ 0.74
LRCH3-201ENST00000334859 IQCDQ96DY2 449 aa19.67■□□□□ 0.74
LRCH3-201ENST00000334859 EHD4Q9H223 541 aa19.67■□□□□ 0.74
LRCH3-201ENST00000334859 KCNQ5Q9NR82 932 aa19.67■□□□□ 0.74
LRCH3-201ENST00000334859 RAB21Q9UL25 225 aa19.67■□□□□ 0.74
LRCH3-201ENST00000334859 SIK3Q9Y2K2 1263 aa19.67■□□□□ 0.74
LRCH3-201ENST00000334859 PCDHA1Q9Y5I3 950 aa19.67■□□□□ 0.74
LRCH3-201ENST00000334859 KDM3AQ9Y4C1 1321 aa19.67■□□□□ 0.74
LRCH3-201ENST00000334859 GOLGB1Q14789 3259 aaKnown RBP19.67■□□□□ 0.74
LRCH3-201ENST00000334859 EPHB6O15197 1021 aa19.67■□□□□ 0.74
LRCH3-201ENST00000334859 PLEKP08567 350 aaPredicted RBP19.67■□□□□ 0.74
LRCH3-201ENST00000334859 EEF2P13639 858 aaKnown RBP19.67■□□□□ 0.74
LRCH3-201ENST00000334859 PSMD2Q13200 908 aa19.67■□□□□ 0.74
LRCH3-201ENST00000334859 LRRC55Q6ZSA7 311 aa19.67■□□□□ 0.74
LRCH3-201ENST00000334859 GPIHBP1Q8IV16 184 aa19.67■□□□□ 0.74
LRCH3-201ENST00000334859 NLGN1Q8N2Q7 840 aa19.67■□□□□ 0.74
LRCH3-201ENST00000334859 MTMR8Q96EF0 704 aa19.67■□□□□ 0.74
LRCH3-201ENST00000334859 TRIM34Q9BYJ4 488 aa19.67■□□□□ 0.74
LRCH3-201ENST00000334859 TANGO6Q9C0B7 1094 aa19.67■□□□□ 0.74
LRCH3-201ENST00000334859 PCDHAC2Q9Y5I4 1007 aa19.67■□□□□ 0.74
LRCH3-201ENST00000334859 SAR1BQ9Y6B6 198 aa19.67■□□□□ 0.74
LRCH3-201ENST00000334859 NRXN2Q9P2S2 1712 aa19.66■□□□□ 0.74
LRCH3-201ENST00000334859 ARFGEF1Q9Y6D6 1849 aa19.66■□□□□ 0.74
LRCH3-201ENST00000334859 EHHADHQ08426 723 aa19.66■□□□□ 0.74
LRCH3-201ENST00000334859 CCDC84Q86UT8 332 aaPredicted RBP19.66■□□□□ 0.74
LRCH3-201ENST00000334859 BMP2KQ9NSY1 1161 aaPredicted RBP19.66■□□□□ 0.74
LRCH3-201ENST00000334859 PANK4Q9NVE7 773 aa19.66■□□□□ 0.74
LRCH3-201ENST00000334859 RNF216Q9NWF9 866 aaPredicted RBP19.66■□□□□ 0.74
LRCH3-201ENST00000334859 DUSP10Q9Y6W6 482 aa19.66■□□□□ 0.74
LRCH3-201ENST00000334859 COL11A2P13942 1736 aaPredicted RBP19.66■□□□□ 0.74
LRCH3-201ENST00000334859 ABCB11O95342 1321 aa19.66■□□□□ 0.74
LRCH3-201ENST00000334859 SRGAP2O75044 1071 aa19.65■□□□□ 0.74
LRCH3-201ENST00000334859 PDE6BP35913 854 aa19.65■□□□□ 0.74
LRCH3-201ENST00000334859 VSNL1P62760 191 aa19.65■□□□□ 0.74
LRCH3-201ENST00000334859 CDK17Q00537 523 aa19.65■□□□□ 0.74
LRCH3-201ENST00000334859 KIF5AQ12840 1032 aa19.65■□□□□ 0.74
LRCH3-201ENST00000334859 CDC37Q16543 378 aaPredicted RBP19.65■□□□□ 0.74
LRCH3-201ENST00000334859 CERKLQ49MI3 558 aaPredicted RBP19.65■□□□□ 0.74
LRCH3-201ENST00000334859 FAM26FQ5R3K3 315 aa19.65■□□□□ 0.74
LRCH3-201ENST00000334859 ZNF662Q6ZS27 426 aa19.65■□□□□ 0.74
LRCH3-201ENST00000334859 KRT26Q7Z3Y9 468 aa19.65■□□□□ 0.74
LRCH3-201ENST00000334859 HNRNPLLQ8WVV9 542 aaKnown RBP19.65■□□□□ 0.74
LRCH3-201ENST00000334859 DNAJC19Q96DA6 116 aa19.65■□□□□ 0.74
LRCH3-201ENST00000334859 CAPZA3Q96KX2 299 aa19.65■□□□□ 0.74
LRCH3-201ENST00000334859 NT5C3AQ9H0P0 336 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms