RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 FSBPO95073 299 aa15.17■□□□□ 0.02
SYNE3-201ENST00000334258 FCER1AP12319 257 aa15.17■□□□□ 0.02
SYNE3-201ENST00000334258 CALML3P27482 149 aa15.17■□□□□ 0.02
SYNE3-201ENST00000334258 CCDC121Q6ZUS5 278 aa15.17■□□□□ 0.02
SYNE3-201ENST00000334258 RUBCNQ92622 972 aa15.17■□□□□ 0.02
SYNE3-201ENST00000334258 AHDC1Q5TGY3 1603 aaPredicted RBP15.17■□□□□ 0.02
SYNE3-201ENST00000334258 CHUKO15111 745 aa15.17■□□□□ 0.02
SYNE3-201ENST00000334258 FGFR2P21802 821 aa15.17■□□□□ 0.02
SYNE3-201ENST00000334258 GYG1P46976 350 aa15.17■□□□□ 0.02
SYNE3-201ENST00000334258 FNTAP49354 379 aa15.17■□□□□ 0.02
SYNE3-201ENST00000334258 GFPT1Q06210 699 aaPredicted RBP15.17■□□□□ 0.02
SYNE3-201ENST00000334258 ACTN3Q08043 901 aaPredicted RBP15.17■□□□□ 0.02
SYNE3-201ENST00000334258 PTGISQ16647 500 aa15.17■□□□□ 0.02
SYNE3-201ENST00000334258 KDM7AQ6ZMT4 941 aa15.17■□□□□ 0.02
SYNE3-201ENST00000334258 TMC4Q7Z404 712 aa15.17■□□□□ 0.02
SYNE3-201ENST00000334258 ADGRA1Q86SQ6 560 aa15.17■□□□□ 0.02
SYNE3-201ENST00000334258 KLC4Q9NSK0 619 aa15.17■□□□□ 0.02
SYNE3-201ENST00000334258 TCP11L1Q9NUJ3 509 aa15.17■□□□□ 0.02
SYNE3-201ENST00000334258 DOT1LQ8TEK3 1739 aa15.17■□□□□ 0.02
SYNE3-201ENST00000334258 CNTNAP5Q8WYK1 1306 aa15.16■□□□□ 0.02
SYNE3-201ENST00000334258 EPHB6O15197 1021 aa15.16■□□□□ 0.02
SYNE3-201ENST00000334258 NKRFO15226 690 aaKnown RBP eCLIP15.16■□□□□ 0.02
SYNE3-201ENST00000334258 KLRC4O43908 158 aa15.16■□□□□ 0.02
SYNE3-201ENST00000334258 INF2Q27J81 1249 aa15.16■□□□□ 0.02
SYNE3-201ENST00000334258 FAM196AQ6ZSG2 479 aa15.16■□□□□ 0.02
SYNE3-201ENST00000334258 KLHL7Q8IXQ5 586 aa15.16■□□□□ 0.02
SYNE3-201ENST00000334258 CELF1Q92879 486 aaKnown RBP15.16■□□□□ 0.02
SYNE3-201ENST00000334258 GPR101Q96P66 508 aaPredicted RBP15.16■□□□□ 0.02
SYNE3-201ENST00000334258 TMEM60Q9H2L4 133 aa15.16■□□□□ 0.02
SYNE3-201ENST00000334258 MYO5AQ9Y4I1 1855 aaKnown RBP15.16■□□□□ 0.02
SYNE3-201ENST00000334258 LRRC53A6NM62 1247 aa15.16■□□□□ 0.02
SYNE3-201ENST00000334258 FTCDO95954 541 aa15.16■□□□□ 0.02
SYNE3-201ENST00000334258 NF2P35240 595 aa15.16■□□□□ 0.02
SYNE3-201ENST00000334258 MDH1P40925 334 aaKnown RBP15.16■□□□□ 0.02
SYNE3-201ENST00000334258 DYNLL1P63167 89 aaKnown RBP15.16■□□□□ 0.02
SYNE3-201ENST00000334258 IQCKQ8N0W5 287 aa15.16■□□□□ 0.02
SYNE3-201ENST00000334258 MYCBPAPQ8TBZ2 947 aa15.16■□□□□ 0.02
SYNE3-201ENST00000334258 TLR10Q9BXR5 811 aa15.16■□□□□ 0.02
SYNE3-201ENST00000334258 SLC39A2Q9NP94 309 aa15.16■□□□□ 0.02
SYNE3-201ENST00000334258 ECM29Q5VYK3 1845 aa15.16■□□□□ 0.02
SYNE3-201ENST00000334258 USP17L12C9JPN9 530 aa15.16■□□□□ 0.02
SYNE3-201ENST00000334258 USP17L21D6R901 530 aa15.16■□□□□ 0.02
SYNE3-201ENST00000334258 DDAH1O94760 285 aa15.16■□□□□ 0.02
SYNE3-201ENST00000334258 SCP2P22307 547 aa15.16■□□□□ 0.02
SYNE3-201ENST00000334258 SALL4Q9UJQ4 1053 aa15.16■□□□□ 0.02
SYNE3-201ENST00000334258 LRP6O75581 1613 aa15.15■□□□□ 0.02
SYNE3-201ENST00000334258 PLCG1P19174 1290 aa15.15■□□□□ 0.02
SYNE3-201ENST00000334258 KLRK1P26718 216 aa15.15■□□□□ 0.02
SYNE3-201ENST00000334258 CDK17Q00537 523 aa15.15■□□□□ 0.02
SYNE3-201ENST00000334258 GLE1Q53GS7 698 aaKnown RBP15.15■□□□□ 0.02
SYNE3-201ENST00000334258 MIIPQ5JXC2 388 aa15.15■□□□□ 0.02
SYNE3-201ENST00000334258 NBPF5PQ86XG9 351 aaPredicted RBP15.15■□□□□ 0.02
SYNE3-201ENST00000334258 CCDC13Q8IYE1 715 aa15.15■□□□□ 0.02
SYNE3-201ENST00000334258 MTMR8Q96EF0 704 aa15.15■□□□□ 0.02
SYNE3-201ENST00000334258 ATP6V1G3Q96LB4 118 aa15.15■□□□□ 0.02
SYNE3-201ENST00000334258 ERGIC2Q96RQ1 377 aa15.15■□□□□ 0.02
SYNE3-201ENST00000334258 NDST4Q9H3R1 872 aa15.15■□□□□ 0.02
SYNE3-201ENST00000334258 NLRC4Q9NPP4 1024 aa15.15■□□□□ 0.02
SYNE3-201ENST00000334258 LRRC4BQ9NT99 713 aa15.15■□□□□ 0.02
SYNE3-201ENST00000334258 SLIT2O94813 1529 aa15.15■□□□□ 0.02
SYNE3-201ENST00000334258 PLCH1Q4KWH8 1693 aa15.15■□□□□ 0.02
SYNE3-201ENST00000334258 SLC1A4P43007 532 aa15.15■□□□□ 0.02
SYNE3-201ENST00000334258 PFKFB3Q16875 520 aaPredicted RBP15.15■□□□□ 0.02
SYNE3-201ENST00000334258 ARHGEF1Q92888 912 aaKnown RBP15.15■□□□□ 0.02
SYNE3-201ENST00000334258 SCLT1Q96NL6 688 aa15.15■□□□□ 0.02
SYNE3-201ENST00000334258 TFCP2L1Q9NZI6 479 aa15.15■□□□□ 0.02
SYNE3-201ENST00000334258 MYH7P12883 1935 aa15.15■□□□□ 0.02
SYNE3-201ENST00000334258 ERVV-1B6SEH8 477 aa15.14■□□□□ 0.01
SYNE3-201ENST00000334258 NTSR2O95665 410 aa15.14■□□□□ 0.01
SYNE3-201ENST00000334258 ARID5AQ03989 594 aa15.14■□□□□ 0.01
SYNE3-201ENST00000334258 NEDD9Q14511 834 aa15.14■□□□□ 0.01
SYNE3-201ENST00000334258 TRADDQ15628 312 aa15.14■□□□□ 0.01
SYNE3-201ENST00000334258 CABP7Q86V35 215 aa15.14■□□□□ 0.01
SYNE3-201ENST00000334258 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.14■□□□□ 0.01
SYNE3-201ENST00000334258 KBTBD4Q9NVX7 518 aa15.14■□□□□ 0.01
SYNE3-201ENST00000334258 PACSIN2Q9UNF0 486 aaPredicted RBP15.14■□□□□ 0.01
SYNE3-201ENST00000334258 PLAAQ9Y263 795 aa15.14■□□□□ 0.01
SYNE3-201ENST00000334258 AKAP11Q9UKA4 1901 aa15.14■□□□□ 0.01
SYNE3-201ENST00000334258 UBR2Q8IWV8 1755 aa15.14■□□□□ 0.01
SYNE3-201ENST00000334258 FAM205AQ6ZU69 1335 aa15.14■□□□□ 0.01
SYNE3-201ENST00000334258 DDX60Q8IY21 1712 aaKnown RBP15.14■□□□□ 0.01
SYNE3-201ENST00000334258 A0A1W2PQJ5 194 aa15.14■□□□□ 0.01
SYNE3-201ENST00000334258 TSPY2A6NKD2 308 aa15.14■□□□□ 0.01
SYNE3-201ENST00000334258 EHHADHQ08426 723 aa15.14■□□□□ 0.01
SYNE3-201ENST00000334258 ZKSCAN4Q969J2 545 aaPredicted RBP15.14■□□□□ 0.01
SYNE3-201ENST00000334258 MYH10P35580 1976 aa15.14■□□□□ 0.01
SYNE3-201ENST00000334258 BACH1O14867 736 aa15.14■□□□□ 0.01
SYNE3-201ENST00000334258 CHRNDQ07001 517 aa15.14■□□□□ 0.01
SYNE3-201ENST00000334258 VWA3BQ502W6 1294 aa15.14■□□□□ 0.01
SYNE3-201ENST00000334258 CCDC84Q86UT8 332 aaPredicted RBP15.14■□□□□ 0.01
SYNE3-201ENST00000334258 ARFGAP2Q8N6H7 521 aa15.14■□□□□ 0.01
SYNE3-201ENST00000334258 C4orf32Q8N8J7 132 aa15.14■□□□□ 0.01
SYNE3-201ENST00000334258 TJP1Q07157 1748 aa15.13■□□□□ 0.01
SYNE3-201ENST00000334258 FAM107AO95990 144 aa15.13■□□□□ 0.01
SYNE3-201ENST00000334258 MYL1P05976 194 aa15.13■□□□□ 0.01
SYNE3-201ENST00000334258 KIF5BP33176 963 aa15.13■□□□□ 0.01
SYNE3-201ENST00000334258 IGHMBP2P38935 993 aaKnown RBP15.13■□□□□ 0.01
SYNE3-201ENST00000334258 FIGNQ5HY92 759 aa15.13■□□□□ 0.01
SYNE3-201ENST00000334258 KLHDC7AQ5VTJ3 777 aa15.13■□□□□ 0.01
SYNE3-201ENST00000334258 ZNF572Q7Z3I7 529 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms