RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 NLRP12P59046 1061 aa13.11□□□□□ -0.31
HDAC6-201ENST00000334136 NCAPH2Q6IBW4 605 aa13.11□□□□□ -0.31
HDAC6-201ENST00000334136 GPIHBP1Q8IV16 184 aa13.11□□□□□ -0.31
HDAC6-201ENST00000334136 GMLQ99445 158 aa13.11□□□□□ -0.31
HDAC6-201ENST00000334136 FBXO28Q9NVF7 368 aa13.11□□□□□ -0.31
HDAC6-201ENST00000334136 LRWD1Q9UFC0 647 aa13.11□□□□□ -0.31
HDAC6-201ENST00000334136 GAS7O60861 476 aa13.1□□□□□ -0.31
HDAC6-201ENST00000334136 NDUFA8P51970 172 aa13.1□□□□□ -0.31
HDAC6-201ENST00000334136 DPCR1Q3MIW9 517 aa13.1□□□□□ -0.31
HDAC6-201ENST00000334136 NBPF11Q86T75 865 aa13.1□□□□□ -0.31
HDAC6-201ENST00000334136 CTAGE1Q96RT6 745 aa13.1□□□□□ -0.31
HDAC6-201ENST00000334136 RTEL1Q9NZ71 1219 aa13.1□□□□□ -0.31
HDAC6-201ENST00000334136 PCDHA7Q9UN72 937 aa13.1□□□□□ -0.31
HDAC6-201ENST00000334136 SBF2Q86WG5 1849 aa13.1□□□□□ -0.31
HDAC6-201ENST00000334136 TRAF5O00463 557 aa13.1□□□□□ -0.31
HDAC6-201ENST00000334136 TEX13BQ9BXU2 312 aa13.1□□□□□ -0.31
HDAC6-201ENST00000334136 EIF2AK2P19525 551 aaKnown RBP13.1□□□□□ -0.31
HDAC6-201ENST00000334136 IFFO1Q0D2I5 559 aa13.1□□□□□ -0.31
HDAC6-201ENST00000334136 MOB2Q70IA6 237 aa13.1□□□□□ -0.31
HDAC6-201ENST00000334136 TBCKQ8TEA7 893 aa13.1□□□□□ -0.31
HDAC6-201ENST00000334136 MLXIPQ9HAP2 919 aa13.1□□□□□ -0.31
HDAC6-201ENST00000334136 STK36Q9NRP7 1315 aa13.1□□□□□ -0.31
HDAC6-201ENST00000334136 NUP188Q5SRE5 1749 aa13.1□□□□□ -0.31
HDAC6-201ENST00000334136 BAZ2BQ9UIF8 2168 aaKnown RBP13.1□□□□□ -0.31
HDAC6-201ENST00000334136 TBCAO75347 108 aaKnown RBP13.1□□□□□ -0.31
HDAC6-201ENST00000334136 EGFRP00533 1210 aa13.1□□□□□ -0.31
HDAC6-201ENST00000334136 UBXN1Q04323 297 aa13.1□□□□□ -0.31
HDAC6-201ENST00000334136 PARK7Q99497 189 aaKnown RBP13.1□□□□□ -0.31
HDAC6-201ENST00000334136 SGIP1Q9BQI5 828 aa13.1□□□□□ -0.31
HDAC6-201ENST00000334136 SH3GLB2Q9NR46 395 aa13.1□□□□□ -0.31
HDAC6-201ENST00000334136 ABCB11O95342 1321 aa13.09□□□□□ -0.31
HDAC6-201ENST00000334136 TBC1D12O60347 775 aa13.09□□□□□ -0.31
HDAC6-201ENST00000334136 SREBF2Q12772 1141 aa13.09□□□□□ -0.31
HDAC6-201ENST00000334136 VGLL4Q14135 290 aa13.09□□□□□ -0.31
HDAC6-201ENST00000334136 SEC23AQ15436 765 aa13.09□□□□□ -0.31
HDAC6-201ENST00000334136 ADALQ6DHV7 355 aa13.09□□□□□ -0.31
HDAC6-201ENST00000334136 USP17L6PQ6QN14 398 aa13.09□□□□□ -0.31
HDAC6-201ENST00000334136 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.09□□□□□ -0.31
HDAC6-201ENST00000334136 SPC25Q9HBM1 224 aa13.09□□□□□ -0.31
HDAC6-201ENST00000334136 TMCO5BA8MYB1 307 aa13.09□□□□□ -0.31
HDAC6-201ENST00000334136 CXCL11O14625 94 aa13.09□□□□□ -0.31
HDAC6-201ENST00000334136 KIF23Q02241 960 aaPredicted RBP13.09□□□□□ -0.31
HDAC6-201ENST00000334136 HAUS3Q68CZ6 603 aa13.09□□□□□ -0.31
HDAC6-201ENST00000334136 IQUBQ8NA54 791 aa13.09□□□□□ -0.31
HDAC6-201ENST00000334136 ATG4CQ96DT6 458 aa13.09□□□□□ -0.31
HDAC6-201ENST00000334136 MAP3K14Q99558 947 aa13.09□□□□□ -0.31
HDAC6-201ENST00000334136 ACAD9Q9H845 621 aa13.09□□□□□ -0.31
HDAC6-201ENST00000334136 IL17RBQ9NRM6 502 aa13.09□□□□□ -0.31
HDAC6-201ENST00000334136 FANCLQ9NW38 375 aa13.09□□□□□ -0.31
HDAC6-201ENST00000334136 DDX25Q9UHL0 483 aaKnown RBP13.09□□□□□ -0.31
HDAC6-201ENST00000334136 PCDHA12Q9UN75 941 aa13.09□□□□□ -0.31
HDAC6-201ENST00000334136 PFKFB1P16118 471 aa13.09□□□□□ -0.31
HDAC6-201ENST00000334136 EEPD1Q7L9B9 569 aa13.09□□□□□ -0.31
HDAC6-201ENST00000334136 HINFPQ9BQA5 517 aa13.09□□□□□ -0.31
HDAC6-201ENST00000334136 GOLGA6L7A0A1B0GV03 622 aa13.08□□□□□ -0.32
HDAC6-201ENST00000334136 CYLC1P35663 651 aaPredicted RBP13.08□□□□□ -0.32
HDAC6-201ENST00000334136 NOP2P46087 812 aaKnown RBP13.08□□□□□ -0.32
HDAC6-201ENST00000334136 EVX2Q03828 476 aa13.08□□□□□ -0.32
HDAC6-201ENST00000334136 ANKRD36CQ5JPF3 1778 aa13.08□□□□□ -0.32
HDAC6-201ENST00000334136 CCDC122Q5T0U0 273 aa13.08□□□□□ -0.32
HDAC6-201ENST00000334136 FERMT2Q96AC1 680 aa13.08□□□□□ -0.32
HDAC6-201ENST00000334136 ALS2CR12Q96Q35 445 aa13.08□□□□□ -0.32
HDAC6-201ENST00000334136 RMDN3Q96TC7 470 aa13.08□□□□□ -0.32
HDAC6-201ENST00000334136 PITPNM2Q9BZ72 1349 aa13.08□□□□□ -0.32
HDAC6-201ENST00000334136 AZI2Q9H6S1 392 aa13.08□□□□□ -0.32
HDAC6-201ENST00000334136 ZFYVE28Q9HCC9 887 aa13.08□□□□□ -0.32
HDAC6-201ENST00000334136 BARHL2Q9NY43 387 aa13.08□□□□□ -0.32
HDAC6-201ENST00000334136 SCN7AQ01118 1682 aa13.08□□□□□ -0.32
HDAC6-201ENST00000334136 MACROD2A1Z1Q3 448 aa13.08□□□□□ -0.32
HDAC6-201ENST00000334136 SNX29Q8TEQ0 813 aa13.08□□□□□ -0.32
HDAC6-201ENST00000334136 ANO3Q9BYT9 981 aa13.08□□□□□ -0.32
HDAC6-201ENST00000334136 KIAA1683Q9H0B3 1180 aa13.08□□□□□ -0.32
HDAC6-201ENST00000334136 UBR3Q6ZT12 1888 aa13.08□□□□□ -0.32
HDAC6-201ENST00000334136 LY75O60449 1722 aa13.08□□□□□ -0.32
HDAC6-201ENST00000334136 DKC1O60832 514 aaKnown RBP eCLIP13.08□□□□□ -0.323e-10■■■■■ 48.8
HDAC6-201ENST00000334136 CUTAO60888 179 aa13.08□□□□□ -0.32
HDAC6-201ENST00000334136 PTPRAP18433 802 aa13.08□□□□□ -0.32
HDAC6-201ENST00000334136 PPATQ06203 517 aa13.08□□□□□ -0.32
HDAC6-201ENST00000334136 PPP1R13BQ96KQ4 1090 aa13.08□□□□□ -0.32
HDAC6-201ENST00000334136 SPTLC3Q9NUV7 552 aa13.08□□□□□ -0.32
HDAC6-201ENST00000334136 HSF2BPO75031 334 aa13.07□□□□□ -0.32
HDAC6-201ENST00000334136 FCER1AP12319 257 aa13.07□□□□□ -0.32
HDAC6-201ENST00000334136 COPB2P35606 906 aa13.07□□□□□ -0.32
HDAC6-201ENST00000334136 DDIT3P35638 169 aa13.07□□□□□ -0.32
HDAC6-201ENST00000334136 TRAPPC10P48553 1259 aa13.07□□□□□ -0.32
HDAC6-201ENST00000334136 SPAG1Q07617 926 aa13.07□□□□□ -0.32
HDAC6-201ENST00000334136 KIF5AQ12840 1032 aa13.07□□□□□ -0.32
HDAC6-201ENST00000334136 PTGDRQ13258 359 aa13.07□□□□□ -0.32
HDAC6-201ENST00000334136 LUC7L2Q9Y383 392 aaKnown RBP13.07□□□□□ -0.32
HDAC6-201ENST00000334136 KRT86O43790 486 aa13.07□□□□□ -0.32
HDAC6-201ENST00000334136 OR52Z1P0C646 297 aa13.07□□□□□ -0.32
HDAC6-201ENST00000334136 CKAP4Q07065 602 aaKnown RBP13.07□□□□□ -0.32
HDAC6-201ENST00000334136 CCDC144BQ3MJ40 725 aa13.07□□□□□ -0.32
HDAC6-201ENST00000334136 SEPT14Q6ZU15 432 aa13.07□□□□□ -0.32
HDAC6-201ENST00000334136 DYDC1Q8WWB3 177 aa13.07□□□□□ -0.32
HDAC6-201ENST00000334136 PSMB7Q99436 277 aa13.07□□□□□ -0.32
HDAC6-201ENST00000334136 MMRN2Q9H8L6 949 aa13.07□□□□□ -0.32
HDAC6-201ENST00000334136 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.07□□□□□ -0.32
HDAC6-201ENST00000334136 CLIC4Q9Y696 253 aa13.07□□□□□ -0.32
HDAC6-201ENST00000334136 SORBS3O60504 671 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms