RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 BZW1Q7L1Q6 419 aaKnown RBP26.81■■□□□ 1.88
SOX1-201ENST00000330949 THOC1Q96FV9 657 aaKnown RBP26.81■■□□□ 1.88
SOX1-201ENST00000330949 ZKSCAN3Q9BRR0 538 aa26.81■■□□□ 1.88
SOX1-201ENST00000330949 GSTA1P08263 222 aa26.8■■□□□ 1.88
SOX1-201ENST00000330949 MTIF2P46199 727 aaKnown RBP26.8■■□□□ 1.88
SOX1-201ENST00000330949 NOC4LQ9BVI4 516 aaKnown RBP26.8■■□□□ 1.88
SOX1-201ENST00000330949 TRIM37O94972 964 aa26.8■■□□□ 1.88
SOX1-201ENST00000330949 CTNNA1P35221 906 aaKnown RBP26.8■■□□□ 1.88
SOX1-201ENST00000330949 TNNC1P63316 161 aa26.8■■□□□ 1.88
SOX1-201ENST00000330949 RRP12Q5JTH9 1297 aaKnown RBP26.8■■□□□ 1.88
SOX1-201ENST00000330949 IFNL3Q8IZI9 196 aa26.8■■□□□ 1.88
SOX1-201ENST00000330949 DHTKD1Q96HY7 919 aaPredicted RBP26.8■■□□□ 1.88
SOX1-201ENST00000330949 PIH1D3Q9NQM4 214 aaKnown RBP26.8■■□□□ 1.88
SOX1-201ENST00000330949 AKAP11Q9UKA4 1901 aa26.8■■□□□ 1.88
SOX1-201ENST00000330949 TJP1Q07157 1748 aa26.8■■□□□ 1.88
SOX1-201ENST00000330949 H0YGN5 161 aa26.8■■□□□ 1.88
SOX1-201ENST00000330949 HLTFQ14527 1009 aaKnown RBP eCLIP26.8■■□□□ 1.88
SOX1-201ENST00000330949 CNOT6LQ96LI5 555 aaKnown RBP26.8■■□□□ 1.88
SOX1-201ENST00000330949 ISCUQ9H1K1 167 aa26.8■■□□□ 1.88
SOX1-201ENST00000330949 NFS1Q9Y697 457 aa26.8■■□□□ 1.88
SOX1-201ENST00000330949 ORC4O43929 436 aa26.79■■□□□ 1.88
SOX1-201ENST00000330949 PHKA1P46020 1223 aa26.79■■□□□ 1.88
SOX1-201ENST00000330949 ZNF844Q08AG5 666 aa26.79■■□□□ 1.88
SOX1-201ENST00000330949 CAPRIN2Q6IMN6 1127 aaKnown RBP26.79■■□□□ 1.88
SOX1-201ENST00000330949 ZSCAN29Q8IWY8 852 aaPredicted RBP26.79■■□□□ 1.88
SOX1-201ENST00000330949 ANKS4BQ8N8V4 417 aa26.79■■□□□ 1.88
SOX1-201ENST00000330949 CCDC63Q8NA47 563 aa26.79■■□□□ 1.88
SOX1-201ENST00000330949 CCT8L1PA6NM43 557 aa26.79■■□□□ 1.88
SOX1-201ENST00000330949 SALL4Q9UJQ4 1053 aa26.79■■□□□ 1.88
SOX1-201ENST00000330949 BICDL2A1A5D9 508 aa26.78■■□□□ 1.88
SOX1-201ENST00000330949 ANP32DO95626 131 aa26.78■■□□□ 1.88
SOX1-201ENST00000330949 PDE6AP16499 860 aa26.78■■□□□ 1.88
SOX1-201ENST00000330949 CUL1Q13616 776 aa26.78■■□□□ 1.88
SOX1-201ENST00000330949 GIMAP8Q8ND71 665 aaPredicted RBP26.78■■□□□ 1.88
SOX1-201ENST00000330949 MTMR8Q96EF0 704 aa26.78■■□□□ 1.88
SOX1-201ENST00000330949 MYL1P05976 194 aa26.78■■□□□ 1.88
SOX1-201ENST00000330949 PKN1Q16512 942 aa26.78■■□□□ 1.88
SOX1-201ENST00000330949 CCDC197Q8NCU1 140 aa26.78■■□□□ 1.88
SOX1-201ENST00000330949 KCPQ6ZWJ8 1503 aa26.78■■□□□ 1.88
SOX1-201ENST00000330949 DRD4P21917 467 aa26.77■■□□□ 1.88
SOX1-201ENST00000330949 DUSP9Q99956 384 aaKnown RBP26.77■■□□□ 1.88
SOX1-201ENST00000330949 EPB41L4AQ9HCS5 686 aaPredicted RBP26.77■■□□□ 1.88
SOX1-201ENST00000330949 ETAA1Q9NY74 926 aa26.77■■□□□ 1.88
SOX1-201ENST00000330949 TRMT112Q9UI30 125 aaKnown RBP26.77■■□□□ 1.88
SOX1-201ENST00000330949 TIAM2Q8IVF5 1701 aa26.77■■□□□ 1.88
SOX1-201ENST00000330949 CFAP73A6NFT4 308 aa26.77■■□□□ 1.88
SOX1-201ENST00000330949 RHOBTB3O94955 611 aa26.77■■□□□ 1.88
SOX1-201ENST00000330949 LONP1P36776 959 aaKnown RBP26.77■■□□□ 1.88
SOX1-201ENST00000330949 PEX19P40855 299 aa26.77■■□□□ 1.88
SOX1-201ENST00000330949 TRAPPC10P48553 1259 aa26.77■■□□□ 1.88
SOX1-201ENST00000330949 MIIPQ5JXC2 388 aa26.77■■□□□ 1.88
SOX1-201ENST00000330949 PIGBQ92521 554 aa26.77■■□□□ 1.88
SOX1-201ENST00000330949 TNFRSF25Q93038 417 aa26.77■■□□□ 1.88
SOX1-201ENST00000330949 SLC39A2Q9NP94 309 aa26.77■■□□□ 1.88
SOX1-201ENST00000330949 NOP53Q9NZM5 478 aaKnown RBP26.77■■□□□ 1.88
SOX1-201ENST00000330949 MTMR3Q13615 1198 aa26.76■■□□□ 1.87
SOX1-201ENST00000330949 ANKRD13CQ8N6S4 541 aa26.76■■□□□ 1.87
SOX1-201ENST00000330949 ZNF512BQ96KM6 892 aaPredicted RBP26.76■■□□□ 1.87
SOX1-201ENST00000330949 CNOT10Q9H9A5 744 aaKnown RBP26.76■■□□□ 1.87
SOX1-201ENST00000330949 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP26.76■■□□□ 1.87
SOX1-201ENST00000330949 PHF20L1A8MW92 1017 aa26.76■■□□□ 1.87
SOX1-201ENST00000330949 RAD51CO43502 376 aa26.76■■□□□ 1.87
SOX1-201ENST00000330949 RWDD2BP57060 319 aa26.76■■□□□ 1.87
SOX1-201ENST00000330949 RBBP5Q15291 538 aaKnown RBP26.76■■□□□ 1.87
SOX1-201ENST00000330949 TRADDQ15628 312 aa26.76■■□□□ 1.87
SOX1-201ENST00000330949 GRIPAP1Q4V328 841 aa26.76■■□□□ 1.87
SOX1-201ENST00000330949 TCP11Q8WWU5 503 aa26.76■■□□□ 1.87
SOX1-201ENST00000330949 CHMP6Q96FZ7 201 aa26.76■■□□□ 1.87
SOX1-201ENST00000330949 SLC12A4Q9UP95 1085 aa26.76■■□□□ 1.87
SOX1-201ENST00000330949 TACC3Q9Y6A5 838 aa26.76■■□□□ 1.87
SOX1-201ENST00000330949 BACH1O14867 736 aa26.75■■□□□ 1.87
SOX1-201ENST00000330949 BUB1O43683 1085 aa26.75■■□□□ 1.87
SOX1-201ENST00000330949 ZBTB38Q8NAP3 1195 aaPredicted RBP26.75■■□□□ 1.87
SOX1-201ENST00000330949 OR2W6PQ8NHA6 318 aa26.75■■□□□ 1.87
SOX1-201ENST00000330949 TTLL11Q8NHH1 800 aa26.75■■□□□ 1.87
SOX1-201ENST00000330949 EME2A4GXA9 379 aaPredicted RBP26.75■■□□□ 1.87
SOX1-201ENST00000330949 PRPF3O43395 683 aaKnown RBP26.75■■□□□ 1.87
SOX1-201ENST00000330949 MYBP10242 640 aa26.75■■□□□ 1.87
SOX1-201ENST00000330949 ARL6IP4Q66PJ3 421 aaKnown RBP26.75■■□□□ 1.87
SOX1-201ENST00000330949 CNOT8Q9UFF9 292 aaKnown RBP26.75■■□□□ 1.87
SOX1-201ENST00000330949 CLTAP09496 248 aa26.75■■□□□ 1.87
SOX1-201ENST00000330949 RASSF7Q02833 373 aa26.75■■□□□ 1.87
SOX1-201ENST00000330949 UAP1Q16222 522 aaPredicted RBP26.75■■□□□ 1.87
SOX1-201ENST00000330949 P2RX5Q93086 422 aa26.75■■□□□ 1.87
SOX1-201ENST00000330949 DISC1Q9NRI5 854 aa26.75■■□□□ 1.87
SOX1-201ENST00000330949 NOVA2Q9UNW9 492 aaKnown RBP26.75■■□□□ 1.87
SOX1-201ENST00000330949 RTL9Q8NET4 1388 aa26.74■■□□□ 1.87
SOX1-201ENST00000330949 PRDM1O75626 825 aa26.74■■□□□ 1.87
SOX1-201ENST00000330949 CCNE1P24864 410 aa26.74■■□□□ 1.87
SOX1-201ENST00000330949 IL17AQ16552 155 aa26.74■■□□□ 1.87
SOX1-201ENST00000330949 PNMA8AQ86V59 439 aaPredicted RBP26.74■■□□□ 1.87
SOX1-201ENST00000330949 CCDC26Q8TAB7 109 aa26.74■■□□□ 1.87
SOX1-201ENST00000330949 LPIN2Q92539 896 aa26.74■■□□□ 1.87
SOX1-201ENST00000330949 TCRBV5S4A2TA0A5A2 114 aa26.74■■□□□ 1.87
SOX1-201ENST00000330949 IRS4O14654 1257 aaPredicted RBP26.74■■□□□ 1.87
SOX1-201ENST00000330949 SMNDC1O75940 238 aaKnown RBP eCLIP26.74■■□□□ 1.87
SOX1-201ENST00000330949 PCCAP05165 728 aaPredicted RBP26.74■■□□□ 1.87
SOX1-201ENST00000330949 MIS18BP1Q6P0N0 1132 aa26.74■■□□□ 1.87
SOX1-201ENST00000330949 ACSBG1Q96GR2 724 aa26.74■■□□□ 1.87
SOX1-201ENST00000330949 LIN7AO14910 233 aaPredicted RBP26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms