RNA–Protein interactions for RNA: ENST00000330688.8

RARB-201, Transcript of retinoic acid receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARB, Length 3,084 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARB-201ENST00000330688 HDXQ7Z353 690 aa11.17□□□□□ -0.62
RARB-201ENST00000330688 DDX25Q9UHL0 483 aaKnown RBP11.17□□□□□ -0.62
RARB-201ENST00000330688 ATP2B2Q01814 1243 aa11.17□□□□□ -0.62
RARB-201ENST00000330688 DOK7Q18PE1 504 aa11.17□□□□□ -0.62
RARB-201ENST00000330688 CDC42EP5Q6NZY7 148 aa11.17□□□□□ -0.62
RARB-201ENST00000330688 LRRC55Q6ZSA7 311 aa11.17□□□□□ -0.62
RARB-201ENST00000330688 DNAJC19Q96DA6 116 aa11.17□□□□□ -0.62
RARB-201ENST00000330688 CCDC42Q96M95 316 aa11.17□□□□□ -0.62
RARB-201ENST00000330688 UIMC1Q96RL1 719 aa11.17□□□□□ -0.62
RARB-201ENST00000330688 PDE11AQ9HCR9 933 aa11.17□□□□□ -0.62
RARB-201ENST00000330688 SUGT1Q9Y2Z0 365 aa11.17□□□□□ -0.62
RARB-201ENST00000330688 ATP6V0A2Q9Y487 856 aa11.17□□□□□ -0.62
RARB-201ENST00000330688 EP400Q96L91 3159 aa11.16□□□□□ -0.62
RARB-201ENST00000330688 MACROD2A1Z1Q3 448 aa11.16□□□□□ -0.62
RARB-201ENST00000330688 ONECUT3O60422 494 aaPredicted RBP11.16□□□□□ -0.62
RARB-201ENST00000330688 IPO7O95373 1038 aaKnown RBP11.16□□□□□ -0.62
RARB-201ENST00000330688 VAV2P52735 878 aa11.16□□□□□ -0.62
RARB-201ENST00000330688 NFIAQ12857 509 aa11.16□□□□□ -0.62
RARB-201ENST00000330688 MAN2A1Q16706 1144 aa11.16□□□□□ -0.62
RARB-201ENST00000330688 PPP1R18Q6NYC8 613 aa11.16□□□□□ -0.62
RARB-201ENST00000330688 C2CD5Q86YS7 1000 aa11.16□□□□□ -0.62
RARB-201ENST00000330688 GPIHBP1Q8IV16 184 aa11.16□□□□□ -0.62
RARB-201ENST00000330688 ZFPM1Q8IX07 1006 aa11.16□□□□□ -0.62
RARB-201ENST00000330688 CAPZA3Q96KX2 299 aa11.16□□□□□ -0.62
RARB-201ENST00000330688 MMRN2Q9H8L6 949 aa11.16□□□□□ -0.62
RARB-201ENST00000330688 SWAP70Q9UH65 585 aa11.16□□□□□ -0.62
RARB-201ENST00000330688 MPHOSPH10O00566 681 aaKnown RBP11.16□□□□□ -0.62
RARB-201ENST00000330688 ZBTB5O15062 677 aa11.16□□□□□ -0.62
RARB-201ENST00000330688 ZNF185O15231 689 aa11.16□□□□□ -0.62
RARB-201ENST00000330688 USP14P54578 494 aa11.16□□□□□ -0.62
RARB-201ENST00000330688 LRRC63Q05C16 580 aa11.16□□□□□ -0.62
RARB-201ENST00000330688 CCDC96Q2M329 555 aa11.16□□□□□ -0.62
RARB-201ENST00000330688 APOBEC3HQ6NTF7 200 aaKnown RBP11.16□□□□□ -0.62
RARB-201ENST00000330688 WDR93Q6P2C0 686 aa11.16□□□□□ -0.62
RARB-201ENST00000330688 CCDC155Q8N6L0 562 aa11.16□□□□□ -0.62
RARB-201ENST00000330688 EHBP1Q8NDI1 1231 aa11.16□□□□□ -0.62
RARB-201ENST00000330688 SMCR8Q8TEV9 937 aaPredicted RBP11.16□□□□□ -0.62
RARB-201ENST00000330688 CUL5Q93034 780 aa11.16□□□□□ -0.62
RARB-201ENST00000330688 MTMR8Q96EF0 704 aa11.16□□□□□ -0.62
RARB-201ENST00000330688 ZC3H12CQ9C0D7 883 aaKnown RBP11.16□□□□□ -0.62
RARB-201ENST00000330688 PSTPIP2Q9H939 334 aa11.16□□□□□ -0.62
RARB-201ENST00000330688 RNF216Q9NWF9 866 aaPredicted RBP11.16□□□□□ -0.62
RARB-201ENST00000330688 PDE2AO00408 941 aaPredicted RBP11.15□□□□□ -0.62
RARB-201ENST00000330688 MRPL12P52815 198 aaKnown RBP11.15□□□□□ -0.62
RARB-201ENST00000330688 KIF5AQ12840 1032 aa11.15□□□□□ -0.62
RARB-201ENST00000330688 PCDHA12Q9UN75 941 aa11.15□□□□□ -0.62
RARB-201ENST00000330688 UBR3Q6ZT12 1888 aa11.15□□□□□ -0.62
RARB-201ENST00000330688 USP17L15C9J2P7 530 aa11.15□□□□□ -0.62
RARB-201ENST00000330688 USP17L13C9JLJ4 530 aa11.15□□□□□ -0.62
RARB-201ENST00000330688 USP17L11C9JVI0 530 aa11.15□□□□□ -0.62
RARB-201ENST00000330688 USP17L18D6R9N7 530 aa11.15□□□□□ -0.62
RARB-201ENST00000330688 USP17L22D6RA61 530 aa11.15□□□□□ -0.62
RARB-201ENST00000330688 USP17L17D6RBQ6 530 aa11.15□□□□□ -0.62
RARB-201ENST00000330688 USP17L19D6RCP7 530 aa11.15□□□□□ -0.62
RARB-201ENST00000330688 USP17L20D6RJB6 530 aa11.15□□□□□ -0.62
RARB-201ENST00000330688 N4BP1O75113 896 aaKnown RBP11.15□□□□□ -0.62
RARB-201ENST00000330688 USP17L24Q0WX57 530 aa11.15□□□□□ -0.62
RARB-201ENST00000330688 COASYQ13057 564 aa11.15□□□□□ -0.62
RARB-201ENST00000330688 PSMD2Q13200 908 aa11.15□□□□□ -0.62
RARB-201ENST00000330688 CASP8Q14790 479 aa11.15□□□□□ -0.62
RARB-201ENST00000330688 GPATCH4Q5T3I0 446 aaKnown RBP11.15□□□□□ -0.62
RARB-201ENST00000330688 USP17L6PQ6QN14 398 aa11.15□□□□□ -0.62
RARB-201ENST00000330688 FGFBP2Q9BYJ0 223 aa11.15□□□□□ -0.62
RARB-201ENST00000330688 ATF5Q9Y2D1 282 aaPredicted RBP11.15□□□□□ -0.62
RARB-201ENST00000330688 ABCB11O95342 1321 aa11.15□□□□□ -0.62
RARB-201ENST00000330688 LTBP1Q14766 1721 aa11.15□□□□□ -0.63
RARB-201ENST00000330688 FGFR1OPO95684 399 aaKnown RBP11.15□□□□□ -0.63
RARB-201ENST00000330688 TUBBP07437 444 aa11.15□□□□□ -0.63
RARB-201ENST00000330688 EIF4A3P38919 411 aaKnown RBP11.15□□□□□ -0.63
RARB-201ENST00000330688 SPA17Q15506 151 aa11.15□□□□□ -0.63
RARB-201ENST00000330688 SHROOM1Q2M3G4 852 aaPredicted RBP11.15□□□□□ -0.63
RARB-201ENST00000330688 TMC4Q7Z404 712 aa11.15□□□□□ -0.63
RARB-201ENST00000330688 MSL3Q8N5Y2 521 aaKnown RBP11.15□□□□□ -0.63
RARB-201ENST00000330688 NEK11Q8NG66 645 aa11.15□□□□□ -0.63
RARB-201ENST00000330688 BAP1Q92560 729 aa11.15□□□□□ -0.63
RARB-201ENST00000330688 SECISBP2LQ93073 1101 aaKnown RBP11.15□□□□□ -0.63
RARB-201ENST00000330688 IQCDQ96DY2 449 aa11.15□□□□□ -0.63
RARB-201ENST00000330688 DNAJC18Q9H819 358 aa11.15□□□□□ -0.63
RARB-201ENST00000330688 ADAM21Q9UKJ8 722 aa11.15□□□□□ -0.63
RARB-201ENST00000330688 PCDHA13Q9Y5I0 950 aa11.15□□□□□ -0.63
RARB-201ENST00000330688 SPATA31A6Q5VVP1 1343 aa11.14□□□□□ -0.63
RARB-201ENST00000330688 MYO3BQ8WXR4 1341 aa11.14□□□□□ -0.63
RARB-201ENST00000330688 ANO9A1A5B4 782 aa11.14□□□□□ -0.63
RARB-201ENST00000330688 LRRC53A6NM62 1247 aa11.14□□□□□ -0.63
RARB-201ENST00000330688 LRRIQ3A6PVS8 624 aaPredicted RBP11.14□□□□□ -0.63
RARB-201ENST00000330688 E9PMD0 336 aa11.14□□□□□ -0.63
RARB-201ENST00000330688 MARCH6O60337 910 aa11.14□□□□□ -0.63
RARB-201ENST00000330688 KIF11P52732 1056 aa11.14□□□□□ -0.63
RARB-201ENST00000330688 KCNMA1Q12791 1236 aa11.14□□□□□ -0.63
RARB-201ENST00000330688 ZCWPW2Q504Y3 356 aa11.14□□□□□ -0.63
RARB-201ENST00000330688 RRAGAQ7L523 313 aa11.14□□□□□ -0.63
RARB-201ENST00000330688 CCDC84Q86UT8 332 aaPredicted RBP11.14□□□□□ -0.63
RARB-201ENST00000330688 MYOCDQ8IZQ8 938 aa11.14□□□□□ -0.63
RARB-201ENST00000330688 LRRC27Q9C0I9 530 aa11.14□□□□□ -0.63
RARB-201ENST00000330688 GBP3Q9H0R5 595 aa11.14□□□□□ -0.63
RARB-201ENST00000330688 FOCADQ5VW36 1801 aa11.14□□□□□ -0.63
RARB-201ENST00000330688 FAM196BA6NMK8 535 aa11.14□□□□□ -0.63
RARB-201ENST00000330688 HYIQ5T013 277 aa11.14□□□□□ -0.63
RARB-201ENST00000330688 IFIH1Q9BYX4 1025 aaKnown RBP11.14□□□□□ -0.63
RARB-201ENST00000330688 MLXIPQ9HAP2 919 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms