RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 RIOX2Q8IUF8 465 aa7.5□□□□□ -1.21
SMG1-201ENST00000330588 EXOC6Q8TAG9 804 aa7.5□□□□□ -1.21
SMG1-201ENST00000330588 TRIB2Q92519 343 aa7.5□□□□□ -1.21
SMG1-201ENST00000330588 CCDC97Q96F63 343 aaPredicted RBP7.5□□□□□ -1.21
SMG1-201ENST00000330588 ESYT1Q9BSJ8 1104 aa7.5□□□□□ -1.21
SMG1-201ENST00000330588 PAGR1Q9BTK6 254 aa7.5□□□□□ -1.21
SMG1-201ENST00000330588 TANGO6Q9C0B7 1094 aa7.5□□□□□ -1.21
SMG1-201ENST00000330588 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.5□□□□□ -1.21
SMG1-201ENST00000330588 PPP1R9AQ9ULJ8 1098 aa7.5□□□□□ -1.21
SMG1-201ENST00000330588 DIS3Q9Y2L1 958 aaKnown RBP7.5□□□□□ -1.21
SMG1-201ENST00000330588 CNTNAP5Q8WYK1 1306 aa7.5□□□□□ -1.21
SMG1-201ENST00000330588 MINDY4BA8MYZ0 360 aa7.5□□□□□ -1.21
SMG1-201ENST00000330588 FLOT1O75955 427 aa7.5□□□□□ -1.21
SMG1-201ENST00000330588 FARP2O94887 1054 aaPredicted RBP7.5□□□□□ -1.21
SMG1-201ENST00000330588 IGHDP01880 384 aa7.5□□□□□ -1.21
SMG1-201ENST00000330588 ITGB2P05107 769 aa7.5□□□□□ -1.21
SMG1-201ENST00000330588 OAZ1P54368 228 aa7.5□□□□□ -1.21
SMG1-201ENST00000330588 KIAA1755Q5JYT7 1200 aa7.5□□□□□ -1.21
SMG1-201ENST00000330588 MSL3Q8N5Y2 521 aaKnown RBP7.5□□□□□ -1.21
SMG1-201ENST00000330588 PRPF38AQ8NAV1 312 aaKnown RBP7.5□□□□□ -1.21
SMG1-201ENST00000330588 REPS2Q8NFH8 660 aa7.5□□□□□ -1.21
SMG1-201ENST00000330588 SEC62Q99442 399 aaKnown RBP7.5□□□□□ -1.21
SMG1-201ENST00000330588 MOV10L1Q9BXT6 1211 aaKnown RBP7.5□□□□□ -1.21
SMG1-201ENST00000330588 LNPKQ9C0E8 428 aa7.5□□□□□ -1.21
SMG1-201ENST00000330588 NUCKS1Q9H1E3 243 aaKnown RBP7.5□□□□□ -1.21
SMG1-201ENST00000330588 TCP11L1Q9NUJ3 509 aa7.5□□□□□ -1.21
SMG1-201ENST00000330588 OGDHLQ9ULD0 1010 aa7.5□□□□□ -1.21
SMG1-201ENST00000330588 CCDC171Q6TFL3 1326 aa7.49□□□□□ -1.21
SMG1-201ENST00000330588 F5H6K3 240 aa7.49□□□□□ -1.21
SMG1-201ENST00000330588 SMIM22K7EJ46 135 aa7.49□□□□□ -1.21
SMG1-201ENST00000330588 VWA5AO00534 786 aa7.49□□□□□ -1.21
SMG1-201ENST00000330588 TSPY3P0CV98 308 aa7.49□□□□□ -1.21
SMG1-201ENST00000330588 TSPY8P0CW00 308 aa7.49□□□□□ -1.21
SMG1-201ENST00000330588 MX2P20592 715 aa7.49□□□□□ -1.21
SMG1-201ENST00000330588 CENPCQ03188 943 aa7.49□□□□□ -1.21
SMG1-201ENST00000330588 KLRC3Q07444 240 aa7.49□□□□□ -1.21
SMG1-201ENST00000330588 MFSD14CQ5VZR4 134 aa7.49□□□□□ -1.21
SMG1-201ENST00000330588 FAM160B2Q86V87 743 aa7.49□□□□□ -1.21
SMG1-201ENST00000330588 BEND7Q8N7W2 519 aaPredicted RBP7.49□□□□□ -1.21
SMG1-201ENST00000330588 CEP95Q96GE4 821 aa7.49□□□□□ -1.21
SMG1-201ENST00000330588 SLF1Q9BQI6 1058 aa7.49□□□□□ -1.21
SMG1-201ENST00000330588 MAF1Q9H063 256 aa7.49□□□□□ -1.21
SMG1-201ENST00000330588 CWC22Q9HCG8 908 aaKnown RBP7.49□□□□□ -1.21
SMG1-201ENST00000330588 FEM1BQ9UK73 627 aa7.49□□□□□ -1.21
SMG1-201ENST00000330588 COL11A1P12107 1806 aaPredicted RBP7.49□□□□□ -1.21
SMG1-201ENST00000330588 FRMPD3Q5JV73 1810 aa7.49□□□□□ -1.21
SMG1-201ENST00000330588 RAD50Q92878 1312 aa7.49□□□□□ -1.21
SMG1-201ENST00000330588 A0A0D9SFI3 127 aa7.48□□□□□ -1.21
SMG1-201ENST00000330588 PIK3CDO00329 1044 aa7.48□□□□□ -1.21
SMG1-201ENST00000330588 OIP5O43482 229 aa7.48□□□□□ -1.21
SMG1-201ENST00000330588 NDUFB10O96000 172 aa7.48□□□□□ -1.21
SMG1-201ENST00000330588 HSPD1P10809 573 aaKnown RBP7.48□□□□□ -1.21
SMG1-201ENST00000330588 FCER1AP12319 257 aa7.48□□□□□ -1.21
SMG1-201ENST00000330588 ERCC3P19447 782 aa7.48□□□□□ -1.21
SMG1-201ENST00000330588 SDSP20132 328 aa7.48□□□□□ -1.21
SMG1-201ENST00000330588 CYP2B6P20813 491 aa7.48□□□□□ -1.21
SMG1-201ENST00000330588 CACNB2Q08289 660 aaPredicted RBP7.48□□□□□ -1.21
SMG1-201ENST00000330588 SEMA3FQ13275 785 aa7.48□□□□□ -1.21
SMG1-201ENST00000330588 UBAP2LQ14157 1087 aaKnown RBP7.48□□□□□ -1.21
SMG1-201ENST00000330588 CCDC178Q5BJE1 867 aa7.48□□□□□ -1.21
SMG1-201ENST00000330588 CHURC1Q8WUH1 139 aa7.48□□□□□ -1.21
SMG1-201ENST00000330588 STAG1Q8WVM7 1258 aa7.48□□□□□ -1.21
SMG1-201ENST00000330588 ATG4CQ96DT6 458 aa7.48□□□□□ -1.21
SMG1-201ENST00000330588 DSCC1Q9BVC3 393 aa7.48□□□□□ -1.21
SMG1-201ENST00000330588 RNF41Q9H4P4 317 aaPredicted RBP7.48□□□□□ -1.21
SMG1-201ENST00000330588 RAB6BQ9NRW1 208 aa7.48□□□□□ -1.21
SMG1-201ENST00000330588 CLIP2Q9UDT6 1046 aa7.48□□□□□ -1.21
SMG1-201ENST00000330588 FBXO40Q9UH90 709 aa7.48□□□□□ -1.21
SMG1-201ENST00000330588 PNMA2Q9UL42 364 aa7.48□□□□□ -1.21
SMG1-201ENST00000330588 ZNF214Q9UL59 606 aaPredicted RBP7.48□□□□□ -1.21
SMG1-201ENST00000330588 SUPT16HQ9Y5B9 1047 aaKnown RBP7.48□□□□□ -1.21
SMG1-201ENST00000330588 FGAP02671 866 aa7.47□□□□□ -1.21
SMG1-201ENST00000330588 TFRCP02786 760 aaKnown RBP7.47□□□□□ -1.21
SMG1-201ENST00000330588 CYBAP13498 195 aa7.47□□□□□ -1.21
SMG1-201ENST00000330588 ADORA2AP29274 412 aa7.47□□□□□ -1.21
SMG1-201ENST00000330588 STAT3P40763 770 aa7.47□□□□□ -1.21
SMG1-201ENST00000330588 ATP2B2Q01814 1243 aa7.47□□□□□ -1.21
SMG1-201ENST00000330588 NMIQ13287 307 aaPredicted RBP7.47□□□□□ -1.21
SMG1-201ENST00000330588 TMEM132BQ14DG7 1078 aa7.47□□□□□ -1.21
SMG1-201ENST00000330588 TKFCQ3LXA3 575 aa7.47□□□□□ -1.21
SMG1-201ENST00000330588 PLA2G4EQ3MJ16 856 aa7.47□□□□□ -1.21
SMG1-201ENST00000330588 FAM83BQ5T0W9 1011 aa7.47□□□□□ -1.21
SMG1-201ENST00000330588 NECAB2Q7Z6G3 386 aa7.47□□□□□ -1.21
SMG1-201ENST00000330588 CLEC10AQ8IUN9 316 aa7.47□□□□□ -1.21
SMG1-201ENST00000330588 SPICE1Q8N0Z3 855 aa7.47□□□□□ -1.21
SMG1-201ENST00000330588 CHST13Q8NET6 341 aa7.47□□□□□ -1.21
SMG1-201ENST00000330588 TTC14Q96N46 770 aa7.47□□□□□ -1.21
SMG1-201ENST00000330588 DEFB118Q96PH6 123 aa7.47□□□□□ -1.21
SMG1-201ENST00000330588 TEX13BQ9BXU2 312 aa7.47□□□□□ -1.21
SMG1-201ENST00000330588 NR2E3Q9Y5X4 410 aa7.47□□□□□ -1.21
SMG1-201ENST00000330588 LOC102724159A0A0B4J2E5 919 aa7.46□□□□□ -1.21
SMG1-201ENST00000330588 A0A1W2PPC1 479 aa7.46□□□□□ -1.21
SMG1-201ENST00000330588 TSPY2A6NKD2 308 aa7.46□□□□□ -1.21
SMG1-201ENST00000330588 ZBED4O75132 1171 aa7.46□□□□□ -1.21
SMG1-201ENST00000330588 BMP3P12645 472 aa7.46□□□□□ -1.21
SMG1-201ENST00000330588 MAP2K3P46734 347 aa7.46□□□□□ -1.21
SMG1-201ENST00000330588 STAT2P52630 851 aa7.46□□□□□ -1.21
SMG1-201ENST00000330588 TFAP4Q01664 338 aa7.46□□□□□ -1.21
SMG1-201ENST00000330588 PWP2Q15269 919 aaKnown RBP7.46□□□□□ -1.21
SMG1-201ENST00000330588 AKNAD1Q5T1N1 836 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms