RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 RRP1P56182 461 aaKnown RBP17.65■□□□□ 0.42
CTHRC1-201ENST00000330295 TRAF7Q6Q0C0 670 aa17.65■□□□□ 0.42
CTHRC1-201ENST00000330295 RPGRIP1Q96KN7 1286 aa17.65■□□□□ 0.42
CTHRC1-201ENST00000330295 PHF7Q9BWX1 381 aaPredicted RBP17.65■□□□□ 0.42
CTHRC1-201ENST00000330295 TCRBV5S4A2TA0A5A2 114 aa17.64■□□□□ 0.41
CTHRC1-201ENST00000330295 C5orf67F2Z3F1 127 aa17.64■□□□□ 0.41
CTHRC1-201ENST00000330295 RB1P06400 928 aa17.64■□□□□ 0.41
CTHRC1-201ENST00000330295 CTNNB1P35222 781 aa17.64■□□□□ 0.41
CTHRC1-201ENST00000330295 COASYQ13057 564 aa17.64■□□□□ 0.41
CTHRC1-201ENST00000330295 PPP2R5BQ15173 497 aa17.64■□□□□ 0.41
CTHRC1-201ENST00000330295 MUM1L1Q5H9M0 696 aa17.64■□□□□ 0.41
CTHRC1-201ENST00000330295 ZNF618Q5T7W0 954 aa17.64■□□□□ 0.41
CTHRC1-201ENST00000330295 LRRC47Q8N1G4 583 aaKnown RBP17.64■□□□□ 0.41
CTHRC1-201ENST00000330295 TMEM105Q8N8V8 129 aa17.64■□□□□ 0.41
CTHRC1-201ENST00000330295 DBF4BQ8NFT6 615 aa17.64■□□□□ 0.41
CTHRC1-201ENST00000330295 TOP1MTQ969P6 601 aa17.64■□□□□ 0.41
CTHRC1-201ENST00000330295 EAF2Q96CJ1 260 aaPredicted RBP17.64■□□□□ 0.41
CTHRC1-201ENST00000330295 C11orf84Q9BUA3 381 aaPredicted RBP17.64■□□□□ 0.41
CTHRC1-201ENST00000330295 CLEC1BQ9P126 229 aa17.64■□□□□ 0.41
CTHRC1-201ENST00000330295 ADD3Q9UEY8 706 aaKnown RBP17.64■□□□□ 0.41
CTHRC1-201ENST00000330295 USP15Q9Y4E8 981 aaPredicted RBP17.64■□□□□ 0.41
CTHRC1-201ENST00000330295 CHD6Q8TD26 2715 aa17.63■□□□□ 0.41
CTHRC1-201ENST00000330295 CEP250Q9BV73 2442 aa17.63■□□□□ 0.41
CTHRC1-201ENST00000330295 WDR87Q6ZQQ6 2873 aa17.63■□□□□ 0.41
CTHRC1-201ENST00000330295 ALDH5A1P51649 535 aaPredicted RBP17.63■□□□□ 0.41
CTHRC1-201ENST00000330295 PUM1Q14671 1186 aaKnown RBP eCLIP17.63■□□□□ 0.41
CTHRC1-201ENST00000330295 TTF1Q15361 905 aaPredicted RBP17.63■□□□□ 0.41
CTHRC1-201ENST00000330295 NSMFQ6X4W1 530 aa17.63■□□□□ 0.41
CTHRC1-201ENST00000330295 RPAP2Q8IXW5 612 aaPredicted RBP17.63■□□□□ 0.41
CTHRC1-201ENST00000330295 COPS5Q92905 334 aa17.63■□□□□ 0.41
CTHRC1-201ENST00000330295 CLIP2Q9UDT6 1046 aa17.63■□□□□ 0.41
CTHRC1-201ENST00000330295 GTF2IRD1Q9UHL9 959 aa17.63■□□□□ 0.41
CTHRC1-201ENST00000330295 EMSYQ7Z589 1322 aa17.63■□□□□ 0.41
CTHRC1-201ENST00000330295 ATRXP46100 2492 aa17.63■□□□□ 0.41
CTHRC1-201ENST00000330295 LOC102724159A0A0B4J2E5 919 aa17.62■□□□□ 0.41
CTHRC1-201ENST00000330295 UPP2O95045 317 aa17.62■□□□□ 0.41
CTHRC1-201ENST00000330295 PWP2Q15269 919 aaKnown RBP17.62■□□□□ 0.41
CTHRC1-201ENST00000330295 TRIM71Q2Q1W2 868 aaKnown RBP17.62■□□□□ 0.41
CTHRC1-201ENST00000330295 PKD1L2Q7Z442 2459 aa17.62■□□□□ 0.41
CTHRC1-201ENST00000330295 MAP1BP46821 2468 aaKnown RBP17.61■□□□□ 0.41
CTHRC1-201ENST00000330295 TMEM232C9JQI7 657 aa17.61■□□□□ 0.41
CTHRC1-201ENST00000330295 CSPG5O95196 566 aa17.61■□□□□ 0.41
CTHRC1-201ENST00000330295 BMP3P12645 472 aa17.61■□□□□ 0.41
CTHRC1-201ENST00000330295 STAT2P52630 851 aa17.61■□□□□ 0.41
CTHRC1-201ENST00000330295 PTK7Q13308 1070 aa17.61■□□□□ 0.41
CTHRC1-201ENST00000330295 CFAP47Q6ZTR5 3102 aa17.61■□□□□ 0.41
CTHRC1-201ENST00000330295 IPO8O15397 1037 aaKnown RBP17.6■□□□□ 0.41
CTHRC1-201ENST00000330295 SURF6O75683 361 aaKnown RBP17.6■□□□□ 0.41
CTHRC1-201ENST00000330295 MBD4O95243 580 aa17.6■□□□□ 0.41
CTHRC1-201ENST00000330295 MMP1P03956 469 aa17.6■□□□□ 0.41
CTHRC1-201ENST00000330295 RASA1P20936 1047 aa17.6■□□□□ 0.41
CTHRC1-201ENST00000330295 BMPR1AP36894 532 aa17.6■□□□□ 0.41
CTHRC1-201ENST00000330295 FIBCD1Q8N539 461 aa17.6■□□□□ 0.41
CTHRC1-201ENST00000330295 EFHBQ8N7U6 833 aa17.6■□□□□ 0.41
CTHRC1-201ENST00000330295 GMCL1P1Q8NEA9 526 aa17.6■□□□□ 0.41
CTHRC1-201ENST00000330295 SCFD2Q8WU76 684 aa17.6■□□□□ 0.41
CTHRC1-201ENST00000330295 KAT2BQ92831 832 aa17.6■□□□□ 0.41
CTHRC1-201ENST00000330295 WNT8BQ93098 351 aa17.6■□□□□ 0.41
CTHRC1-201ENST00000330295 PPP2R3CQ969Q6 453 aa17.6■□□□□ 0.41
CTHRC1-201ENST00000330295 MKL1Q969V6 931 aa17.6■□□□□ 0.41
CTHRC1-201ENST00000330295 DDRGK1Q96HY6 314 aa17.6■□□□□ 0.41
CTHRC1-201ENST00000330295 HDAC6Q9UBN7 1215 aa17.6■□□□□ 0.41
CTHRC1-201ENST00000330295 ZBED9Q6R2W3 1325 aa17.59■□□□□ 0.41
CTHRC1-201ENST00000330295 LINC00271P0C7V0 271 aa17.59■□□□□ 0.41
CTHRC1-201ENST00000330295 PLEKHG4Q58EX7 1191 aa17.59■□□□□ 0.41
CTHRC1-201ENST00000330295 CTR9Q6PD62 1173 aa17.59■□□□□ 0.41
CTHRC1-201ENST00000330295 ZBTB33Q86T24 672 aa17.59■□□□□ 0.41
CTHRC1-201ENST00000330295 FAM160B2Q86V87 743 aa17.59■□□□□ 0.41
CTHRC1-201ENST00000330295 IFIH1Q9BYX4 1025 aaKnown RBP17.59■□□□□ 0.41
CTHRC1-201ENST00000330295 ISY1Q9ULR0 285 aaKnown RBP17.59■□□□□ 0.41
CTHRC1-201ENST00000330295 SYNPO2Q9UMS6 1093 aa17.59■□□□□ 0.41
CTHRC1-201ENST00000330295 RWDD3Q9Y3V2 267 aa17.59■□□□□ 0.41
CTHRC1-201ENST00000330295 IGKV6D-41A0A0C4DH26 115 aa17.58■□□□□ 0.4
CTHRC1-201ENST00000330295 TXNP10599 105 aaKnown RBP17.58■□□□□ 0.4
CTHRC1-201ENST00000330295 ATF7P17544 494 aaPredicted RBP17.58■□□□□ 0.4
CTHRC1-201ENST00000330295 RARSP54136 660 aaKnown RBP17.58■□□□□ 0.4
CTHRC1-201ENST00000330295 PDE4BQ07343 736 aa17.58■□□□□ 0.4
CTHRC1-201ENST00000330295 IKQ13123 557 aaPredicted RBP17.58■□□□□ 0.4
CTHRC1-201ENST00000330295 BAATQ14032 418 aaPredicted RBP17.58■□□□□ 0.4
CTHRC1-201ENST00000330295 SLFN13Q68D06 897 aa17.58■□□□□ 0.4
CTHRC1-201ENST00000330295 KIAA2013Q8IYS2 634 aa17.58■□□□□ 0.4
CTHRC1-201ENST00000330295 C7orf31Q8N865 590 aa17.58■□□□□ 0.4
CTHRC1-201ENST00000330295 CHURC1Q8WUH1 139 aa17.58■□□□□ 0.4
CTHRC1-201ENST00000330295 IL17RAQ96F46 866 aa17.58■□□□□ 0.4
CTHRC1-201ENST00000330295 PCDHGC5Q9Y5F6 944 aa17.58■□□□□ 0.4
CTHRC1-201ENST00000330295 SPTBN2O15020 2390 aa17.58■□□□□ 0.4
CTHRC1-201ENST00000330295 MMP3P08254 477 aa17.57■□□□□ 0.4
CTHRC1-201ENST00000330295 CAMK1Q14012 370 aa17.57■□□□□ 0.4
CTHRC1-201ENST00000330295 ST3GAL2Q16842 350 aa17.57■□□□□ 0.4
CTHRC1-201ENST00000330295 ASTLQ6HA08 431 aaPredicted RBP17.57■□□□□ 0.4
CTHRC1-201ENST00000330295 SSH3Q8TE77 659 aa17.57■□□□□ 0.4
CTHRC1-201ENST00000330295 AFG1LQ8WV93 481 aa17.57■□□□□ 0.4
CTHRC1-201ENST00000330295 STAG1Q8WVM7 1258 aa17.57■□□□□ 0.4
CTHRC1-201ENST00000330295 MKNK2Q9HBH9 465 aa17.57■□□□□ 0.4
CTHRC1-201ENST00000330295 BARX2Q9UMQ3 279 aaPredicted RBP17.57■□□□□ 0.4
CTHRC1-201ENST00000330295 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.56■□□□□ 0.4
CTHRC1-201ENST00000330295 RSPH10B2B2RC85 870 aa17.56■□□□□ 0.4
CTHRC1-201ENST00000330295 GLP2RO95838 553 aa17.56■□□□□ 0.4
CTHRC1-201ENST00000330295 RSPH10BP0C881 870 aa17.56■□□□□ 0.4
CTHRC1-201ENST00000330295 SNAP25P60880 206 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms