RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 SLC39A2Q9NP94 309 aa17.77■□□□□ 0.43
PGBD2-201ENST00000329291 COPB1P53618 953 aaKnown RBP17.76■□□□□ 0.43
PGBD2-201ENST00000329291 RBL2Q08999 1139 aa17.76■□□□□ 0.43
PGBD2-201ENST00000329291 DGKZQ13574 1117 aa17.76■□□□□ 0.43
PGBD2-201ENST00000329291 ANKRD40Q6AI12 368 aa17.76■□□□□ 0.43
PGBD2-201ENST00000329291 ARHGAP27Q6ZUM4 889 aa17.76■□□□□ 0.43
PGBD2-201ENST00000329291 MYRIPQ8NFW9 859 aa17.76■□□□□ 0.43
PGBD2-201ENST00000329291 PRIMPOLQ96LW4 560 aa17.76■□□□□ 0.43
PGBD2-201ENST00000329291 CTAGE1Q96RT6 745 aa17.76■□□□□ 0.43
PGBD2-201ENST00000329291 NAP1L4Q99733 375 aaKnown RBP17.76■□□□□ 0.43
PGBD2-201ENST00000329291 SRRTQ9BXP5 876 aaKnown RBP17.76■□□□□ 0.43
PGBD2-201ENST00000329291 RANBP17Q9H2T7 1088 aaKnown RBP17.76■□□□□ 0.43
PGBD2-201ENST00000329291 ZNF541Q9H0D2 1346 aa17.76■□□□□ 0.43
PGBD2-201ENST00000329291 SPDYE3A6NKU9 549 aa17.75■□□□□ 0.43
PGBD2-201ENST00000329291 INPP5BP32019 993 aa17.75■□□□□ 0.43
PGBD2-201ENST00000329291 SPIRE1Q08AE8 756 aa17.75■□□□□ 0.43
PGBD2-201ENST00000329291 CPLX3Q8WVH0 158 aa17.75■□□□□ 0.43
PGBD2-201ENST00000329291 TSC1Q92574 1164 aa17.75■□□□□ 0.43
PGBD2-201ENST00000329291 PPP1R13BQ96KQ4 1090 aa17.75■□□□□ 0.43
PGBD2-201ENST00000329291 HACL1Q9UJ83 578 aa17.75■□□□□ 0.43
PGBD2-201ENST00000329291 E9PMD0 336 aa17.75■□□□□ 0.43
PGBD2-201ENST00000329291 PIK3CDO00329 1044 aa17.75■□□□□ 0.43
PGBD2-201ENST00000329291 PSMA7O14818 248 aa17.75■□□□□ 0.43
PGBD2-201ENST00000329291 N4BP3O15049 544 aa17.75■□□□□ 0.43
PGBD2-201ENST00000329291 FOSP01100 380 aaPredicted RBP17.75■□□□□ 0.43
PGBD2-201ENST00000329291 SEMA3FQ13275 785 aa17.75■□□□□ 0.43
PGBD2-201ENST00000329291 Q4G0T1 1027 aa17.75■□□□□ 0.43
PGBD2-201ENST00000329291 HYIQ5T013 277 aa17.75■□□□□ 0.43
PGBD2-201ENST00000329291 MOXD1Q6UVY6 613 aa17.75■□□□□ 0.43
PGBD2-201ENST00000329291 GLIS3Q8NEA6 775 aa17.75■□□□□ 0.43
PGBD2-201ENST00000329291 CHURC1Q8WUH1 139 aa17.75■□□□□ 0.43
PGBD2-201ENST00000329291 DDX12PQ92771 950 aa17.75■□□□□ 0.43
PGBD2-201ENST00000329291 DHTKD1Q96HY7 919 aaPredicted RBP17.75■□□□□ 0.43
PGBD2-201ENST00000329291 ZNF341Q9BYN7 854 aa17.75■□□□□ 0.43
PGBD2-201ENST00000329291 KIAA1024Q9UPX6 916 aa17.75■□□□□ 0.43
PGBD2-201ENST00000329291 POTEB3A0JP26 581 aa17.74■□□□□ 0.43
PGBD2-201ENST00000329291 POTECB2RU33 542 aa17.74■□□□□ 0.43
PGBD2-201ENST00000329291 RNF225M0QZC1 329 aaPredicted RBP17.74■□□□□ 0.43
PGBD2-201ENST00000329291 RIOK3O14730 519 aaKnown RBP17.74■□□□□ 0.43
PGBD2-201ENST00000329291 NKRFO15226 690 aaKnown RBP eCLIP17.74■□□□□ 0.43
PGBD2-201ENST00000329291 MED24O75448 989 aa17.74■□□□□ 0.43
PGBD2-201ENST00000329291 CFBP00751 764 aa17.74■□□□□ 0.43
PGBD2-201ENST00000329291 LMNB1P20700 586 aa17.74■□□□□ 0.43
PGBD2-201ENST00000329291 PTPN14Q15678 1187 aa17.74■□□□□ 0.43
PGBD2-201ENST00000329291 POTEBQ6S5H4 581 aa17.74■□□□□ 0.43
PGBD2-201ENST00000329291 SLC30A10Q6XR72 485 aa17.74■□□□□ 0.43
PGBD2-201ENST00000329291 SEMA6BQ9H3T3 888 aa17.74■□□□□ 0.43
PGBD2-201ENST00000329291 SRCAPQ6ZRS2 3230 aa17.74■□□□□ 0.43
PGBD2-201ENST00000329291 MSH4O15457 936 aa17.74■□□□□ 0.43
PGBD2-201ENST00000329291 KCNJ6P48051 423 aa17.74■□□□□ 0.43
PGBD2-201ENST00000329291 STIM1Q13586 685 aa17.74■□□□□ 0.43
PGBD2-201ENST00000329291 FILIP1LQ4L180 1135 aa17.74■□□□□ 0.43
PGBD2-201ENST00000329291 UNC13DQ70J99 1090 aa17.74■□□□□ 0.43
PGBD2-201ENST00000329291 CCDC112Q8NEF3 446 aa17.74■□□□□ 0.43
PGBD2-201ENST00000329291 P2RX5Q93086 422 aa17.74■□□□□ 0.43
PGBD2-201ENST00000329291 DNAJC19Q96DA6 116 aa17.74■□□□□ 0.43
PGBD2-201ENST00000329291 TRIM47Q96LD4 638 aa17.74■□□□□ 0.43
PGBD2-201ENST00000329291 BAG1Q99933 345 aaPredicted RBP17.74■□□□□ 0.43
PGBD2-201ENST00000329291 PVALEFA0A1B0GWK0 134 aa17.73■□□□□ 0.43
PGBD2-201ENST00000329291 CCNE1P24864 410 aa17.73■□□□□ 0.43
PGBD2-201ENST00000329291 CIITAP33076 1130 aa17.73■□□□□ 0.43
PGBD2-201ENST00000329291 TRAF1Q13077 416 aa17.73■□□□□ 0.43
PGBD2-201ENST00000329291 SLFN12Q8IYM2 578 aa17.73■□□□□ 0.43
PGBD2-201ENST00000329291 ZFP91Q96JP5 570 aaPredicted RBP17.73■□□□□ 0.43
PGBD2-201ENST00000329291 DEFB129Q9H1M3 183 aa17.73■□□□□ 0.43
PGBD2-201ENST00000329291 NPHP3-ACAD11A0A0J9YXS1 232 aa17.72■□□□□ 0.43
PGBD2-201ENST00000329291 PLA2G6O60733 806 aa17.72■□□□□ 0.43
PGBD2-201ENST00000329291 IDEP14735 1019 aa17.72■□□□□ 0.43
PGBD2-201ENST00000329291 UBXN2AP68543 259 aa17.72■□□□□ 0.43
PGBD2-201ENST00000329291 EHHADHQ08426 723 aa17.72■□□□□ 0.43
PGBD2-201ENST00000329291 NBPF12Q5TAG4 269 aaPredicted RBP17.72■□□□□ 0.43
PGBD2-201ENST00000329291 MCTP2Q6DN12 878 aa17.72■□□□□ 0.43
PGBD2-201ENST00000329291 CNNM4Q6P4Q7 775 aa17.72■□□□□ 0.43
PGBD2-201ENST00000329291 ZNF592Q92610 1267 aa17.72■□□□□ 0.43
PGBD2-201ENST00000329291 CCDC47Q96A33 483 aaKnown RBP17.72■□□□□ 0.43
PGBD2-201ENST00000329291 THAP9Q9H5L6 903 aa17.72■□□□□ 0.43
PGBD2-201ENST00000329291 GINM1Q9NU53 330 aa17.72■□□□□ 0.43
PGBD2-201ENST00000329291 FEM1BQ9UK73 627 aa17.72■□□□□ 0.43
PGBD2-201ENST00000329291 IGLV3-22A0A075B6J6 115 aa17.72■□□□□ 0.43
PGBD2-201ENST00000329291 AKR1B15C9JRZ8 316 aaPredicted RBP17.72■□□□□ 0.43
PGBD2-201ENST00000329291 GYPCP04921 128 aa17.72■□□□□ 0.43
PGBD2-201ENST00000329291 CYP3A4P08684 503 aa17.72■□□□□ 0.43
PGBD2-201ENST00000329291 FXR1P51114 621 aaKnown RBP eCLIP17.72■□□□□ 0.43
PGBD2-201ENST00000329291 SPAG1Q07617 926 aa17.72■□□□□ 0.43
PGBD2-201ENST00000329291 LDHDQ86WU2 507 aa17.72■□□□□ 0.43
PGBD2-201ENST00000329291 CATSPER3Q86XQ3 398 aa17.72■□□□□ 0.43
PGBD2-201ENST00000329291 CSGALNACT2Q8N6G5 542 aa17.72■□□□□ 0.43
PGBD2-201ENST00000329291 AGBL1Q96MI9 1066 aa17.72■□□□□ 0.43
PGBD2-201ENST00000329291 FEZ1Q99689 392 aa17.72■□□□□ 0.43
PGBD2-201ENST00000329291 POTEFA5A3E0 1075 aa17.71■□□□□ 0.43
PGBD2-201ENST00000329291 SSBP05455 408 aaKnown RBP eCLIP17.71■□□□□ 0.43
PGBD2-201ENST00000329291 POTEIP0CG38 1075 aa17.71■□□□□ 0.43
PGBD2-201ENST00000329291 SPATA31C1P0DKV0 1188 aa17.71■□□□□ 0.43
PGBD2-201ENST00000329291 CASP14P31944 242 aa17.71■□□□□ 0.43
PGBD2-201ENST00000329291 PSMC6P62333 389 aa17.71■□□□□ 0.43
PGBD2-201ENST00000329291 LRRC41Q15345 812 aa17.71■□□□□ 0.43
PGBD2-201ENST00000329291 PRAMEF18Q5VWM3 479 aa17.71■□□□□ 0.43
PGBD2-201ENST00000329291 POTEGQ6S5H5 508 aa17.71■□□□□ 0.43
PGBD2-201ENST00000329291 POTEEQ6S8J3 1075 aa17.71■□□□□ 0.43
PGBD2-201ENST00000329291 TOGARAM2Q6ZUX3 1019 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms