RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 ZNF76P36508 570 aa16.74■□□□□ 0.27
TPM3-205ENST00000328159 HIRAP54198 1017 aaPredicted RBP16.74■□□□□ 0.27
TPM3-205ENST00000328159 USP14P54578 494 aa16.74■□□□□ 0.27
TPM3-205ENST00000328159 PDE4DQ08499 809 aa16.74■□□□□ 0.27
TPM3-205ENST00000328159 DGKZQ13574 1117 aa16.74■□□□□ 0.27
TPM3-205ENST00000328159 STIM1Q13586 685 aa16.74■□□□□ 0.27
TPM3-205ENST00000328159 MTMR2Q13614 643 aa16.74■□□□□ 0.27
TPM3-205ENST00000328159 ECM1Q16610 540 aa16.74■□□□□ 0.27
TPM3-205ENST00000328159 PRAMEF18Q5VWM3 479 aa16.74■□□□□ 0.27
TPM3-205ENST00000328159 KCNK18Q7Z418 384 aa16.74■□□□□ 0.27
TPM3-205ENST00000328159 WDR18Q9BV38 432 aa16.74■□□□□ 0.27
TPM3-205ENST00000328159 LRRC27Q9C0I9 530 aa16.74■□□□□ 0.27
TPM3-205ENST00000328159 NT5C3AQ9H0P0 336 aa16.74■□□□□ 0.27
TPM3-205ENST00000328159 EHMT1Q9H9B1 1298 aa16.74■□□□□ 0.27
TPM3-205ENST00000328159 EMILIN3Q9NT22 766 aa16.74■□□□□ 0.27
TPM3-205ENST00000328159 CCPG1Q9ULG6 757 aa16.74■□□□□ 0.27
TPM3-205ENST00000328159 PPP2R3BQ9Y5P8 575 aa16.74■□□□□ 0.27
TPM3-205ENST00000328159 ZNF536O15090 1300 aa16.73■□□□□ 0.27
TPM3-205ENST00000328159 MYMKA6NI61 221 aa16.73■□□□□ 0.27
TPM3-205ENST00000328159 COBLO75128 1261 aa16.73■□□□□ 0.27
TPM3-205ENST00000328159 AGBL1Q96MI9 1066 aa16.73■□□□□ 0.27
TPM3-205ENST00000328159 WRNIP1Q96S55 665 aa16.73■□□□□ 0.27
TPM3-205ENST00000328159 TANGO6Q9C0B7 1094 aa16.73■□□□□ 0.27
TPM3-205ENST00000328159 AS3MTQ9HBK9 375 aa16.73■□□□□ 0.27
TPM3-205ENST00000328159 PICK1Q9NRD5 415 aa16.73■□□□□ 0.27
TPM3-205ENST00000328159 POLR2AP24928 1970 aaKnown RBP16.73■□□□□ 0.27
TPM3-205ENST00000328159 A0A1B0GTH6 734 aa16.72■□□□□ 0.27
TPM3-205ENST00000328159 PSMA7O14818 248 aa16.72■□□□□ 0.27
TPM3-205ENST00000328159 MSH4O15457 936 aa16.72■□□□□ 0.27
TPM3-205ENST00000328159 VCAM1P19320 739 aa16.72■□□□□ 0.27
TPM3-205ENST00000328159 STAT3P40763 770 aa16.72■□□□□ 0.27
TPM3-205ENST00000328159 CCZ1BP86790 482 aa16.72■□□□□ 0.27
TPM3-205ENST00000328159 CCZ1P86791 482 aaPredicted RBP16.72■□□□□ 0.27
TPM3-205ENST00000328159 SPIRE1Q08AE8 756 aa16.72■□□□□ 0.27
TPM3-205ENST00000328159 SPP2Q13103 211 aa16.72■□□□□ 0.27
TPM3-205ENST00000328159 ARMCX5Q6P1M9 558 aa16.72■□□□□ 0.27
TPM3-205ENST00000328159 CNNM4Q6P4Q7 775 aa16.72■□□□□ 0.27
TPM3-205ENST00000328159 APTXQ7Z2E3 356 aaKnown RBP16.72■□□□□ 0.27
TPM3-205ENST00000328159 ZKSCAN4Q969J2 545 aaPredicted RBP16.72■□□□□ 0.27
TPM3-205ENST00000328159 PARP14Q460N5 1801 aa16.72■□□□□ 0.27
TPM3-205ENST00000328159 IGLV3-22A0A075B6J6 115 aa16.72■□□□□ 0.27
TPM3-205ENST00000328159 PVALEFA0A1B0GWK0 134 aa16.72■□□□□ 0.27
TPM3-205ENST00000328159 NR1I3Q14994 352 aa16.72■□□□□ 0.27
TPM3-205ENST00000328159 UNC13DQ70J99 1090 aa16.72■□□□□ 0.27
TPM3-205ENST00000328159 CYP2W1Q8TAV3 490 aa16.72■□□□□ 0.27
TPM3-205ENST00000328159 DHTKD1Q96HY7 919 aaPredicted RBP16.72■□□□□ 0.27
TPM3-205ENST00000328159 CTAGE1Q96RT6 745 aa16.72■□□□□ 0.27
TPM3-205ENST00000328159 PPP1R9AQ9ULJ8 1098 aa16.72■□□□□ 0.27
TPM3-205ENST00000328159 PHIPQ8WWQ0 1821 aa16.71■□□□□ 0.27
TPM3-205ENST00000328159 FLOT1O75955 427 aa16.71■□□□□ 0.27
TPM3-205ENST00000328159 SKILP12757 684 aa16.71■□□□□ 0.27
TPM3-205ENST00000328159 PTPRAP18433 802 aa16.71■□□□□ 0.27
TPM3-205ENST00000328159 SFPQP23246 707 aaKnown RBP eCLIP16.71■□□□□ 0.27
TPM3-205ENST00000328159 PPP1R2P41236 205 aa16.71■□□□□ 0.27
TPM3-205ENST00000328159 HSD17B4P51659 736 aa16.71■□□□□ 0.27
TPM3-205ENST00000328159 BACE1P56817 501 aa16.71■□□□□ 0.27
TPM3-205ENST00000328159 SPAG1Q07617 926 aa16.71■□□□□ 0.27
TPM3-205ENST00000328159 HAUS3Q68CZ6 603 aa16.71■□□□□ 0.27
TPM3-205ENST00000328159 DYMQ7RTS9 669 aa16.71■□□□□ 0.27
TPM3-205ENST00000328159 ZNF280CQ8ND82 737 aa16.71■□□□□ 0.27
TPM3-205ENST00000328159 RPAP3Q9H6T3 665 aaPredicted RBP16.71■□□□□ 0.27
TPM3-205ENST00000328159 SLC38A10Q9HBR0 1119 aa16.71■□□□□ 0.27
TPM3-205ENST00000328159 LIMA1Q9UHB6 759 aaKnown RBP16.71■□□□□ 0.27
TPM3-205ENST00000328159 FZD1Q9UP38 647 aa16.71■□□□□ 0.27
TPM3-205ENST00000328159 KIAA1024Q9UPX6 916 aa16.71■□□□□ 0.27
TPM3-205ENST00000328159 STK24Q9Y6E0 443 aa16.71■□□□□ 0.27
TPM3-205ENST00000328159 SSC5DA1L4H1 1573 aa16.71■□□□□ 0.26
TPM3-205ENST00000328159 POTEB3A0JP26 581 aa16.7■□□□□ 0.26
TPM3-205ENST00000328159 POTECB2RU33 542 aa16.7■□□□□ 0.26
TPM3-205ENST00000328159 MED24O75448 989 aa16.7■□□□□ 0.26
TPM3-205ENST00000328159 STK4Q13043 487 aa16.7■□□□□ 0.26
TPM3-205ENST00000328159 PTPN21Q16825 1174 aa16.7■□□□□ 0.26
TPM3-205ENST00000328159 COBLL1Q53SF7 1204 aa16.7■□□□□ 0.26
TPM3-205ENST00000328159 NCAPH2Q6IBW4 605 aa16.7■□□□□ 0.26
TPM3-205ENST00000328159 POTEBQ6S5H4 581 aa16.7■□□□□ 0.26
TPM3-205ENST00000328159 ERMNQ8TAM6 284 aa16.7■□□□□ 0.26
TPM3-205ENST00000328159 CLEC4DQ8WXI8 215 aa16.7■□□□□ 0.26
TPM3-205ENST00000328159 RBBP6Q7Z6E9 1792 aaKnown RBP16.7■□□□□ 0.26
TPM3-205ENST00000328159 TRIM49BA6NDI0 452 aa16.69■□□□□ 0.26
TPM3-205ENST00000328159 DDNO94850 711 aaPredicted RBP16.69■□□□□ 0.26
TPM3-205ENST00000328159 FCER1AP12319 257 aa16.69■□□□□ 0.26
TPM3-205ENST00000328159 PMS1P54277 932 aaKnown RBP16.69■□□□□ 0.26
TPM3-205ENST00000328159 UBXN2AP68543 259 aa16.69■□□□□ 0.26
TPM3-205ENST00000328159 TBX2Q13207 712 aaPredicted RBP16.69■□□□□ 0.26
TPM3-205ENST00000328159 SUPT20HL1Q3ZLR7 823 aa16.69■□□□□ 0.26
TPM3-205ENST00000328159 FILIP1LQ4L180 1135 aa16.69■□□□□ 0.26
TPM3-205ENST00000328159 CPXCR1Q8N123 301 aa16.69■□□□□ 0.26
TPM3-205ENST00000328159 DDX12PQ92771 950 aa16.69■□□□□ 0.26
TPM3-205ENST00000328159 KLRG1Q96E93 195 aa16.69■□□□□ 0.26
TPM3-205ENST00000328159 RAVER2Q9HCJ3 691 aaKnown RBP16.69■□□□□ 0.26
TPM3-205ENST00000328159 RNF181Q9P0P0 153 aa16.69■□□□□ 0.26
TPM3-205ENST00000328159 ADD3Q9UEY8 706 aaKnown RBP16.69■□□□□ 0.26
TPM3-205ENST00000328159 VAV3Q9UKW4 847 aa16.69■□□□□ 0.26
TPM3-205ENST00000328159 PITPNM2Q9BZ72 1349 aa16.69■□□□□ 0.26
TPM3-205ENST00000328159 E9PMD0 336 aa16.69■□□□□ 0.26
TPM3-205ENST00000328159 ZBED4O75132 1171 aa16.69■□□□□ 0.26
TPM3-205ENST00000328159 ALAS1P13196 640 aa16.69■□□□□ 0.26
TPM3-205ENST00000328159 GHRHRQ02643 423 aa16.69■□□□□ 0.26
TPM3-205ENST00000328159 KRT31Q15323 416 aa16.69■□□□□ 0.26
TPM3-205ENST00000328159 SPECC1LQ69YQ0 1117 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms