RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 PURBQ96QR8 312 aaKnown RBP11.61□□□□□ -0.55
VIPAS39-201ENST00000327028 KCNMB3Q9NPA1 279 aa11.61□□□□□ -0.55
VIPAS39-201ENST00000327028 DDX49Q9Y6V7 483 aaKnown RBP11.61□□□□□ -0.55
VIPAS39-201ENST00000327028 ZNFX1Q9P2E3 1918 aaKnown RBP11.61□□□□□ -0.55
VIPAS39-201ENST00000327028 DNAJC25-GNG10A0A024R161 153 aa11.6□□□□□ -0.55
VIPAS39-201ENST00000327028 IGLV3-22A0A075B6J6 115 aa11.6□□□□□ -0.55
VIPAS39-201ENST00000327028 CA12O43570 354 aa11.6□□□□□ -0.55
VIPAS39-201ENST00000327028 TRAK2O60296 914 aa11.6□□□□□ -0.55
VIPAS39-201ENST00000327028 CCND2P30279 289 aa11.6□□□□□ -0.55
VIPAS39-201ENST00000327028 MAPK4P31152 587 aa11.6□□□□□ -0.55
VIPAS39-201ENST00000327028 SETQ01105 290 aaPredicted RBP11.6□□□□□ -0.55
VIPAS39-201ENST00000327028 CRHR2Q13324 411 aa11.6□□□□□ -0.55
VIPAS39-201ENST00000327028 KLHL40Q2TBA0 621 aa11.6□□□□□ -0.55
VIPAS39-201ENST00000327028 PRR16Q569H4 304 aa11.6□□□□□ -0.55
VIPAS39-201ENST00000327028 WDR78Q5VTH9 848 aa11.6□□□□□ -0.55
VIPAS39-201ENST00000327028 RESP18Q5W5W9 173 aa11.6□□□□□ -0.55
VIPAS39-201ENST00000327028 NIPA1Q7RTP0 329 aa11.6□□□□□ -0.55
VIPAS39-201ENST00000327028 ABRAQ8N0Z2 381 aa11.6□□□□□ -0.55
VIPAS39-201ENST00000327028 MRPS27Q92552 414 aaKnown RBP11.6□□□□□ -0.55
VIPAS39-201ENST00000327028 TBX3O15119 743 aa11.6□□□□□ -0.55
VIPAS39-201ENST00000327028 CMA1P23946 247 aa11.6□□□□□ -0.55
VIPAS39-201ENST00000327028 CNTN2Q02246 1040 aa11.6□□□□□ -0.55
VIPAS39-201ENST00000327028 GRIN1Q05586 938 aa11.6□□□□□ -0.55
VIPAS39-201ENST00000327028 IL17AQ16552 155 aa11.6□□□□□ -0.55
VIPAS39-201ENST00000327028 CEP55Q53EZ4 464 aa11.6□□□□□ -0.55
VIPAS39-201ENST00000327028 SHC4Q6S5L8 630 aa11.6□□□□□ -0.55
VIPAS39-201ENST00000327028 DTHD1Q6ZMT9 781 aa11.6□□□□□ -0.55
VIPAS39-201ENST00000327028 CCAR1Q8IX12 1150 aaKnown RBP11.6□□□□□ -0.55
VIPAS39-201ENST00000327028 ETNPPLQ8TBG4 499 aa11.6□□□□□ -0.55
VIPAS39-201ENST00000327028 IWS1Q96ST2 819 aa11.6□□□□□ -0.55
VIPAS39-201ENST00000327028 ADD3Q9UEY8 706 aaKnown RBP11.6□□□□□ -0.55
VIPAS39-201ENST00000327028 UBIAD1Q9Y5Z9 338 aa11.6□□□□□ -0.55
VIPAS39-201ENST00000327028 PLXNA1Q9UIW2 1896 aa11.6□□□□□ -0.55
VIPAS39-201ENST00000327028 ASTN1O14525 1302 aa11.6□□□□□ -0.55
VIPAS39-201ENST00000327028 VWA3AA6NCI4 1184 aa11.59□□□□□ -0.55
VIPAS39-201ENST00000327028 NR3C2P08235 984 aa11.59□□□□□ -0.55
VIPAS39-201ENST00000327028 LONP1P36776 959 aaKnown RBP11.59□□□□□ -0.55
VIPAS39-201ENST00000327028 ALDH5A1P51649 535 aaPredicted RBP11.59□□□□□ -0.55
VIPAS39-201ENST00000327028 TPRNQ4KMQ1 711 aa11.59□□□□□ -0.55
VIPAS39-201ENST00000327028 SLFN12Q8IYM2 578 aa11.59□□□□□ -0.55
VIPAS39-201ENST00000327028 FSIP1Q8NA03 581 aa11.59□□□□□ -0.55
VIPAS39-201ENST00000327028 HAS1Q92839 578 aa11.59□□□□□ -0.55
VIPAS39-201ENST00000327028 MXRA8Q9BRK3 442 aa11.59□□□□□ -0.55
VIPAS39-201ENST00000327028 CSRNP2Q9H175 543 aa11.59□□□□□ -0.55
VIPAS39-201ENST00000327028 GOLPH3LQ9H4A5 285 aa11.59□□□□□ -0.55
VIPAS39-201ENST00000327028 FAM237AA0A1B0GTK4 181 aa11.59□□□□□ -0.55
VIPAS39-201ENST00000327028 SOWAHBA6NEL2 793 aa11.59□□□□□ -0.55
VIPAS39-201ENST00000327028 MEIS1O00470 390 aa11.59□□□□□ -0.55
VIPAS39-201ENST00000327028 STRNO43815 780 aa11.59□□□□□ -0.55
VIPAS39-201ENST00000327028 MAP2K2P36507 400 aa11.59□□□□□ -0.55
VIPAS39-201ENST00000327028 FXR2P51116 673 aaKnown RBP eCLIP11.59□□□□□ -0.55
VIPAS39-201ENST00000327028 MRPS9P82933 396 aaKnown RBP11.59□□□□□ -0.55
VIPAS39-201ENST00000327028 CCDC73Q6ZRK6 1079 aa11.59□□□□□ -0.55
VIPAS39-201ENST00000327028 GPR142Q7Z601 462 aa11.59□□□□□ -0.55
VIPAS39-201ENST00000327028 VSIG10LQ86VR7 867 aa11.59□□□□□ -0.55
VIPAS39-201ENST00000327028 PLA2G4DQ86XP0 818 aa11.59□□□□□ -0.55
VIPAS39-201ENST00000327028 IVNS1ABPQ9Y6Y0 642 aa11.59□□□□□ -0.55
VIPAS39-201ENST00000327028 LOC102724159A0A0B4J2E5 919 aa11.58□□□□□ -0.55
VIPAS39-201ENST00000327028 STAM2O75886 525 aa11.58□□□□□ -0.55
VIPAS39-201ENST00000327028 MYCLP12524 364 aaPredicted RBP11.58□□□□□ -0.55
VIPAS39-201ENST00000327028 LIG1P18858 919 aa11.58□□□□□ -0.55
VIPAS39-201ENST00000327028 VEGFBP49765 207 aa11.58□□□□□ -0.55
VIPAS39-201ENST00000327028 PWP2Q15269 919 aaKnown RBP11.58□□□□□ -0.55
VIPAS39-201ENST00000327028 TMEM266Q2M3C6 531 aa11.58□□□□□ -0.55
VIPAS39-201ENST00000327028 PLEKHH3Q7Z736 793 aa11.58□□□□□ -0.55
VIPAS39-201ENST00000327028 CYP2W1Q8TAV3 490 aa11.58□□□□□ -0.55
VIPAS39-201ENST00000327028 FGD4Q96M96 766 aa11.58□□□□□ -0.55
VIPAS39-201ENST00000327028 MSH4O15457 936 aa11.58□□□□□ -0.56
VIPAS39-201ENST00000327028 PGK2P07205 417 aa11.58□□□□□ -0.56
VIPAS39-201ENST00000327028 ITGB5P18084 799 aa11.58□□□□□ -0.56
VIPAS39-201ENST00000327028 EDNRBP24530 442 aa11.58□□□□□ -0.56
VIPAS39-201ENST00000327028 GRB14Q14449 540 aa11.58□□□□□ -0.56
VIPAS39-201ENST00000327028 AK8Q96MA6 479 aa11.58□□□□□ -0.56
VIPAS39-201ENST00000327028 FAM20AQ96MK3 541 aa11.58□□□□□ -0.56
VIPAS39-201ENST00000327028 JADE2Q9NQC1 790 aa11.58□□□□□ -0.56
VIPAS39-201ENST00000327028 HPSEQ9Y251 543 aa11.58□□□□□ -0.56
VIPAS39-201ENST00000327028 B4DLN1 442 aa11.57□□□□□ -0.56
VIPAS39-201ENST00000327028 MARCH6O60337 910 aa11.57□□□□□ -0.56
VIPAS39-201ENST00000327028 PFKFB1P16118 471 aa11.57□□□□□ -0.56
VIPAS39-201ENST00000327028 ADORA2AP29274 412 aa11.57□□□□□ -0.56
VIPAS39-201ENST00000327028 TXKP42681 527 aa11.57□□□□□ -0.56
VIPAS39-201ENST00000327028 FAM160A1Q05DH4 1040 aa11.57□□□□□ -0.56
VIPAS39-201ENST00000327028 SLC5A5Q92911 643 aa11.57□□□□□ -0.56
VIPAS39-201ENST00000327028 GPRASP2Q96D09 838 aa11.57□□□□□ -0.56
VIPAS39-201ENST00000327028 INPP4AQ96PE3 977 aaPredicted RBP11.57□□□□□ -0.56
VIPAS39-201ENST00000327028 MPHOSPH6Q99547 160 aaKnown RBP11.57□□□□□ -0.56
VIPAS39-201ENST00000327028 CFHR5Q9BXR6 569 aa11.57□□□□□ -0.56
VIPAS39-201ENST00000327028 FAM13BQ9NYF5 915 aa11.57□□□□□ -0.56
VIPAS39-201ENST00000327028 MGAMO43451 1857 aa11.57□□□□□ -0.56
VIPAS39-201ENST00000327028 A0A1B0GVL5 298 aa11.57□□□□□ -0.56
VIPAS39-201ENST00000327028 SLC15A5A6NIM6 579 aa11.57□□□□□ -0.56
VIPAS39-201ENST00000327028 IGSF22Q8N9C0 903 aa11.57□□□□□ -0.56
VIPAS39-201ENST00000327028 ENGASEQ8NFI3 743 aa11.57□□□□□ -0.56
VIPAS39-201ENST00000327028 SYMPKQ92797 1274 aaKnown RBP11.57□□□□□ -0.56
VIPAS39-201ENST00000327028 ZFP91Q96JP5 570 aaPredicted RBP11.57□□□□□ -0.56
VIPAS39-201ENST00000327028 RAB34Q9BZG1 259 aa11.57□□□□□ -0.56
VIPAS39-201ENST00000327028 ARP10275 920 aa11.56□□□□□ -0.56
VIPAS39-201ENST00000327028 NDUFA8P51970 172 aa11.56□□□□□ -0.56
VIPAS39-201ENST00000327028 HTRA3P83110 453 aa11.56□□□□□ -0.56
VIPAS39-201ENST00000327028 MTMR1Q13613 665 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms