RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 GARSP41250 739 aaKnown RBP8.57□□□□□ -1.04
CIITA-201ENST00000324288 TRIM58Q8NG06 486 aa8.57□□□□□ -1.04
CIITA-201ENST00000324288 BRWD1Q9NSI6 2320 aa8.57□□□□□ -1.04
CIITA-201ENST00000324288 CPP00450 1065 aa8.57□□□□□ -1.04
CIITA-201ENST00000324288 ARPP19P56211 112 aa8.57□□□□□ -1.04
CIITA-201ENST00000324288 PDE1BQ01064 536 aa8.57□□□□□ -1.04
CIITA-201ENST00000324288 POLA2Q14181 598 aa8.57□□□□□ -1.04
CIITA-201ENST00000324288 SPICE1Q8N0Z3 855 aa8.57□□□□□ -1.04
CIITA-201ENST00000324288 PTH1RQ03431 593 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 FAM98CQ17RN3 349 aaKnown RBP8.56□□□□□ -1.04
CIITA-201ENST00000324288 BBS9Q3SYG4 887 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 RPGRIP1Q96KN7 1286 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 FTCDO95954 541 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 MT-ND3P03897 115 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 MAGEA9P43362 315 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 SDR42E1Q8WUS8 393 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 APPBP2Q92624 585 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 DDX28Q9NUL7 540 aaKnown RBP8.56□□□□□ -1.04
CIITA-201ENST00000324288 ITSN2Q9NZM3 1697 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 MYO1CO00159 1063 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 PPIP5K2O43314 1243 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 YWHAEP62258 255 aaKnown RBP8.56□□□□□ -1.04
CIITA-201ENST00000324288 ATP6V1E2Q96A05 226 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 ZCCHC17Q9NP64 241 aaKnown RBP8.56□□□□□ -1.04
CIITA-201ENST00000324288 H0YIN7 160 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 TRPV6Q9H1D0 765 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 RIMS2Q9UQ26 1411 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 A0A0G2JND7 137 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 A1BGP04217 495 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 EYA1Q99502 592 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 METTL22Q9BUU2 404 aaPredicted RBP8.56□□□□□ -1.04
CIITA-201ENST00000324288 PCDHA7Q9UN72 937 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 TRPM2O94759 1503 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 E7EWF7 191 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 HNRNPCP07910 306 aaKnown RBP eCLIP8.56□□□□□ -1.04
CIITA-201ENST00000324288 STAT1P42224 750 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 STX1BP61266 288 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 SPOPLQ6IQ16 392 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 SZRD1Q7Z422 152 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 SUCLA2Q9P2R7 463 aaPredicted RBP8.56□□□□□ -1.04
CIITA-201ENST00000324288 XPAP23025 273 aaPredicted RBP8.56□□□□□ -1.04
CIITA-201ENST00000324288 CACNB1Q02641 598 aaPredicted RBP8.56□□□□□ -1.04
CIITA-201ENST00000324288 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.56□□□□□ -1.04
CIITA-201ENST00000324288 LRRN2O75325 713 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 GFPT2O94808 682 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 NR1D1P20393 614 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 PPARAQ07869 468 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 MFSD14BQ5SR56 506 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 C1orf146Q5VVC0 180 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 DCAF5Q96JK2 942 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 IBTKQ9P2D0 1353 aaPredicted RBP8.56□□□□□ -1.04
CIITA-201ENST00000324288 BRD1O95696 1058 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 CCDC159P0C7I6 412 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 DEUP1Q05D60 604 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 MAP7D3Q8IWC1 876 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 MYOCDQ8IZQ8 938 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 KIAA0100Q14667 2235 aaKnown RBP8.56□□□□□ -1.04
CIITA-201ENST00000324288 PNMA6EA0A0J9YXQ4 647 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 GOLGA8SH3BPF8 625 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 HSPA2P54652 639 aa8.56□□□□□ -1.04
CIITA-201ENST00000324288 SPDYE1Q8NFV5 336 aaPredicted RBP8.56□□□□□ -1.04
CIITA-201ENST00000324288 GTPBP10A4D1E9 387 aaKnown RBP8.55□□□□□ -1.04
CIITA-201ENST00000324288 KDM1AO60341 852 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 PARP9Q8IXQ6 854 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 EXOC4Q96A65 974 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 FLT4P35916 1363 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 BNIP3LO60238 219 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 SRGAP2O75044 1071 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 KITP10721 976 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 GTF2IP78347 998 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 CCDC85BQ15834 202 aaPredicted RBP8.55□□□□□ -1.04
CIITA-201ENST00000324288 RINT1Q6NUQ1 792 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 TPCN1Q9ULQ1 816 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 BLVRAP53004 296 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 MYL7Q01449 175 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 SNRNP27Q8WVK2 155 aaKnown RBP8.55□□□□□ -1.04
CIITA-201ENST00000324288 EFHD1Q9BUP0 239 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 PSTPIP2Q9H939 334 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 ANAPC5Q9UJX4 755 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 HOXC9P31274 260 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 POLGP54098 1239 aaPredicted RBP8.55□□□□□ -1.04
CIITA-201ENST00000324288 IQCB1Q15051 598 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 FAM178BQ8IXR5 827 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 PACSIN2Q9UNF0 486 aaPredicted RBP8.55□□□□□ -1.04
CIITA-201ENST00000324288 A6NJR5 290 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 HACD3Q9P035 362 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 TRAF3IP3Q9Y228 551 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 DDIT3P35638 169 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 TCIRG1Q13488 830 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 C10orf76Q5T2E6 689 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 HACE1Q8IYU2 909 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 KCNA4P22459 653 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 NBPF10Q6P3W6 841 aaKnown RBP8.55□□□□□ -1.04
CIITA-201ENST00000324288 NCAPG2Q86XI2 1143 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 FAM186BQ8IYM0 893 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 MARCH10Q8NA82 808 aaPredicted RBP8.55□□□□□ -1.04
CIITA-201ENST00000324288 TDRD7Q8NHU6 1098 aaKnown RBP8.55□□□□□ -1.04
CIITA-201ENST00000324288 MAIP1Q8WWC4 291 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 LGR6Q9HBX8 967 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 TRIM66O15016 1216 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms