RNA–Protein interactions for RNA: ENST00000324266.9

TRAPPC12-201, Transcript of trafficking protein particle complex 12, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAPPC12, Length 2,508 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-201ENST00000324266 SCN7AQ01118 1682 aa20.03■□□□□ 0.8
TRAPPC12-201ENST00000324266 SKAP2O75563 359 aaPredicted RBP20.03■□□□□ 0.8
TRAPPC12-201ENST00000324266 HIBADHP31937 336 aaKnown RBP20.03■□□□□ 0.8
TRAPPC12-201ENST00000324266 TXNRD1Q16881 649 aa20.03■□□□□ 0.8
TRAPPC12-201ENST00000324266 SBK1Q52WX2 424 aa20.03■□□□□ 0.8
TRAPPC12-201ENST00000324266 CEP85LQ5SZL2 805 aa20.03■□□□□ 0.8
TRAPPC12-201ENST00000324266 TXNRD3Q86VQ6 643 aa20.03■□□□□ 0.8
TRAPPC12-201ENST00000324266 P2RX5Q93086 422 aa20.03■□□□□ 0.8
TRAPPC12-201ENST00000324266 KIAA0754O94854 1291 aa20.03■□□□□ 0.8
TRAPPC12-201ENST00000324266 IDEP14735 1019 aa20.03■□□□□ 0.8
TRAPPC12-201ENST00000324266 ACTN3Q08043 901 aaPredicted RBP20.03■□□□□ 0.8
TRAPPC12-201ENST00000324266 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.03■□□□□ 0.8
TRAPPC12-201ENST00000324266 KRT27Q7Z3Y8 459 aa20.03■□□□□ 0.8
TRAPPC12-201ENST00000324266 CABP7Q86V35 215 aa20.03■□□□□ 0.8
TRAPPC12-201ENST00000324266 SLC44A5Q8NCS7 719 aa20.03■□□□□ 0.8
TRAPPC12-201ENST00000324266 NOC4LQ9BVI4 516 aaKnown RBP20.03■□□□□ 0.8
TRAPPC12-201ENST00000324266 DDX20Q9UHI6 824 aaKnown RBP20.03■□□□□ 0.8
TRAPPC12-201ENST00000324266 ZNF652Q9Y2D9 606 aa20.03■□□□□ 0.8
TRAPPC12-201ENST00000324266 LAMB2P55268 1798 aa20.02■□□□□ 0.8
TRAPPC12-201ENST00000324266 STXBP3O00186 592 aa20.02■□□□□ 0.8
TRAPPC12-201ENST00000324266 ZNF263O14978 683 aa20.02■□□□□ 0.8
TRAPPC12-201ENST00000324266 ASIC1P78348 528 aa20.02■□□□□ 0.8
TRAPPC12-201ENST00000324266 MIIPQ5JXC2 388 aa20.02■□□□□ 0.8
TRAPPC12-201ENST00000324266 PARD3BQ8TEW8 1205 aa20.02■□□□□ 0.8
TRAPPC12-201ENST00000324266 DHTKD1Q96HY7 919 aaPredicted RBP20.02■□□□□ 0.8
TRAPPC12-201ENST00000324266 LRWD1Q9UFC0 647 aa20.02■□□□□ 0.8
TRAPPC12-201ENST00000324266 FLT1P17948 1338 aa20.02■□□□□ 0.8
TRAPPC12-201ENST00000324266 CCNE1P24864 410 aa20.02■□□□□ 0.79
TRAPPC12-201ENST00000324266 RPS6KA3P51812 740 aa20.02■□□□□ 0.79
TRAPPC12-201ENST00000324266 MRPS25P82663 173 aaKnown RBP20.02■□□□□ 0.79
TRAPPC12-201ENST00000324266 ZBED6P86452 979 aa20.02■□□□□ 0.79
TRAPPC12-201ENST00000324266 GRM4Q14833 912 aa20.02■□□□□ 0.79
TRAPPC12-201ENST00000324266 LETM2Q2VYF4 491 aa20.02■□□□□ 0.79
TRAPPC12-201ENST00000324266 TLDC1Q6P9B6 456 aa20.02■□□□□ 0.79
TRAPPC12-201ENST00000324266 TRIM9Q9C026 710 aa20.02■□□□□ 0.79
TRAPPC12-201ENST00000324266 ZC3H4Q9UPT8 1303 aaKnown RBP20.01■□□□□ 0.79
TRAPPC12-201ENST00000324266 CKAP4Q07065 602 aaKnown RBP20.01■□□□□ 0.79
TRAPPC12-201ENST00000324266 NAA25Q14CX7 972 aa20.01■□□□□ 0.79
TRAPPC12-201ENST00000324266 DGKHQ86XP1 1220 aa20.01■□□□□ 0.79
TRAPPC12-201ENST00000324266 EHBP1Q8NDI1 1231 aa20.01■□□□□ 0.79
TRAPPC12-201ENST00000324266 FAM76AQ8TAV0 307 aa20.01■□□□□ 0.79
TRAPPC12-201ENST00000324266 MKNK2Q9HBH9 465 aa20.01■□□□□ 0.79
TRAPPC12-201ENST00000324266 STX8Q9UNK0 236 aa20.01■□□□□ 0.79
TRAPPC12-201ENST00000324266 LAMB1P07942 1786 aa20.01■□□□□ 0.79
TRAPPC12-201ENST00000324266 NOC3LQ8WTT2 800 aaKnown RBP20.01■□□□□ 0.79
TRAPPC12-201ENST00000324266 COG1Q8WTW3 980 aa20.01■□□□□ 0.79
TRAPPC12-201ENST00000324266 EHD4Q9H223 541 aa20.01■□□□□ 0.79
TRAPPC12-201ENST00000324266 BARHL2Q9NY43 387 aa20.01■□□□□ 0.79
TRAPPC12-201ENST00000324266 RGS17Q9UGC6 210 aaPredicted RBP20.01■□□□□ 0.79
TRAPPC12-201ENST00000324266 SAMM50Q9Y512 469 aa20.01■□□□□ 0.79
TRAPPC12-201ENST00000324266 EIF3HO15372 352 aaKnown RBP eCLIP20■□□□□ 0.791e-9■■■□□ 16.5
TRAPPC12-201ENST00000324266 CCNT1O60563 726 aaKnown RBP20■□□□□ 0.79
TRAPPC12-201ENST00000324266 GGCXP38435 758 aa20■□□□□ 0.79
TRAPPC12-201ENST00000324266 C12orf60Q5U649 245 aa20■□□□□ 0.79
TRAPPC12-201ENST00000324266 SLC51AQ86UW1 340 aa20■□□□□ 0.79
TRAPPC12-201ENST00000324266 DZIP1Q86YF9 867 aaKnown RBP20■□□□□ 0.79
TRAPPC12-201ENST00000324266 NUP58Q9BVL2 599 aa20■□□□□ 0.79
TRAPPC12-201ENST00000324266 RABEP2Q9H5N1 569 aa20■□□□□ 0.79
TRAPPC12-201ENST00000324266 KIAA1551Q9HCM1 1747 aa20■□□□□ 0.79
TRAPPC12-201ENST00000324266 MYL1P05976 194 aa20■□□□□ 0.79
TRAPPC12-201ENST00000324266 TECP42680 631 aa20■□□□□ 0.79
TRAPPC12-201ENST00000324266 SMTNP53814 917 aa20■□□□□ 0.79
TRAPPC12-201ENST00000324266 RPS8P62241 208 aaKnown RBP20■□□□□ 0.79
TRAPPC12-201ENST00000324266 KIF5AQ12840 1032 aa20■□□□□ 0.79
TRAPPC12-201ENST00000324266 EZH2Q15910 746 aaKnown RBP20■□□□□ 0.79
TRAPPC12-201ENST00000324266 CCDC96Q2M329 555 aa20■□□□□ 0.79
TRAPPC12-201ENST00000324266 ZNF662Q6ZS27 426 aa20■□□□□ 0.79
TRAPPC12-201ENST00000324266 CCDC170Q8IYT3 715 aa20■□□□□ 0.79
TRAPPC12-201ENST00000324266 KIRREL3Q8IZU9 778 aa20■□□□□ 0.79
TRAPPC12-201ENST00000324266 SELENOOQ9BVL4 669 aa20■□□□□ 0.79
TRAPPC12-201ENST00000324266 MLXIPQ9HAP2 919 aa20■□□□□ 0.79
TRAPPC12-201ENST00000324266 TCP11L1Q9NUJ3 509 aa20■□□□□ 0.79
TRAPPC12-201ENST00000324266 BRWD3Q6RI45 1802 aa19.99■□□□□ 0.79
TRAPPC12-201ENST00000324266 TARSL2A2RTX5 802 aaKnown RBP19.99■□□□□ 0.79
TRAPPC12-201ENST00000324266 EPHB6O15197 1021 aa19.99■□□□□ 0.79
TRAPPC12-201ENST00000324266 COQ9O75208 318 aa19.99■□□□□ 0.79
TRAPPC12-201ENST00000324266 TSPY3P0CV98 308 aa19.99■□□□□ 0.79
TRAPPC12-201ENST00000324266 TSPY8P0CW00 308 aa19.99■□□□□ 0.79
TRAPPC12-201ENST00000324266 PPFIA1Q13136 1202 aa19.99■□□□□ 0.79
TRAPPC12-201ENST00000324266 CCNI2Q6ZMN8 369 aaPredicted RBP19.99■□□□□ 0.79
TRAPPC12-201ENST00000324266 B4GALNT4Q76KP1 1039 aa19.99■□□□□ 0.79
TRAPPC12-201ENST00000324266 SH3RF3Q8TEJ3 882 aaPredicted RBP19.99■□□□□ 0.79
TRAPPC12-201ENST00000324266 CCDC42Q96M95 316 aa19.99■□□□□ 0.79
TRAPPC12-201ENST00000324266 SLC39A2Q9NP94 309 aa19.99■□□□□ 0.79
TRAPPC12-201ENST00000324266 CAPN6Q9Y6Q1 641 aa19.99■□□□□ 0.79
TRAPPC12-201ENST00000324266 GRIN2DO15399 1336 aa19.99■□□□□ 0.79
TRAPPC12-201ENST00000324266 BICDL2A1A5D9 508 aa19.99■□□□□ 0.79
TRAPPC12-201ENST00000324266 MEFVO15553 781 aaPredicted RBP19.99■□□□□ 0.79
TRAPPC12-201ENST00000324266 MCM3P25205 808 aa19.99■□□□□ 0.79
TRAPPC12-201ENST00000324266 VAV2P52735 878 aa19.99■□□□□ 0.79
TRAPPC12-201ENST00000324266 CEP57Q86XR8 500 aa19.99■□□□□ 0.79
TRAPPC12-201ENST00000324266 HDAC7Q8WUI4 952 aa19.99■□□□□ 0.79
TRAPPC12-201ENST00000324266 PURBQ96QR8 312 aaKnown RBP19.99■□□□□ 0.79
TRAPPC12-201ENST00000324266 PSMB7Q99436 277 aa19.99■□□□□ 0.79
TRAPPC12-201ENST00000324266 MYH10P35580 1976 aa19.99■□□□□ 0.79
TRAPPC12-201ENST00000324266 BTAF1O14981 1849 aa19.98■□□□□ 0.79
TRAPPC12-201ENST00000324266 RASSF9O75901 435 aa19.98■□□□□ 0.79
TRAPPC12-201ENST00000324266 OR52Z1P0C646 297 aa19.98■□□□□ 0.79
TRAPPC12-201ENST00000324266 EZRP15311 586 aaKnown RBP19.98■□□□□ 0.79
TRAPPC12-201ENST00000324266 PSMD2Q13200 908 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms