RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 GH1P01241 217 aa23.02■■□□□ 1.28
SSNA1-201ENST00000322310 SSTR3P32745 418 aaPredicted RBP23.02■■□□□ 1.28
SSNA1-201ENST00000322310 ZNF543Q08ER8 600 aa23.02■■□□□ 1.28
SSNA1-201ENST00000322310 CRBNQ96SW2 442 aa23.02■■□□□ 1.28
SSNA1-201ENST00000322310 C17orf80Q9BSJ5 609 aa23.02■■□□□ 1.28
SSNA1-201ENST00000322310 HDAC6Q9UBN7 1215 aa23.02■■□□□ 1.28
SSNA1-201ENST00000322310 GTF2IRD1Q9UHL9 959 aa23.02■■□□□ 1.28
SSNA1-201ENST00000322310 PNMA2Q9UL42 364 aa23.02■■□□□ 1.28
SSNA1-201ENST00000322310 SIP14410 1827 aa23.01■■□□□ 1.27
SSNA1-201ENST00000322310 B4DLN1 442 aa23.01■■□□□ 1.27
SSNA1-201ENST00000322310 MRPL12P52815 198 aaKnown RBP23.01■■□□□ 1.27
SSNA1-201ENST00000322310 TBC1D5Q92609 795 aa23.01■■□□□ 1.27
SSNA1-201ENST00000322310 WNT8BQ93098 351 aa23.01■■□□□ 1.27
SSNA1-201ENST00000322310 UIMC1Q96RL1 719 aa23.01■■□□□ 1.27
SSNA1-201ENST00000322310 ALG1Q9BT22 464 aa23.01■■□□□ 1.27
SSNA1-201ENST00000322310 CPVLQ9H3G5 476 aa23.01■■□□□ 1.27
SSNA1-201ENST00000322310 PARNO95453 639 aaKnown RBP23■■□□□ 1.27
SSNA1-201ENST00000322310 CASTP20810 708 aaKnown RBP23■■□□□ 1.27
SSNA1-201ENST00000322310 IKBKEQ14164 716 aa23■■□□□ 1.27
SSNA1-201ENST00000322310 MBTPS1Q14703 1052 aa23■■□□□ 1.27
SSNA1-201ENST00000322310 PTCRAQ6ISU1 281 aaPredicted RBP23■■□□□ 1.27
SSNA1-201ENST00000322310 TRAF7Q6Q0C0 670 aa23■■□□□ 1.27
SSNA1-201ENST00000322310 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23■■□□□ 1.27
SSNA1-201ENST00000322310 C7orf31Q8N865 590 aa23■■□□□ 1.27
SSNA1-201ENST00000322310 TAAR1Q96RJ0 339 aa23■■□□□ 1.27
SSNA1-201ENST00000322310 TCP11L1Q9NUJ3 509 aa23■■□□□ 1.27
SSNA1-201ENST00000322310 COL20A1Q9P218 1284 aa23■■□□□ 1.27
SSNA1-201ENST00000322310 ZNF286BP0CG31 522 aa22.99■■□□□ 1.27
SSNA1-201ENST00000322310 GOLGA8HP0CJ92 632 aa22.99■■□□□ 1.27
SSNA1-201ENST00000322310 PSEN2P49810 448 aa22.99■■□□□ 1.27
SSNA1-201ENST00000322310 DGKDQ16760 1214 aa22.99■■□□□ 1.27
SSNA1-201ENST00000322310 TRIM71Q2Q1W2 868 aaKnown RBP22.99■■□□□ 1.27
SSNA1-201ENST00000322310 ZNF618Q5T7W0 954 aa22.99■■□□□ 1.27
SSNA1-201ENST00000322310 FBXO22Q8NEZ5 403 aa22.99■■□□□ 1.27
SSNA1-201ENST00000322310 FGAP02671 866 aa22.98■■□□□ 1.27
SSNA1-201ENST00000322310 SNHG28P0DPA3 235 aa22.98■■□□□ 1.27
SSNA1-201ENST00000322310 ZNF200P98182 395 aaPredicted RBP22.98■■□□□ 1.27
SSNA1-201ENST00000322310 ALX1Q15699 326 aa22.98■■□□□ 1.27
SSNA1-201ENST00000322310 RGS22Q8NE09 1264 aa22.98■■□□□ 1.27
SSNA1-201ENST00000322310 SYTL5Q8TDW5 730 aaPredicted RBP22.98■■□□□ 1.27
SSNA1-201ENST00000322310 GRXCR2A6NFK2 248 aa22.97■■□□□ 1.27
SSNA1-201ENST00000322310 H3BQ06 376 aaPredicted RBP22.97■■□□□ 1.27
SSNA1-201ENST00000322310 EFCAB14O75071 495 aa22.97■■□□□ 1.27
SSNA1-201ENST00000322310 MX1P20591 662 aa22.97■■□□□ 1.27
SSNA1-201ENST00000322310 HAND2P61296 217 aa22.97■■□□□ 1.27
SSNA1-201ENST00000322310 PTK7Q13308 1070 aa22.97■■□□□ 1.27
SSNA1-201ENST00000322310 MFSD10Q14728 455 aa22.97■■□□□ 1.27
SSNA1-201ENST00000322310 KIAA0753Q2KHM9 967 aa22.97■■□□□ 1.27
SSNA1-201ENST00000322310 UBA5Q9GZZ9 404 aa22.97■■□□□ 1.27
SSNA1-201ENST00000322310 HIC1Q14526 733 aa22.96■■□□□ 1.27
SSNA1-201ENST00000322310 NSUN6Q8TEA1 469 aaKnown RBP22.96■■□□□ 1.27
SSNA1-201ENST00000322310 DDX41Q9UJV9 622 aaKnown RBP22.96■■□□□ 1.27
SSNA1-201ENST00000322310 INSL6Q9Y581 213 aa22.96■■□□□ 1.27
SSNA1-201ENST00000322310 LGR5O75473 907 aa22.95■■□□□ 1.26
SSNA1-201ENST00000322310 F2P00734 622 aa22.95■■□□□ 1.26
SSNA1-201ENST00000322310 ALADP13716 330 aa22.95■■□□□ 1.26
SSNA1-201ENST00000322310 STXBP2Q15833 593 aa22.95■■□□□ 1.26
SSNA1-201ENST00000322310 CSPP1Q1MSJ5 1256 aa22.95■■□□□ 1.26
SSNA1-201ENST00000322310 MYOCDQ8IZQ8 938 aa22.95■■□□□ 1.26
SSNA1-201ENST00000322310 MRPL38Q96DV4 380 aaKnown RBP22.95■■□□□ 1.26
SSNA1-201ENST00000322310 TTC14Q96N46 770 aa22.95■■□□□ 1.26
SSNA1-201ENST00000322310 RMDN3Q96TC7 470 aa22.95■■□□□ 1.26
SSNA1-201ENST00000322310 KATNAL1Q9BW62 490 aa22.95■■□□□ 1.26
SSNA1-201ENST00000322310 HAS3O00219 553 aa22.94■■□□□ 1.26
SSNA1-201ENST00000322310 MRE11P49959 708 aa22.94■■□□□ 1.26
SSNA1-201ENST00000322310 MKRN4PQ13434 485 aaPredicted RBP22.94■■□□□ 1.26
SSNA1-201ENST00000322310 CDC37Q16543 378 aaPredicted RBP22.94■■□□□ 1.26
SSNA1-201ENST00000322310 DBF4BQ8NFT6 615 aa22.94■■□□□ 1.26
SSNA1-201ENST00000322310 NEK9Q8TD19 979 aa22.94■■□□□ 1.26
SSNA1-201ENST00000322310 FAM227BQ96M60 508 aa22.94■■□□□ 1.26
SSNA1-201ENST00000322310 ZKSCAN3Q9BRR0 538 aa22.94■■□□□ 1.26
SSNA1-201ENST00000322310 A0A0D9SFI3 127 aa22.93■■□□□ 1.26
SSNA1-201ENST00000322310 AMHP03971 560 aa22.93■■□□□ 1.26
SSNA1-201ENST00000322310 EIF2AK2P19525 551 aaKnown RBP22.93■■□□□ 1.26
SSNA1-201ENST00000322310 HTRA4P83105 476 aaPredicted RBP22.93■■□□□ 1.26
SSNA1-201ENST00000322310 EPC2Q52LR7 807 aa22.93■■□□□ 1.26
SSNA1-201ENST00000322310 GPATCH4Q5T3I0 446 aaKnown RBP22.93■■□□□ 1.26
SSNA1-201ENST00000322310 PPTC7Q8NI37 304 aa22.93■■□□□ 1.26
SSNA1-201ENST00000322310 SP7Q8TDD2 431 aaPredicted RBP22.93■■□□□ 1.26
SSNA1-201ENST00000322310 EMID1Q96A84 441 aaPredicted RBP22.93■■□□□ 1.26
SSNA1-201ENST00000322310 IWS1Q96ST2 819 aa22.93■■□□□ 1.26
SSNA1-201ENST00000322310 HELLSQ9NRZ9 838 aa22.93■■□□□ 1.26
SSNA1-201ENST00000322310 MRVI1Q9Y6F6 885 aa22.93■■□□□ 1.26
SSNA1-201ENST00000322310 WDFY4Q6ZS81 3184 aa22.93■■□□□ 1.26
SSNA1-201ENST00000322310 KIAA1217Q5T5P2 1943 aa22.92■■□□□ 1.26
SSNA1-201ENST00000322310 ABCB11O95342 1321 aa22.92■■□□□ 1.26
SSNA1-201ENST00000322310 SALL3Q9BXA9 1300 aa22.92■■□□□ 1.26
SSNA1-201ENST00000322310 DCXO43602 365 aa22.92■■□□□ 1.26
SSNA1-201ENST00000322310 SORBS3O60504 671 aa22.92■■□□□ 1.26
SSNA1-201ENST00000322310 ARHGEF16Q5VV41 709 aa22.92■■□□□ 1.26
SSNA1-201ENST00000322310 EP400NLQ6ZTU2 488 aa22.92■■□□□ 1.26
SSNA1-201ENST00000322310 TBC1D10CQ8IV04 446 aa22.92■■□□□ 1.26
SSNA1-201ENST00000322310 DHX37Q8IY37 1157 aaKnown RBP22.92■■□□□ 1.26
SSNA1-201ENST00000322310 HSPD1P10809 573 aaKnown RBP22.91■■□□□ 1.26
SSNA1-201ENST00000322310 THPOP40225 353 aa22.91■■□□□ 1.26
SSNA1-201ENST00000322310 NHLH1Q02575 133 aa22.91■■□□□ 1.26
SSNA1-201ENST00000322310 LAMC2Q13753 1193 aa22.91■■□□□ 1.26
SSNA1-201ENST00000322310 PTPROQ16827 1216 aa22.91■■□□□ 1.26
SSNA1-201ENST00000322310 PUS10Q3MIT2 529 aaKnown RBP22.91■■□□□ 1.26
SSNA1-201ENST00000322310 MFSD6Q6ZSS7 791 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms