RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 DHTKD1Q96HY7 919 aaPredicted RBP20.56■□□□□ 0.88
CCDC43-201ENST00000315286 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.56■□□□□ 0.88
CCDC43-201ENST00000315286 KCNJ6P48051 423 aa20.55■□□□□ 0.88
CCDC43-201ENST00000315286 ADKP55263 362 aaKnown RBP20.55■□□□□ 0.88
CCDC43-201ENST00000315286 HYIQ5T013 277 aa20.55■□□□□ 0.88
CCDC43-201ENST00000315286 TTI2Q6NXR4 508 aa20.55■□□□□ 0.88
CCDC43-201ENST00000315286 FAM160B2Q86V87 743 aa20.55■□□□□ 0.88
CCDC43-201ENST00000315286 FCHSD1Q86WN1 690 aa20.55■□□□□ 0.88
CCDC43-201ENST00000315286 CREBRFQ8IUR6 639 aa20.55■□□□□ 0.88
CCDC43-201ENST00000315286 ZNF341Q9BYN7 854 aa20.55■□□□□ 0.88
CCDC43-201ENST00000315286 FEM1BQ9UK73 627 aa20.55■□□□□ 0.88
CCDC43-201ENST00000315286 UQCRHLA0A096LP55 91 aa20.55■□□□□ 0.88
CCDC43-201ENST00000315286 CFBP00751 764 aa20.55■□□□□ 0.88
CCDC43-201ENST00000315286 UQCRHP07919 91 aa20.55■□□□□ 0.88
CCDC43-201ENST00000315286 CIITAP33076 1130 aa20.55■□□□□ 0.88
CCDC43-201ENST00000315286 STAT3P40763 770 aa20.55■□□□□ 0.88
CCDC43-201ENST00000315286 PTGER2P43116 358 aa20.55■□□□□ 0.88
CCDC43-201ENST00000315286 COPB1P53618 953 aaKnown RBP20.55■□□□□ 0.88
CCDC43-201ENST00000315286 CNNM4Q6P4Q7 775 aa20.55■□□□□ 0.88
CCDC43-201ENST00000315286 UNC13DQ70J99 1090 aa20.55■□□□□ 0.88
CCDC43-201ENST00000315286 TMEM139Q8IV31 216 aa20.55■□□□□ 0.88
CCDC43-201ENST00000315286 KIAA0895Q8NCT3 520 aa20.55■□□□□ 0.88
CCDC43-201ENST00000315286 VPS16Q9H269 839 aa20.55■□□□□ 0.88
CCDC43-201ENST00000315286 TAB2Q9NYJ8 693 aa20.55■□□□□ 0.88
CCDC43-201ENST00000315286 PVALEFA0A1B0GWK0 134 aa20.54■□□□□ 0.88
CCDC43-201ENST00000315286 N4BP3O15049 544 aa20.54■□□□□ 0.88
CCDC43-201ENST00000315286 NYAP1Q6ZVC0 841 aa20.54■□□□□ 0.88
CCDC43-201ENST00000315286 FEZ1Q99689 392 aa20.54■□□□□ 0.88
CCDC43-201ENST00000315286 SRRTQ9BXP5 876 aaKnown RBP20.54■□□□□ 0.88
CCDC43-201ENST00000315286 HACL1Q9UJ83 578 aa20.54■□□□□ 0.88
CCDC43-201ENST00000315286 PSDA5PKW4 1024 aaPredicted RBP20.54■□□□□ 0.88
CCDC43-201ENST00000315286 TBX3O15119 743 aa20.54■□□□□ 0.88
CCDC43-201ENST00000315286 INPP5BP32019 993 aa20.54■□□□□ 0.88
CCDC43-201ENST00000315286 SPIRE1Q08AE8 756 aa20.54■□□□□ 0.88
CCDC43-201ENST00000315286 ANKRD20A12PQ8NF67 263 aa20.54■□□□□ 0.88
CCDC43-201ENST00000315286 CYP2W1Q8TAV3 490 aa20.54■□□□□ 0.88
CCDC43-201ENST00000315286 DDX12PQ92771 950 aa20.54■□□□□ 0.88
CCDC43-201ENST00000315286 P2RX5Q93086 422 aa20.54■□□□□ 0.88
CCDC43-201ENST00000315286 TRIM47Q96LD4 638 aa20.54■□□□□ 0.88
CCDC43-201ENST00000315286 DUSP9Q99956 384 aaKnown RBP20.54■□□□□ 0.88
CCDC43-201ENST00000315286 GTPBP4Q9BZE4 634 aaKnown RBP20.54■□□□□ 0.88
CCDC43-201ENST00000315286 NT5C3AQ9H0P0 336 aa20.54■□□□□ 0.88
CCDC43-201ENST00000315286 SLC39A2Q9NP94 309 aa20.54■□□□□ 0.88
CCDC43-201ENST00000315286 KIAA1024Q9UPX6 916 aa20.54■□□□□ 0.88
CCDC43-201ENST00000315286 KDM3AQ9Y4C1 1321 aa20.53■□□□□ 0.88
CCDC43-201ENST00000315286 CYP3A4P08684 503 aa20.53■□□□□ 0.88
CCDC43-201ENST00000315286 CCNE1P24864 410 aa20.53■□□□□ 0.88
CCDC43-201ENST00000315286 NLGN2Q8NFZ4 835 aa20.53■□□□□ 0.88
CCDC43-201ENST00000315286 LRRC27Q9C0I9 530 aa20.53■□□□□ 0.88
CCDC43-201ENST00000315286 DEFB129Q9H1M3 183 aa20.53■□□□□ 0.88
CCDC43-201ENST00000315286 PTPN14Q15678 1187 aa20.52■□□□□ 0.88
CCDC43-201ENST00000315286 COBLL1Q53SF7 1204 aa20.52■□□□□ 0.88
CCDC43-201ENST00000315286 ANKRD40Q6AI12 368 aa20.52■□□□□ 0.88
CCDC43-201ENST00000315286 MYRIPQ8NFW9 859 aa20.52■□□□□ 0.88
CCDC43-201ENST00000315286 THAP9Q9H5L6 903 aa20.52■□□□□ 0.88
CCDC43-201ENST00000315286 POTEB3A0JP26 581 aa20.52■□□□□ 0.87
CCDC43-201ENST00000315286 POTECB2RU33 542 aa20.52■□□□□ 0.87
CCDC43-201ENST00000315286 E9PMD0 336 aa20.52■□□□□ 0.87
CCDC43-201ENST00000315286 GCOM1H8Y6P7 765 aaPredicted RBP20.52■□□□□ 0.87
CCDC43-201ENST00000315286 MSH4O15457 936 aa20.52■□□□□ 0.87
CCDC43-201ENST00000315286 MED24O75448 989 aa20.52■□□□□ 0.87
CCDC43-201ENST00000315286 POLR2MP0CAP2 368 aa20.52■□□□□ 0.87
CCDC43-201ENST00000315286 IDEP14735 1019 aa20.52■□□□□ 0.87
CCDC43-201ENST00000315286 RBL2Q08999 1139 aa20.52■□□□□ 0.87
CCDC43-201ENST00000315286 POTEBQ6S5H4 581 aa20.52■□□□□ 0.87
CCDC43-201ENST00000315286 LDHDQ86WU2 507 aa20.52■□□□□ 0.87
CCDC43-201ENST00000315286 PPP1R13BQ96KQ4 1090 aa20.52■□□□□ 0.87
CCDC43-201ENST00000315286 BAG1Q99933 345 aaPredicted RBP20.52■□□□□ 0.87
CCDC43-201ENST00000315286 MRPL11Q9Y3B7 192 aaKnown RBP20.52■□□□□ 0.87
CCDC43-201ENST00000315286 ZNF541Q9H0D2 1346 aa20.51■□□□□ 0.87
CCDC43-201ENST00000315286 ZNF76P36508 570 aa20.51■□□□□ 0.87
CCDC43-201ENST00000315286 PPP1R2P41236 205 aa20.51■□□□□ 0.87
CCDC43-201ENST00000315286 KIF4BQ2VIQ3 1234 aa20.51■□□□□ 0.87
CCDC43-201ENST00000315286 CEP135Q66GS9 1140 aa20.51■□□□□ 0.87
CCDC43-201ENST00000315286 TEX2Q8IWB9 1127 aa20.51■□□□□ 0.87
CCDC43-201ENST00000315286 CSGALNACT2Q8N6G5 542 aa20.51■□□□□ 0.87
CCDC43-201ENST00000315286 DNAJC19Q96DA6 116 aa20.51■□□□□ 0.87
CCDC43-201ENST00000315286 FAM20AQ96MK3 541 aa20.51■□□□□ 0.87
CCDC43-201ENST00000315286 BICDL2A1A5D9 508 aa20.5■□□□□ 0.87
CCDC43-201ENST00000315286 AKR1B15C9JRZ8 316 aaPredicted RBP20.5■□□□□ 0.87
CCDC43-201ENST00000315286 CTNND1O60716 968 aaKnown RBP20.5■□□□□ 0.87
CCDC43-201ENST00000315286 NBPF12Q5TAG4 269 aaPredicted RBP20.5■□□□□ 0.87
CCDC43-201ENST00000315286 PPFIBP1Q86W92 1011 aa20.5■□□□□ 0.87
CCDC43-201ENST00000315286 CPLX3Q8WVH0 158 aa20.5■□□□□ 0.87
CCDC43-201ENST00000315286 SLC26A4O43511 780 aa20.5■□□□□ 0.87
CCDC43-201ENST00000315286 SSBP05455 408 aaKnown RBP eCLIP20.5■□□□□ 0.87
CCDC43-201ENST00000315286 EEF1GP26641 437 aaKnown RBP20.5■□□□□ 0.87
CCDC43-201ENST00000315286 EHHADHQ08426 723 aa20.5■□□□□ 0.87
CCDC43-201ENST00000315286 DGKZQ13574 1117 aa20.5■□□□□ 0.87
CCDC43-201ENST00000315286 NCAPH2Q6IBW4 605 aa20.5■□□□□ 0.87
CCDC43-201ENST00000315286 NOC3LQ8WTT2 800 aaKnown RBP20.5■□□□□ 0.87
CCDC43-201ENST00000315286 EEF2KMTQ96G04 330 aa20.5■□□□□ 0.87
CCDC43-201ENST00000315286 SEMA6BQ9H3T3 888 aa20.5■□□□□ 0.87
CCDC43-201ENST00000315286 ITIH6Q6UXX5 1313 aa20.49■□□□□ 0.87
CCDC43-201ENST00000315286 IGLV3-22A0A075B6J6 115 aa20.49■□□□□ 0.87
CCDC43-201ENST00000315286 ARHGAP6O43182 974 aa20.49■□□□□ 0.87
CCDC43-201ENST00000315286 STX10O60499 249 aa20.49■□□□□ 0.87
CCDC43-201ENST00000315286 PLA2G4BP0C869 781 aa20.49■□□□□ 0.87
CCDC43-201ENST00000315286 CATSPER3Q86XQ3 398 aa20.49■□□□□ 0.87
CCDC43-201ENST00000315286 AGBL1Q96MI9 1066 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms