RNA–Protein interactions for RNA: ENST00000314595.5

POLR2B-201, Transcript of RNA polymerase II subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2B, Length 3,748 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-201ENST00000314595 PTCRAQ6ISU1 281 aaPredicted RBP4.79□□□□□ -1.64
POLR2B-201ENST00000314595 TLDC1Q6P9B6 456 aa4.79□□□□□ -1.64
POLR2B-201ENST00000314595 RUFY3Q7L099 469 aa4.79□□□□□ -1.64
POLR2B-201ENST00000314595 CCDC112Q8NEF3 446 aa4.79□□□□□ -1.64
POLR2B-201ENST00000314595 PPP1R13BQ96KQ4 1090 aa4.79□□□□□ -1.64
POLR2B-201ENST00000314595 CCDC85AQ96PX6 553 aaPredicted RBP4.79□□□□□ -1.64
POLR2B-201ENST00000314595 PHOX2BQ99453 314 aa4.79□□□□□ -1.64
POLR2B-201ENST00000314595 STK31Q9BXU1 1019 aa4.79□□□□□ -1.64
POLR2B-201ENST00000314595 LSG1Q9H089 658 aaKnown RBP4.79□□□□□ -1.64
POLR2B-201ENST00000314595 CXorf56Q9H5V9 222 aa4.79□□□□□ -1.64
POLR2B-201ENST00000314595 MYCNP04198 464 aaPredicted RBP4.79□□□□□ -1.64
POLR2B-201ENST00000314595 MRPL12P52815 198 aaKnown RBP4.79□□□□□ -1.64
POLR2B-201ENST00000314595 GRIK3Q13003 919 aa4.79□□□□□ -1.64
POLR2B-201ENST00000314595 SNW1Q13573 536 aaKnown RBP4.79□□□□□ -1.64
POLR2B-201ENST00000314595 PRPF38AQ8NAV1 312 aaKnown RBP4.79□□□□□ -1.64
POLR2B-201ENST00000314595 SRRTQ9BXP5 876 aaKnown RBP4.79□□□□□ -1.64
POLR2B-201ENST00000314595 MCM8Q9UJA3 840 aa4.79□□□□□ -1.64
POLR2B-201ENST00000314595 SCN5AQ14524 2016 aa4.78□□□□□ -1.64
POLR2B-201ENST00000314595 SUPT20HL2P0C7V6 817 aa4.78□□□□□ -1.64
POLR2B-201ENST00000314595 VCAM1P19320 739 aa4.78□□□□□ -1.64
POLR2B-201ENST00000314595 SYT1P21579 422 aa4.78□□□□□ -1.64
POLR2B-201ENST00000314595 ARID4AP29374 1257 aaPredicted RBP4.78□□□□□ -1.64
POLR2B-201ENST00000314595 PUM1Q14671 1186 aaKnown RBP eCLIP4.78□□□□□ -1.64
POLR2B-201ENST00000314595 LRRC31Q6UY01 552 aa4.78□□□□□ -1.64
POLR2B-201ENST00000314595 CCDC186Q7Z3E2 898 aa4.78□□□□□ -1.64
POLR2B-201ENST00000314595 RNF214Q8ND24 703 aa4.78□□□□□ -1.64
POLR2B-201ENST00000314595 KAT2BQ92831 832 aa4.78□□□□□ -1.64
POLR2B-201ENST00000314595 COL26A1Q96A83 441 aa4.78□□□□□ -1.64
POLR2B-201ENST00000314595 GLT1D1Q96MS3 346 aa4.78□□□□□ -1.64
POLR2B-201ENST00000314595 PATJQ8NI35 1801 aa4.78□□□□□ -1.64
POLR2B-201ENST00000314595 EYSQ5T1H1 3165 aa4.78□□□□□ -1.64
POLR2B-201ENST00000314595 GRXCR1A8MXD5 290 aa4.78□□□□□ -1.64
POLR2B-201ENST00000314595 IGFBP4P22692 258 aa4.78□□□□□ -1.64
POLR2B-201ENST00000314595 MCCP23508 829 aa4.78□□□□□ -1.64
POLR2B-201ENST00000314595 BTDP43251 543 aa4.78□□□□□ -1.64
POLR2B-201ENST00000314595 PDE1AP54750 535 aa4.78□□□□□ -1.64
POLR2B-201ENST00000314595 MMS22LQ6ZRQ5 1243 aa4.78□□□□□ -1.64
POLR2B-201ENST00000314595 ITPRIPQ8IWB1 547 aa4.78□□□□□ -1.64
POLR2B-201ENST00000314595 GPR161Q8N6U8 529 aaKnown RBP4.78□□□□□ -1.64
POLR2B-201ENST00000314595 OTUD7AQ8TE49 926 aaPredicted RBP4.78□□□□□ -1.64
POLR2B-201ENST00000314595 ZNF384Q8TF68 577 aa4.78□□□□□ -1.64
POLR2B-201ENST00000314595 GNEQ9Y223 722 aaKnown RBP4.78□□□□□ -1.64
POLR2B-201ENST00000314595 RBM47A0AV96 593 aaKnown RBP4.77□□□□□ -1.65
POLR2B-201ENST00000314595 PRDX5P30044 214 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 OAZ1P54368 228 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 COG2Q14746 738 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 KCNA10Q16322 511 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 PTPROQ16827 1216 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 BEND6Q5SZJ8 279 aaPredicted RBP4.77□□□□□ -1.65
POLR2B-201ENST00000314595 KRBA2Q6ZNG9 492 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 ATG9AQ7Z3C6 839 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 VPS37DQ86XT2 251 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 EFCAB13Q8IY85 973 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 MNS1Q8NEH6 495 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 MKL1Q969V6 931 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 TGS1Q96RS0 853 aaKnown RBP4.77□□□□□ -1.65
POLR2B-201ENST00000314595 VIPAS39Q9H9C1 493 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 ADAM21Q9UKJ8 722 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 MRFAP1Q9Y605 127 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 FAM237AA0A1B0GTK4 181 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 KPNA6O60684 536 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 PQBP1O60828 265 aaKnown RBP4.77□□□□□ -1.65
POLR2B-201ENST00000314595 TPM1P09493 284 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 ICAM3P32942 547 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 DHX8Q14562 1220 aaKnown RBP4.77□□□□□ -1.65
POLR2B-201ENST00000314595 CCDC85BQ15834 202 aaPredicted RBP4.77□□□□□ -1.65
POLR2B-201ENST00000314595 NAALADL2Q58DX5 795 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 ANKRD45Q5TZF3 282 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 ARMCX5Q6P1M9 558 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 TTC6Q86TZ1 520 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 MSLNLQ96KJ4 702 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 HIPK3Q9H422 1215 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 ZSWIM6Q9HCJ5 1215 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 FOXD4L1Q9NU39 408 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 DNAI1Q9UI46 699 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 GGA2Q9UJY4 613 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 EYA2O00167 538 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 PPP1R12AO14974 1030 aaPredicted RBP4.77□□□□□ -1.65
POLR2B-201ENST00000314595 STX6O43752 255 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 IVLP07476 585 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 CCDC192P0DO97 292 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 FCER1AP12319 257 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 IL9P15248 144 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 GTF2A1P52655 376 aaPredicted RBP4.77□□□□□ -1.65
POLR2B-201ENST00000314595 TPM4P67936 248 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 TCP10Q12799 353 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 NCAPHQ15003 741 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 NFRKBQ6P4R8 1299 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 PI4K2BQ8TCG2 481 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 NSUN4Q96CB9 384 aaKnown RBP4.77□□□□□ -1.65
POLR2B-201ENST00000314595 FSD1Q9BTV5 496 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 ANKZF1Q9H8Y5 726 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 JAG2Q9Y219 1238 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 REV3LO60673 3130 aa4.77□□□□□ -1.65
POLR2B-201ENST00000314595 EIF3CLB5ME19 914 aaKnown RBP4.76□□□□□ -1.65
POLR2B-201ENST00000314595 KIF28PB7ZC32 967 aa4.76□□□□□ -1.65
POLR2B-201ENST00000314595 ZEB2O60315 1214 aa4.76□□□□□ -1.65
POLR2B-201ENST00000314595 CLSTN1O94985 981 aa4.76□□□□□ -1.65
POLR2B-201ENST00000314595 SNAI1O95863 264 aaPredicted RBP4.76□□□□□ -1.65
POLR2B-201ENST00000314595 CA3P07451 260 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms