RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 RBM43Q6ZSC3 357 aaKnown RBP12.49□□□□□ -0.41
TRIM59-201ENST00000309784 ZNF577Q9BSK1 485 aa12.49□□□□□ -0.41
TRIM59-201ENST00000309784 NMRK2Q9NPI5 230 aa12.49□□□□□ -0.41
TRIM59-201ENST00000309784 MAN1B1Q9UKM7 699 aa12.49□□□□□ -0.41
TRIM59-201ENST00000309784 FAM86B1E9PN63 330 aa12.49□□□□□ -0.41
TRIM59-201ENST00000309784 PES1O00541 588 aaKnown RBP12.49□□□□□ -0.41
TRIM59-201ENST00000309784 SORBS3O60504 671 aa12.49□□□□□ -0.41
TRIM59-201ENST00000309784 FAM86B2P0C5J1 330 aa12.49□□□□□ -0.41
TRIM59-201ENST00000309784 FDX1P10109 184 aa12.49□□□□□ -0.41
TRIM59-201ENST00000309784 CUL4BQ13620 913 aa12.49□□□□□ -0.41
TRIM59-201ENST00000309784 CATSPERGQ6ZRH7 1159 aa12.49□□□□□ -0.41
TRIM59-201ENST00000309784 TRMT44Q8IYL2 757 aaKnown RBP12.49□□□□□ -0.41
TRIM59-201ENST00000309784 KIAA1024Q9UPX6 916 aa12.49□□□□□ -0.41
TRIM59-201ENST00000309784 ZC3H4Q9UPT8 1303 aaKnown RBP12.49□□□□□ -0.41
TRIM59-201ENST00000309784 OPLAHO14841 1288 aa12.49□□□□□ -0.41
TRIM59-201ENST00000309784 SERPINC1P01008 464 aa12.49□□□□□ -0.41
TRIM59-201ENST00000309784 PPATQ06203 517 aa12.49□□□□□ -0.41
TRIM59-201ENST00000309784 NOL9Q5SY16 702 aaKnown RBP12.49□□□□□ -0.41
TRIM59-201ENST00000309784 HAUS3Q68CZ6 603 aa12.49□□□□□ -0.41
TRIM59-201ENST00000309784 PURBQ96QR8 312 aaKnown RBP12.49□□□□□ -0.41
TRIM59-201ENST00000309784 TAAR1Q96RJ0 339 aa12.49□□□□□ -0.41
TRIM59-201ENST00000309784 PNMA2Q9UL42 364 aa12.49□□□□□ -0.41
TRIM59-201ENST00000309784 RIPK3Q9Y572 518 aa12.49□□□□□ -0.41
TRIM59-201ENST00000309784 MEIS1O00470 390 aa12.48□□□□□ -0.41
TRIM59-201ENST00000309784 P2RX7Q99572 595 aaKnown RBP12.48□□□□□ -0.41
TRIM59-201ENST00000309784 EXOC1Q9NV70 894 aa12.48□□□□□ -0.41
TRIM59-201ENST00000309784 MCM6Q14566 821 aa12.48□□□□□ -0.41
TRIM59-201ENST00000309784 CEP55Q53EZ4 464 aa12.48□□□□□ -0.41
TRIM59-201ENST00000309784 ACAD9Q9H845 621 aa12.48□□□□□ -0.41
TRIM59-201ENST00000309784 SMCHD1A6NHR9 2005 aa12.48□□□□□ -0.41
TRIM59-201ENST00000309784 GTPBP6O43824 516 aaPredicted RBP12.48□□□□□ -0.41
TRIM59-201ENST00000309784 PABPC4Q13310 644 aaKnown RBP eCLIP12.48□□□□□ -0.41
TRIM59-201ENST00000309784 TPH2Q8IWU9 490 aa12.48□□□□□ -0.41
TRIM59-201ENST00000309784 CCSER1Q9C0I3 900 aa12.48□□□□□ -0.41
TRIM59-201ENST00000309784 GBA2Q9HCG7 927 aaPredicted RBP12.48□□□□□ -0.41
TRIM59-201ENST00000309784 ZNF536O15090 1300 aa12.47□□□□□ -0.41
TRIM59-201ENST00000309784 GREB1LQ9C091 1923 aaPredicted RBP12.47□□□□□ -0.41
TRIM59-201ENST00000309784 SPDYE16A6NNV3 312 aaPredicted RBP12.47□□□□□ -0.41
TRIM59-201ENST00000309784 COBLO75128 1261 aa12.47□□□□□ -0.41
TRIM59-201ENST00000309784 STIM1Q13586 685 aa12.47□□□□□ -0.41
TRIM59-201ENST00000309784 TMEM132BQ14DG7 1078 aa12.47□□□□□ -0.41
TRIM59-201ENST00000309784 LARP4BQ92615 738 aaKnown RBP12.47□□□□□ -0.41
TRIM59-201ENST00000309784 MTMR9Q96QG7 549 aa12.47□□□□□ -0.41
TRIM59-201ENST00000309784 RMND1Q9NWS8 449 aa12.47□□□□□ -0.41
TRIM59-201ENST00000309784 FAM237AA0A1B0GTK4 181 aa12.47□□□□□ -0.41
TRIM59-201ENST00000309784 POTEB3A0JP26 581 aa12.47□□□□□ -0.41
TRIM59-201ENST00000309784 POTECB2RU33 542 aa12.47□□□□□ -0.41
TRIM59-201ENST00000309784 MSH4O15457 936 aa12.47□□□□□ -0.41
TRIM59-201ENST00000309784 OSBPP22059 807 aa12.47□□□□□ -0.41
TRIM59-201ENST00000309784 PDE4DQ08499 809 aa12.47□□□□□ -0.41
TRIM59-201ENST00000309784 POTEBQ6S5H4 581 aa12.47□□□□□ -0.41
TRIM59-201ENST00000309784 HAS1Q92839 578 aa12.47□□□□□ -0.41
TRIM59-201ENST00000309784 DICER1Q9UPY3 1922 aaKnown RBP12.47□□□□□ -0.41
TRIM59-201ENST00000309784 RPN1P04843 607 aaKnown RBP12.47□□□□□ -0.41
TRIM59-201ENST00000309784 SNAPC2Q13487 334 aa12.47□□□□□ -0.41
TRIM59-201ENST00000309784 SYTL5Q8TDW5 730 aaPredicted RBP12.47□□□□□ -0.41
TRIM59-201ENST00000309784 SPDYE5A6NIY4 337 aa12.46□□□□□ -0.41
TRIM59-201ENST00000309784 PIK3CDO00329 1044 aa12.46□□□□□ -0.41
TRIM59-201ENST00000309784 FXR2P51116 673 aaKnown RBP eCLIP12.46□□□□□ -0.41
TRIM59-201ENST00000309784 FASTKD5Q7L8L6 764 aaKnown RBP12.46□□□□□ -0.41
TRIM59-201ENST00000309784 NUDT12Q9BQG2 462 aa12.46□□□□□ -0.41
TRIM59-201ENST00000309784 NT5C3AQ9H0P0 336 aa12.46□□□□□ -0.41
TRIM59-201ENST00000309784 GOLGA6L6A8MZA4 724 aa12.46□□□□□ -0.41
TRIM59-201ENST00000309784 MYL5Q02045 173 aa12.46□□□□□ -0.41
TRIM59-201ENST00000309784 PDIA5Q14554 519 aa12.46□□□□□ -0.41
TRIM59-201ENST00000309784 SSC5DA1L4H1 1573 aa12.46□□□□□ -0.42
TRIM59-201ENST00000309784 POTEFA5A3E0 1075 aa12.46□□□□□ -0.42
TRIM59-201ENST00000309784 E9PMD0 336 aa12.46□□□□□ -0.42
TRIM59-201ENST00000309784 CXCL11O14625 94 aa12.46□□□□□ -0.42
TRIM59-201ENST00000309784 CACNB1Q02641 598 aaPredicted RBP12.46□□□□□ -0.42
TRIM59-201ENST00000309784 MTMR1Q13613 665 aa12.46□□□□□ -0.42
TRIM59-201ENST00000309784 POTEGQ6S5H5 508 aa12.46□□□□□ -0.42
TRIM59-201ENST00000309784 POTEEQ6S8J3 1075 aa12.46□□□□□ -0.42
TRIM59-201ENST00000309784 EEPD1Q7L9B9 569 aa12.46□□□□□ -0.42
TRIM59-201ENST00000309784 MLKLQ8NB16 471 aa12.46□□□□□ -0.42
TRIM59-201ENST00000309784 C12orf42Q96LP6 360 aa12.46□□□□□ -0.42
TRIM59-201ENST00000309784 FAM20AQ96MK3 541 aa12.46□□□□□ -0.42
TRIM59-201ENST00000309784 GSDMAQ96QA5 445 aa12.46□□□□□ -0.42
TRIM59-201ENST00000309784 TEKT3Q9BXF9 490 aa12.46□□□□□ -0.42
TRIM59-201ENST00000309784 ASCC2Q9H1I8 757 aaPredicted RBP12.46□□□□□ -0.42
TRIM59-201ENST00000309784 TUBE1Q9UJT0 475 aa12.46□□□□□ -0.42
TRIM59-201ENST00000309784 CTNND2Q9UQB3 1225 aa12.46□□□□□ -0.42
TRIM59-201ENST00000309784 KDM3AQ9Y4C1 1321 aa12.46□□□□□ -0.42
TRIM59-201ENST00000309784 IPO5O00410 1097 aaKnown RBP12.45□□□□□ -0.42
TRIM59-201ENST00000309784 HUNKP57058 714 aa12.45□□□□□ -0.42
TRIM59-201ENST00000309784 IGSF22Q8N9C0 903 aa12.45□□□□□ -0.42
TRIM59-201ENST00000309784 COL20A1Q9P218 1284 aa12.45□□□□□ -0.42
TRIM59-201ENST00000309784 DNM3Q9UQ16 869 aa12.45□□□□□ -0.42
TRIM59-201ENST00000309784 ARP10275 920 aa12.45□□□□□ -0.42
TRIM59-201ENST00000309784 CTTNQ14247 550 aaKnown RBP12.45□□□□□ -0.42
TRIM59-201ENST00000309784 FILIP1Q7Z7B0 1213 aa12.45□□□□□ -0.42
TRIM59-201ENST00000309784 IL31RAQ8NI17 732 aa12.45□□□□□ -0.42
TRIM59-201ENST00000309784 CLEC4DQ8WXI8 215 aa12.45□□□□□ -0.42
TRIM59-201ENST00000309784 CCL15-CCL14A0A0B4J2E2 113 aa12.45□□□□□ -0.42
TRIM59-201ENST00000309784 HERVK_113P62684 666 aa12.45□□□□□ -0.42
TRIM59-201ENST00000309784 PPIL2Q13356 520 aa12.45□□□□□ -0.42
TRIM59-201ENST00000309784 CCL15Q16663 113 aa12.45□□□□□ -0.42
TRIM59-201ENST00000309784 MIER3Q7Z3K6 550 aa12.45□□□□□ -0.42
TRIM59-201ENST00000309784 WDR11Q9BZH6 1224 aa12.45□□□□□ -0.42
TRIM59-201ENST00000309784 RTN4Q9NQC3 1192 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms