RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 STIM1Q13586 685 aa23.82■■□□□ 1.4
ATG4D-201ENST00000309469 KCNK18Q7Z418 384 aa23.82■■□□□ 1.4
ATG4D-201ENST00000309469 FAM20AQ96MK3 541 aa23.82■■□□□ 1.4
ATG4D-201ENST00000309469 LRRC27Q9C0I9 530 aa23.82■■□□□ 1.4
ATG4D-201ENST00000309469 NT5C3AQ9H0P0 336 aa23.82■■□□□ 1.4
ATG4D-201ENST00000309469 SKILP12757 684 aa23.82■■□□□ 1.4
ATG4D-201ENST00000309469 HIRAP54198 1017 aaPredicted RBP23.82■■□□□ 1.4
ATG4D-201ENST00000309469 DGKZQ13574 1117 aa23.82■■□□□ 1.4
ATG4D-201ENST00000309469 MTMR2Q13614 643 aa23.82■■□□□ 1.4
ATG4D-201ENST00000309469 NR1I3Q14994 352 aa23.82■■□□□ 1.4
ATG4D-201ENST00000309469 ARMCX5Q6P1M9 558 aa23.82■■□□□ 1.4
ATG4D-201ENST00000309469 APTXQ7Z2E3 356 aaKnown RBP23.82■■□□□ 1.4
ATG4D-201ENST00000309469 AGBL1Q96MI9 1066 aa23.82■■□□□ 1.4
ATG4D-201ENST00000309469 WDR18Q9BV38 432 aa23.82■■□□□ 1.4
ATG4D-201ENST00000309469 EMILIN3Q9NT22 766 aa23.82■■□□□ 1.4
ATG4D-201ENST00000309469 GGA3Q9NZ52 723 aa23.82■■□□□ 1.4
ATG4D-201ENST00000309469 ZNF536O15090 1300 aa23.82■■□□□ 1.4
ATG4D-201ENST00000309469 A0A1B0GTH6 734 aa23.81■■□□□ 1.4
ATG4D-201ENST00000309469 CCZ1BP86790 482 aa23.81■■□□□ 1.4
ATG4D-201ENST00000309469 CCZ1P86791 482 aaPredicted RBP23.81■■□□□ 1.4
ATG4D-201ENST00000309469 CCPG1Q9ULG6 757 aa23.81■■□□□ 1.4
ATG4D-201ENST00000309469 PVALEFA0A1B0GWK0 134 aa23.8■■□□□ 1.4
ATG4D-201ENST00000309469 MSH4O15457 936 aa23.8■■□□□ 1.4
ATG4D-201ENST00000309469 STAT3P40763 770 aa23.8■■□□□ 1.4
ATG4D-201ENST00000309469 USP14P54578 494 aa23.8■■□□□ 1.4
ATG4D-201ENST00000309469 SPIRE1Q08AE8 756 aa23.8■■□□□ 1.4
ATG4D-201ENST00000309469 SPP2Q13103 211 aa23.8■■□□□ 1.4
ATG4D-201ENST00000309469 CYP2W1Q8TAV3 490 aa23.8■■□□□ 1.4
ATG4D-201ENST00000309469 ZKSCAN4Q969J2 545 aaPredicted RBP23.8■■□□□ 1.4
ATG4D-201ENST00000309469 CTAGE1Q96RT6 745 aa23.8■■□□□ 1.4
ATG4D-201ENST00000309469 WRNIP1Q96S55 665 aa23.8■■□□□ 1.4
ATG4D-201ENST00000309469 EHMT1Q9H9B1 1298 aa23.8■■□□□ 1.4
ATG4D-201ENST00000309469 PPP2R3BQ9Y5P8 575 aa23.8■■□□□ 1.4
ATG4D-201ENST00000309469 VCAM1P19320 739 aa23.8■■□□□ 1.4
ATG4D-201ENST00000309469 SFPQP23246 707 aaKnown RBP eCLIP23.8■■□□□ 1.4
ATG4D-201ENST00000309469 CNNM4Q6P4Q7 775 aa23.8■■□□□ 1.4
ATG4D-201ENST00000309469 UNC13DQ70J99 1090 aa23.8■■□□□ 1.4
ATG4D-201ENST00000309469 DHTKD1Q96HY7 919 aaPredicted RBP23.8■■□□□ 1.4
ATG4D-201ENST00000309469 TANGO6Q9C0B7 1094 aa23.8■■□□□ 1.4
ATG4D-201ENST00000309469 PICK1Q9NRD5 415 aa23.8■■□□□ 1.4
ATG4D-201ENST00000309469 PSMA7O14818 248 aa23.79■■□□□ 1.4
ATG4D-201ENST00000309469 STK4Q13043 487 aa23.79■■□□□ 1.4
ATG4D-201ENST00000309469 AS3MTQ9HBK9 375 aa23.79■■□□□ 1.4
ATG4D-201ENST00000309469 KIAA1024Q9UPX6 916 aa23.79■■□□□ 1.4
ATG4D-201ENST00000309469 IGLV3-22A0A075B6J6 115 aa23.78■■□□□ 1.4
ATG4D-201ENST00000309469 PTPRAP18433 802 aa23.78■■□□□ 1.4
ATG4D-201ENST00000309469 PPP1R2P41236 205 aa23.78■■□□□ 1.4
ATG4D-201ENST00000309469 PTPN21Q16825 1174 aa23.78■■□□□ 1.4
ATG4D-201ENST00000309469 SLC38A10Q9HBR0 1119 aa23.78■■□□□ 1.4
ATG4D-201ENST00000309469 FLOT1O75955 427 aa23.78■■□□□ 1.4
ATG4D-201ENST00000309469 BACE1P56817 501 aa23.78■■□□□ 1.4
ATG4D-201ENST00000309469 SPAG1Q07617 926 aa23.78■■□□□ 1.4
ATG4D-201ENST00000309469 HAUS3Q68CZ6 603 aa23.78■■□□□ 1.4
ATG4D-201ENST00000309469 DYMQ7RTS9 669 aa23.78■■□□□ 1.4
ATG4D-201ENST00000309469 ZNF280CQ8ND82 737 aa23.78■■□□□ 1.4
ATG4D-201ENST00000309469 ERMNQ8TAM6 284 aa23.78■■□□□ 1.4
ATG4D-201ENST00000309469 RPAP3Q9H6T3 665 aaPredicted RBP23.78■■□□□ 1.4
ATG4D-201ENST00000309469 ADD3Q9UEY8 706 aaKnown RBP23.78■■□□□ 1.4
ATG4D-201ENST00000309469 LIMA1Q9UHB6 759 aaKnown RBP23.78■■□□□ 1.4
ATG4D-201ENST00000309469 FZD1Q9UP38 647 aa23.78■■□□□ 1.4
ATG4D-201ENST00000309469 STK24Q9Y6E0 443 aa23.78■■□□□ 1.4
ATG4D-201ENST00000309469 MED24O75448 989 aa23.77■■□□□ 1.4
ATG4D-201ENST00000309469 FCER1AP12319 257 aa23.77■■□□□ 1.4
ATG4D-201ENST00000309469 HSD17B4P51659 736 aa23.77■■□□□ 1.4
ATG4D-201ENST00000309469 PMS1P54277 932 aaKnown RBP23.77■■□□□ 1.4
ATG4D-201ENST00000309469 TBX2Q13207 712 aaPredicted RBP23.77■■□□□ 1.4
ATG4D-201ENST00000309469 COBLL1Q53SF7 1204 aa23.77■■□□□ 1.4
ATG4D-201ENST00000309469 DNTTIP2Q5QJE6 756 aaKnown RBP23.77■■□□□ 1.4
ATG4D-201ENST00000309469 SPECC1LQ69YQ0 1117 aa23.77■■□□□ 1.4
ATG4D-201ENST00000309469 NCAPH2Q6IBW4 605 aa23.77■■□□□ 1.4
ATG4D-201ENST00000309469 DDX12PQ92771 950 aa23.77■■□□□ 1.4
ATG4D-201ENST00000309469 PPP1R9AQ9ULJ8 1098 aa23.77■■□□□ 1.4
ATG4D-201ENST00000309469 POTEB3A0JP26 581 aa23.76■■□□□ 1.39
ATG4D-201ENST00000309469 TRIM49BA6NDI0 452 aa23.76■■□□□ 1.39
ATG4D-201ENST00000309469 LRRC10BA6NIK2 292 aa23.76■■□□□ 1.39
ATG4D-201ENST00000309469 POTECB2RU33 542 aa23.76■■□□□ 1.39
ATG4D-201ENST00000309469 FILIP1LQ4L180 1135 aa23.76■■□□□ 1.39
ATG4D-201ENST00000309469 POTEBQ6S5H4 581 aa23.76■■□□□ 1.39
ATG4D-201ENST00000309469 CLEC4DQ8WXI8 215 aa23.76■■□□□ 1.39
ATG4D-201ENST00000309469 KLRG1Q96E93 195 aa23.76■■□□□ 1.39
ATG4D-201ENST00000309469 VAV3Q9UKW4 847 aa23.76■■□□□ 1.39
ATG4D-201ENST00000309469 R3HCC1Q9Y3T6 440 aaKnown RBP23.76■■□□□ 1.39
ATG4D-201ENST00000309469 SMCHD1A6NHR9 2005 aa23.76■■□□□ 1.39
ATG4D-201ENST00000309469 E9PMD0 336 aa23.76■■□□□ 1.39
ATG4D-201ENST00000309469 DDNO94850 711 aaPredicted RBP23.76■■□□□ 1.39
ATG4D-201ENST00000309469 SUPT20HL1Q3ZLR7 823 aa23.76■■□□□ 1.39
ATG4D-201ENST00000309469 CPXCR1Q8N123 301 aa23.76■■□□□ 1.39
ATG4D-201ENST00000309469 RAVER2Q9HCJ3 691 aaKnown RBP23.76■■□□□ 1.39
ATG4D-201ENST00000309469 TEX33O43247 280 aa23.75■■□□□ 1.39
ATG4D-201ENST00000309469 UBXN2AP68543 259 aa23.75■■□□□ 1.39
ATG4D-201ENST00000309469 KRT31Q15323 416 aa23.75■■□□□ 1.39
ATG4D-201ENST00000309469 TCP11X2Q5H9J9 407 aa23.75■■□□□ 1.39
ATG4D-201ENST00000309469 TTI2Q6NXR4 508 aa23.75■■□□□ 1.39
ATG4D-201ENST00000309469 CATSPER3Q86XQ3 398 aa23.75■■□□□ 1.39
ATG4D-201ENST00000309469 MCF2L2Q86YR7 1114 aa23.75■■□□□ 1.39
ATG4D-201ENST00000309469 KIAA0895Q8NCT3 520 aa23.75■■□□□ 1.39
ATG4D-201ENST00000309469 P2RX5Q93086 422 aa23.75■■□□□ 1.39
ATG4D-201ENST00000309469 HPS3Q969F9 1004 aa23.75■■□□□ 1.39
ATG4D-201ENST00000309469 BMP2KQ9NSY1 1161 aaPredicted RBP23.75■■□□□ 1.39
ATG4D-201ENST00000309469 ZHX2Q9Y6X8 837 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms