RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 SPAG9O60271 1321 aaKnown RBP1.46□□□□□ -2.18
CEP290-201ENST00000309041 FLT4P35916 1363 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 NCOA2Q15596 1464 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 FAM240BA0A1B0GVZ2 78 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 C19orf84I3L1E1 186 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 K7ELQ4 463 aaPredicted RBP1.46□□□□□ -2.18
CEP290-201ENST00000309041 TULP2O00295 520 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 PSMD14O00487 310 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 CCSO14618 274 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 ULK1O75385 1050 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 PRDM1O75626 825 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 CKBP12277 381 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 CYP7A1P22680 504 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 AFF1P51825 1210 aaKnown RBP1.46□□□□□ -2.18
CEP290-201ENST00000309041 HNRNPA3P51991 378 aaKnown RBP1.46□□□□□ -2.18
CEP290-201ENST00000309041 TLE3Q04726 772 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 KCNH2Q12809 1159 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 MFSD5Q6N075 450 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 AFAP1L2Q8N4X5 818 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 XXYLT1Q8NBI6 393 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 NLGN2Q8NFZ4 835 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 ZCCHC10Q8TBK6 192 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 DDX12PQ92771 950 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 ZFP42Q96MM3 310 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 EYA1Q99502 592 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 BBS2Q9BXC9 721 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 IFT57Q9NWB7 429 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 FAM53CQ9NYF3 392 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 NRBP1Q9UHY1 535 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 HDAC9Q9UKV0 1011 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 RNF112Q9ULX5 631 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 CYP8B1Q9UNU6 501 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 PCDHGA4Q9Y5G9 962 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 OAS3Q9Y6K5 1087 aaKnown RBP1.46□□□□□ -2.18
CEP290-201ENST00000309041 ABCA8O94911 1581 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 DUOX1Q9NRD9 1551 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 MEGF11A6BM72 1044 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 PER1O15534 1290 aaPredicted RBP1.46□□□□□ -2.18
CEP290-201ENST00000309041 RFPL1O75677 317 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 GCNT3O95395 438 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 DCNP07585 359 aaKnown RBP1.46□□□□□ -2.18
CEP290-201ENST00000309041 MMEP08473 750 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 CPA1P15085 419 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 SHMT1P34896 483 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 PDE6BP35913 854 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 STAT3P40763 770 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 CCT3P49368 545 aaKnown RBP1.46□□□□□ -2.18
CEP290-201ENST00000309041 LIG3P49916 1009 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 MRPS9P82933 396 aaKnown RBP1.46□□□□□ -2.18
CEP290-201ENST00000309041 PDK3Q15120 406 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 RALBP1Q15311 655 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 UVSSAQ2YD98 709 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 RETREG3Q86VR2 466 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 GATAD2AQ86YP4 633 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 CREBRFQ8IUR6 639 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 SLC41A1Q8IVJ1 513 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 EPS8L3Q8TE67 593 aaKnown RBP1.46□□□□□ -2.18
CEP290-201ENST00000309041 POMGNT1Q8WZA1 660 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 NINJ1Q92982 152 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 TSR2Q969E8 191 aaKnown RBP1.46□□□□□ -2.18
CEP290-201ENST00000309041 ZNF333Q96JL9 665 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 KIF2CQ99661 725 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 WDR83Q9BRX9 315 aaKnown RBP1.46□□□□□ -2.18
CEP290-201ENST00000309041 FEM1AQ9BSK4 669 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 LGR4Q9BXB1 951 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 TRIM55Q9BYV6 548 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 SLC13A1Q9BZW2 595 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 COX16Q9P0S2 106 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 LARSQ9P2J5 1176 aaKnown RBP1.46□□□□□ -2.18
CEP290-201ENST00000309041 SPG7Q9UQ90 795 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 EMILIN1Q9Y6C2 1016 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 ADGRB1O14514 1584 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 UGGT2Q9NYU1 1516 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 A8MV72 311 aaPredicted RBP1.46□□□□□ -2.18
CEP290-201ENST00000309041 SPATA31C2B4DYI2 1134 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 E2F3O00716 465 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 KHNYNO15037 678 aaKnown RBP1.46□□□□□ -2.18
CEP290-201ENST00000309041 ZBTB39O15060 712 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 DUX1O43812 170 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 MGEA5O60502 916 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 PHF2O75151 1096 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 NDUFB10O96000 172 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 FYNP06241 537 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 CYP11B2P19099 503 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 MYF6P23409 242 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 EPHB3P54753 998 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 PRKD1Q15139 912 aaPredicted RBP1.46□□□□□ -2.18
CEP290-201ENST00000309041 TRADDQ15628 312 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 PGS1Q32NB8 556 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 MAP3K21Q5TCX8 1036 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 VWA5B1Q5TIE3 1220 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 ZNF449Q6P9G9 518 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 TMC7Q7Z402 723 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 PODNQ7Z5L7 613 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 AMIGO3Q86WK7 504 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 FAM13CQ8NE31 585 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 TRAPPC12Q8WVT3 735 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 ARHGEF2Q92974 986 aaKnown RBP1.46□□□□□ -2.18
CEP290-201ENST00000309041 MMP27Q9H306 513 aa1.46□□□□□ -2.18
CEP290-201ENST00000309041 VRTNQ9H8Y1 702 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms