RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 GYPCP04921 128 aa11.51□□□□□ -0.57
APOBEC3F-201ENST00000308521 CASP14P31944 242 aa11.51□□□□□ -0.57
APOBEC3F-201ENST00000308521 DPYDQ12882 1025 aa11.51□□□□□ -0.57
APOBEC3F-201ENST00000308521 CASP8Q14790 479 aa11.51□□□□□ -0.57
APOBEC3F-201ENST00000308521 ZNF174Q15697 407 aa11.51□□□□□ -0.57
APOBEC3F-201ENST00000308521 SAMD7Q7Z3H4 446 aa11.51□□□□□ -0.57
APOBEC3F-201ENST00000308521 PAGE5Q96GU1 130 aa11.51□□□□□ -0.57
APOBEC3F-201ENST00000308521 TMOD2Q9NZR1 351 aa11.51□□□□□ -0.57
APOBEC3F-201ENST00000308521 CD2APQ9Y5K6 639 aa11.51□□□□□ -0.57
APOBEC3F-201ENST00000308521 ASTN2O75129 1339 aaPredicted RBP11.51□□□□□ -0.57
APOBEC3F-201ENST00000308521 A0A0U1RQJ8 604 aa11.51□□□□□ -0.57
APOBEC3F-201ENST00000308521 WNT10BO00744 389 aa11.51□□□□□ -0.57
APOBEC3F-201ENST00000308521 GH2P01242 217 aa11.51□□□□□ -0.57
APOBEC3F-201ENST00000308521 ARHGAP25P42331 645 aa11.51□□□□□ -0.57
APOBEC3F-201ENST00000308521 CYP26C1Q6V0L0 522 aa11.51□□□□□ -0.57
APOBEC3F-201ENST00000308521 USP49Q70CQ1 688 aa11.51□□□□□ -0.57
APOBEC3F-201ENST00000308521 ATRIPQ8WXE1 791 aa11.51□□□□□ -0.57
APOBEC3F-201ENST00000308521 FAN1Q9Y2M0 1017 aa11.51□□□□□ -0.57
APOBEC3F-201ENST00000308521 GNAQP50148 359 aa11.5□□□□□ -0.57
APOBEC3F-201ENST00000308521 VSNL1P62760 191 aa11.5□□□□□ -0.57
APOBEC3F-201ENST00000308521 AMPD2Q01433 879 aa11.5□□□□□ -0.57
APOBEC3F-201ENST00000308521 CCDC96Q2M329 555 aa11.5□□□□□ -0.57
APOBEC3F-201ENST00000308521 HSP90B2PQ58FF3 399 aa11.5□□□□□ -0.57
APOBEC3F-201ENST00000308521 SIAH1Q8IUQ4 282 aa11.5□□□□□ -0.57
APOBEC3F-201ENST00000308521 CPLX3Q8WVH0 158 aa11.5□□□□□ -0.57
APOBEC3F-201ENST00000308521 FERMT2Q96AC1 680 aa11.5□□□□□ -0.57
APOBEC3F-201ENST00000308521 NUP88Q99567 741 aaPredicted RBP11.5□□□□□ -0.57
APOBEC3F-201ENST00000308521 EHD4Q9H223 541 aa11.5□□□□□ -0.57
APOBEC3F-201ENST00000308521 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.5□□□□□ -0.57
APOBEC3F-201ENST00000308521 MYO3BQ8WXR4 1341 aa11.5□□□□□ -0.57
APOBEC3F-201ENST00000308521 TRIM75PA6NK02 468 aa11.5□□□□□ -0.57
APOBEC3F-201ENST00000308521 MCM3P25205 808 aa11.5□□□□□ -0.57
APOBEC3F-201ENST00000308521 FXR1P51114 621 aaKnown RBP eCLIP11.5□□□□□ -0.57
APOBEC3F-201ENST00000308521 SPAG1Q07617 926 aa11.5□□□□□ -0.57
APOBEC3F-201ENST00000308521 ABCB5Q2M3G0 1257 aa11.5□□□□□ -0.57
APOBEC3F-201ENST00000308521 CCDC84Q86UT8 332 aaPredicted RBP11.5□□□□□ -0.57
APOBEC3F-201ENST00000308521 COA7Q96BR5 231 aa11.5□□□□□ -0.57
APOBEC3F-201ENST00000308521 MYOZ2Q9NPC6 264 aa11.5□□□□□ -0.57
APOBEC3F-201ENST00000308521 ABHD10Q9NUJ1 306 aa11.5□□□□□ -0.57
APOBEC3F-201ENST00000308521 MYO6Q9UM54 1294 aa11.5□□□□□ -0.57
APOBEC3F-201ENST00000308521 KIF13BQ9NQT8 1826 aa11.49□□□□□ -0.57
APOBEC3F-201ENST00000308521 MYH8P13535 1937 aa11.49□□□□□ -0.57
APOBEC3F-201ENST00000308521 A0A087X0B3 334 aa11.49□□□□□ -0.57
APOBEC3F-201ENST00000308521 NOVP48745 357 aa11.49□□□□□ -0.57
APOBEC3F-201ENST00000308521 AARSP49588 968 aaKnown RBP eCLIP11.49□□□□□ -0.57
APOBEC3F-201ENST00000308521 SNAP25P60880 206 aa11.49□□□□□ -0.57
APOBEC3F-201ENST00000308521 ERVK-24P63145 666 aa11.49□□□□□ -0.57
APOBEC3F-201ENST00000308521 TBC1D10BQ4KMP7 808 aaPredicted RBP11.49□□□□□ -0.57
APOBEC3F-201ENST00000308521 SPICE1Q8N0Z3 855 aa11.49□□□□□ -0.57
APOBEC3F-201ENST00000308521 ACRBPQ8NEB7 543 aa11.49□□□□□ -0.57
APOBEC3F-201ENST00000308521 AGBL3Q8NEM8 1001 aa11.49□□□□□ -0.57
APOBEC3F-201ENST00000308521 N4BP1O75113 896 aaKnown RBP11.49□□□□□ -0.57
APOBEC3F-201ENST00000308521 ENTPD3O75355 529 aa11.49□□□□□ -0.57
APOBEC3F-201ENST00000308521 RHOXF2BP0C7M4 288 aa11.49□□□□□ -0.57
APOBEC3F-201ENST00000308521 NAPAP54920 295 aa11.49□□□□□ -0.57
APOBEC3F-201ENST00000308521 STX17P56962 302 aa11.49□□□□□ -0.57
APOBEC3F-201ENST00000308521 SPDYE2Q495Y8 402 aa11.49□□□□□ -0.57
APOBEC3F-201ENST00000308521 LRCH2Q5VUJ6 765 aa11.49□□□□□ -0.57
APOBEC3F-201ENST00000308521 KLHL10Q6JEL2 608 aa11.49□□□□□ -0.57
APOBEC3F-201ENST00000308521 TATDN1Q6P1N9 297 aa11.49□□□□□ -0.57
APOBEC3F-201ENST00000308521 TNFRSF25Q93038 417 aa11.49□□□□□ -0.57
APOBEC3F-201ENST00000308521 RHOXF2Q9BQY4 288 aa11.49□□□□□ -0.57
APOBEC3F-201ENST00000308521 CNTNAP1P78357 1384 aa11.48□□□□□ -0.57
APOBEC3F-201ENST00000308521 STXBP3O00186 592 aa11.48□□□□□ -0.57
APOBEC3F-201ENST00000308521 ERCC3P19447 782 aa11.48□□□□□ -0.57
APOBEC3F-201ENST00000308521 GMPSP49915 693 aaPredicted RBP11.48□□□□□ -0.57
APOBEC3F-201ENST00000308521 ICA1Q05084 483 aa11.48□□□□□ -0.57
APOBEC3F-201ENST00000308521 C11orf91Q3C1V1 193 aa11.48□□□□□ -0.57
APOBEC3F-201ENST00000308521 ARHGAP27Q6ZUM4 889 aa11.48□□□□□ -0.57
APOBEC3F-201ENST00000308521 TADA2BQ86TJ2 420 aa11.48□□□□□ -0.57
APOBEC3F-201ENST00000308521 BLIDQ8IZY5 108 aa11.48□□□□□ -0.57
APOBEC3F-201ENST00000308521 RRP36Q96EU6 259 aaKnown RBP11.48□□□□□ -0.57
APOBEC3F-201ENST00000308521 CCDC17Q96LX7 622 aa11.48□□□□□ -0.57
APOBEC3F-201ENST00000308521 SUGCTQ9HAC7 445 aa11.48□□□□□ -0.57
APOBEC3F-201ENST00000308521 RWDD2AQ9UIY3 292 aa11.48□□□□□ -0.57
APOBEC3F-201ENST00000308521 SIPA1L1O43166 1804 aa11.48□□□□□ -0.57
APOBEC3F-201ENST00000308521 USP17L10C9JJH3 530 aa11.48□□□□□ -0.57
APOBEC3F-201ENST00000308521 MCM7P33993 719 aa11.48□□□□□ -0.57
APOBEC3F-201ENST00000308521 ECE1P42892 770 aa11.48□□□□□ -0.57
APOBEC3F-201ENST00000308521 AFMP43652 599 aa11.48□□□□□ -0.57
APOBEC3F-201ENST00000308521 NT5C2P49902 561 aa11.48□□□□□ -0.57
APOBEC3F-201ENST00000308521 KRT31Q15323 416 aa11.48□□□□□ -0.57
APOBEC3F-201ENST00000308521 MICALL2Q8IY33 904 aa11.48□□□□□ -0.57
APOBEC3F-201ENST00000308521 ADGRF4Q8IZF3 695 aa11.48□□□□□ -0.57
APOBEC3F-201ENST00000308521 CCDC148Q8NFR7 591 aa11.48□□□□□ -0.57
APOBEC3F-201ENST00000308521 FAM151AQ8WW52 585 aa11.48□□□□□ -0.57
APOBEC3F-201ENST00000308521 SYMPKQ92797 1274 aaKnown RBP11.48□□□□□ -0.57
APOBEC3F-201ENST00000308521 EPSTI1Q96J88 318 aa11.48□□□□□ -0.57
APOBEC3F-201ENST00000308521 PYM1Q9BRP8 204 aaKnown RBP11.48□□□□□ -0.57
APOBEC3F-201ENST00000308521 BARHL2Q9NY43 387 aa11.48□□□□□ -0.57
APOBEC3F-201ENST00000308521 SEC63Q9UGP8 760 aaKnown RBP11.48□□□□□ -0.57
APOBEC3F-201ENST00000308521 PLIN4Q96Q06 1357 aa11.47□□□□□ -0.57
APOBEC3F-201ENST00000308521 A0A1W2PRG0 241 aa11.47□□□□□ -0.57
APOBEC3F-201ENST00000308521 SMCO2A6NFE2 343 aa11.47□□□□□ -0.57
APOBEC3F-201ENST00000308521 COPB1P53618 953 aaKnown RBP11.47□□□□□ -0.57
APOBEC3F-201ENST00000308521 USP14P54578 494 aa11.47□□□□□ -0.57
APOBEC3F-201ENST00000308521 ZNF543Q08ER8 600 aa11.47□□□□□ -0.57
APOBEC3F-201ENST00000308521 ZYXQ15942 572 aaKnown RBP11.47□□□□□ -0.57
APOBEC3F-201ENST00000308521 PRAMEF18Q5VWM3 479 aa11.47□□□□□ -0.57
APOBEC3F-201ENST00000308521 ZNF662Q6ZS27 426 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms