RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 FAM84BQ96KN1 310 aaPredicted RBP11.74□□□□□ -0.53
SYNPO2-201ENST00000307142 SUGT1Q9Y2Z0 365 aa11.74□□□□□ -0.53
SYNPO2-201ENST00000307142 BSPRYQ5W0U4 402 aa11.74□□□□□ -0.53
SYNPO2-201ENST00000307142 LARP4BQ92615 738 aaKnown RBP11.74□□□□□ -0.53
SYNPO2-201ENST00000307142 ECE1P42892 770 aa11.74□□□□□ -0.53
SYNPO2-201ENST00000307142 MYO1EQ12965 1108 aa11.74□□□□□ -0.53
SYNPO2-201ENST00000307142 SLFNL1Q499Z3 407 aa11.74□□□□□ -0.53
SYNPO2-201ENST00000307142 TYW1BQ6NUM6 668 aa11.74□□□□□ -0.53
SYNPO2-201ENST00000307142 NBPF11Q86T75 865 aa11.74□□□□□ -0.53
SYNPO2-201ENST00000307142 CEP57Q86XR8 500 aa11.74□□□□□ -0.53
SYNPO2-201ENST00000307142 TCP11Q8WWU5 503 aa11.74□□□□□ -0.53
SYNPO2-201ENST00000307142 SELENOSQ9BQE4 189 aa11.74□□□□□ -0.53
SYNPO2-201ENST00000307142 NFE2L3Q9Y4A8 694 aa11.74□□□□□ -0.53
SYNPO2-201ENST00000307142 DLC1Q96QB1 1528 aa11.74□□□□□ -0.53
SYNPO2-201ENST00000307142 MXRA7P84157 204 aa11.74□□□□□ -0.53
SYNPO2-201ENST00000307142 FOXO4P98177 505 aa11.74□□□□□ -0.53
SYNPO2-201ENST00000307142 TWF2Q6IBS0 349 aaKnown RBP11.74□□□□□ -0.53
SYNPO2-201ENST00000307142 OR6J1Q8NGC5 347 aa11.74□□□□□ -0.53
SYNPO2-201ENST00000307142 GAP43P17677 238 aa11.74□□□□□ -0.53
SYNPO2-201ENST00000307142 XPAP23025 273 aaPredicted RBP11.74□□□□□ -0.53
SYNPO2-201ENST00000307142 ABCD1P33897 745 aa11.74□□□□□ -0.53
SYNPO2-201ENST00000307142 CTTNQ14247 550 aaKnown RBP11.74□□□□□ -0.53
SYNPO2-201ENST00000307142 ADCK5Q3MIX3 580 aa11.74□□□□□ -0.53
SYNPO2-201ENST00000307142 STRBPQ96SI9 672 aaKnown RBP11.74□□□□□ -0.53
SYNPO2-201ENST00000307142 RPAP1Q9BWH6 1393 aaPredicted RBP11.74□□□□□ -0.53
SYNPO2-201ENST00000307142 U2AF1L4Q8WU68 220 aaKnown RBP11.73□□□□□ -0.53
SYNPO2-201ENST00000307142 FAM107BQ9H098 131 aa11.73□□□□□ -0.53
SYNPO2-201ENST00000307142 ABCB4P21439 1286 aa11.73□□□□□ -0.53
SYNPO2-201ENST00000307142 NSUN6Q8TEA1 469 aaKnown RBP11.73□□□□□ -0.53
SYNPO2-201ENST00000307142 PPM1EQ8WY54 764 aa11.73□□□□□ -0.53
SYNPO2-201ENST00000307142 MIS12Q9H081 205 aa11.73□□□□□ -0.53
SYNPO2-201ENST00000307142 ERICH4A6NGS2 130 aa11.73□□□□□ -0.53
SYNPO2-201ENST00000307142 KCNJ18B7U540 433 aa11.73□□□□□ -0.53
SYNPO2-201ENST00000307142 ZBTB5O15062 677 aa11.73□□□□□ -0.53
SYNPO2-201ENST00000307142 NMT2O60551 498 aa11.73□□□□□ -0.53
SYNPO2-201ENST00000307142 KCNJ12Q14500 433 aa11.73□□□□□ -0.53
SYNPO2-201ENST00000307142 CFAP157Q5JU67 520 aa11.73□□□□□ -0.53
SYNPO2-201ENST00000307142 SAMD7Q7Z3H4 446 aa11.73□□□□□ -0.53
SYNPO2-201ENST00000307142 CCDC84Q86UT8 332 aaPredicted RBP11.73□□□□□ -0.53
SYNPO2-201ENST00000307142 ACAD9Q9H845 621 aa11.73□□□□□ -0.53
SYNPO2-201ENST00000307142 BCORL1Q5H9F3 1711 aa11.73□□□□□ -0.53
SYNPO2-201ENST00000307142 LRRC7Q96NW7 1537 aa11.73□□□□□ -0.53
SYNPO2-201ENST00000307142 CCL15-CCL14A0A0B4J2E2 113 aa11.73□□□□□ -0.53
SYNPO2-201ENST00000307142 TFRCP02786 760 aaKnown RBP11.73□□□□□ -0.53
SYNPO2-201ENST00000307142 CCL15Q16663 113 aa11.73□□□□□ -0.53
SYNPO2-201ENST00000307142 FAM26FQ5R3K3 315 aa11.73□□□□□ -0.53
SYNPO2-201ENST00000307142 UTP11Q9Y3A2 253 aaKnown RBP11.73□□□□□ -0.53
SYNPO2-201ENST00000307142 COPB2P35606 906 aa11.73□□□□□ -0.53
SYNPO2-201ENST00000307142 STAT3P40763 770 aa11.73□□□□□ -0.53
SYNPO2-201ENST00000307142 NME8Q8N427 588 aa11.73□□□□□ -0.53
SYNPO2-201ENST00000307142 STAG1Q8WVM7 1258 aa11.73□□□□□ -0.53
SYNPO2-201ENST00000307142 UBLCP1Q8WVY7 318 aaPredicted RBP11.73□□□□□ -0.53
SYNPO2-201ENST00000307142 NOC2LQ9Y3T9 749 aaKnown RBP11.73□□□□□ -0.53
SYNPO2-201ENST00000307142 CNTNAP4Q9C0A0 1308 aa11.73□□□□□ -0.53
SYNPO2-201ENST00000307142 PSMC4P43686 418 aa11.72□□□□□ -0.53
SYNPO2-201ENST00000307142 RASSF7Q02833 373 aa11.72□□□□□ -0.53
SYNPO2-201ENST00000307142 JAK3P52333 1124 aa11.72□□□□□ -0.53
SYNPO2-201ENST00000307142 BFSP1Q12934 665 aa11.72□□□□□ -0.53
SYNPO2-201ENST00000307142 LONRF3Q496Y0 759 aa11.72□□□□□ -0.53
SYNPO2-201ENST00000307142 C1orf228Q6PIY5 440 aa11.72□□□□□ -0.53
SYNPO2-201ENST00000307142 PIDD1Q9HB75 910 aa11.72□□□□□ -0.53
SYNPO2-201ENST00000307142 THAP12O43422 761 aa11.72□□□□□ -0.53
SYNPO2-201ENST00000307142 PLEKHA8P1O95397 391 aa11.72□□□□□ -0.53
SYNPO2-201ENST00000307142 HADHQ16836 314 aaKnown RBP11.72□□□□□ -0.53
SYNPO2-201ENST00000307142 SPECC1LQ69YQ0 1117 aa11.72□□□□□ -0.53
SYNPO2-201ENST00000307142 ZNF280CQ8ND82 737 aa11.72□□□□□ -0.53
SYNPO2-201ENST00000307142 RSAD2Q8WXG1 361 aa11.72□□□□□ -0.53
SYNPO2-201ENST00000307142 CEP63Q96MT8 703 aa11.72□□□□□ -0.53
SYNPO2-201ENST00000307142 KCNK9Q9NPC2 374 aa11.72□□□□□ -0.53
SYNPO2-201ENST00000307142 NXF1Q9UBU9 619 aaKnown RBP11.72□□□□□ -0.53
SYNPO2-201ENST00000307142 ZNF70Q9UC06 446 aaPredicted RBP11.72□□□□□ -0.53
SYNPO2-201ENST00000307142 SLC12A6Q9UHW9 1150 aa11.72□□□□□ -0.53
SYNPO2-201ENST00000307142 IQGAP1P46940 1657 aa11.72□□□□□ -0.53
SYNPO2-201ENST00000307142 K7ERI5 159 aa11.72□□□□□ -0.53
SYNPO2-201ENST00000307142 BANK1Q8NDB2 785 aa11.72□□□□□ -0.53
SYNPO2-201ENST00000307142 AK8Q96MA6 479 aa11.72□□□□□ -0.53
SYNPO2-201ENST00000307142 CLIC2O15247 247 aa11.72□□□□□ -0.53
SYNPO2-201ENST00000307142 GADD45BO75293 160 aaPredicted RBP11.72□□□□□ -0.53
SYNPO2-201ENST00000307142 EPHX2P34913 555 aa11.72□□□□□ -0.53
SYNPO2-201ENST00000307142 SYCE1Q8N0S2 351 aa11.72□□□□□ -0.53
SYNPO2-201ENST00000307142 F5H6K3 240 aa11.71□□□□□ -0.53
SYNPO2-201ENST00000307142 GIPC1O14908 333 aa11.71□□□□□ -0.53
SYNPO2-201ENST00000307142 KLRC3Q07444 240 aa11.71□□□□□ -0.53
SYNPO2-201ENST00000307142 PRPF38AQ8NAV1 312 aaKnown RBP11.71□□□□□ -0.53
SYNPO2-201ENST00000307142 SMC1BQ8NDV3 1235 aa11.71□□□□□ -0.53
SYNPO2-201ENST00000307142 GANCQ8TET4 914 aa11.71□□□□□ -0.53
SYNPO2-201ENST00000307142 USP28Q96RU2 1077 aa11.71□□□□□ -0.53
SYNPO2-201ENST00000307142 ZNF302Q9NR11 478 aa11.71□□□□□ -0.53
SYNPO2-201ENST00000307142 USP42Q9H9J4 1324 aaKnown RBP11.71□□□□□ -0.53
SYNPO2-201ENST00000307142 PRPF3O43395 683 aaKnown RBP11.71□□□□□ -0.53
SYNPO2-201ENST00000307142 GTPBP6O43824 516 aaPredicted RBP11.71□□□□□ -0.53
SYNPO2-201ENST00000307142 TGFB2P61812 414 aa11.71□□□□□ -0.53
SYNPO2-201ENST00000307142 THEM5Q8N1Q8 247 aa11.71□□□□□ -0.53
SYNPO2-201ENST00000307142 TMEM47Q9BQJ4 181 aa11.71□□□□□ -0.53
SYNPO2-201ENST00000307142 DCP1AQ9NPI6 582 aaPredicted RBP11.71□□□□□ -0.53
SYNPO2-201ENST00000307142 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.71□□□□□ -0.53
SYNPO2-201ENST00000307142 CCDC94Q9BW85 323 aaPredicted RBP11.71□□□□□ -0.53
SYNPO2-201ENST00000307142 NUCKS1Q9H1E3 243 aaKnown RBP11.71□□□□□ -0.53
SYNPO2-201ENST00000307142 CPS1P31327 1500 aa11.71□□□□□ -0.53
SYNPO2-201ENST00000307142 TLDC2A0PJX2 215 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 193.4 ms