RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 KRT79Q5XKE5 535 aa13.15□□□□□ -0.3
RHO-201ENST00000296271 NOC4LQ9BVI4 516 aaKnown RBP13.15□□□□□ -0.3
RHO-201ENST00000296271 LUC7L2Q9Y383 392 aaKnown RBP13.15□□□□□ -0.3
RHO-201ENST00000296271 TPM1P09493 284 aa13.14□□□□□ -0.31
RHO-201ENST00000296271 MRPL12P52815 198 aaKnown RBP13.14□□□□□ -0.31
RHO-201ENST00000296271 PSMC6P62333 389 aa13.14□□□□□ -0.31
RHO-201ENST00000296271 ZYXQ15942 572 aaKnown RBP13.14□□□□□ -0.31
RHO-201ENST00000296271 TMEM266Q2M3C6 531 aa13.14□□□□□ -0.31
RHO-201ENST00000296271 CYP26C1Q6V0L0 522 aa13.14□□□□□ -0.31
RHO-201ENST00000296271 TMTC1Q8IUR5 882 aa13.14□□□□□ -0.31
RHO-201ENST00000296271 NELFCDQ8IXH7 590 aa13.14□□□□□ -0.31
RHO-201ENST00000296271 ACER1Q8TDN7 264 aa13.14□□□□□ -0.31
RHO-201ENST00000296271 C7orf43Q8WVR3 580 aa13.14□□□□□ -0.31
RHO-201ENST00000296271 DNAJC19Q96DA6 116 aa13.14□□□□□ -0.31
RHO-201ENST00000296271 NAA15Q9BXJ9 866 aaKnown RBP13.14□□□□□ -0.31
RHO-201ENST00000296271 CUEDC2Q9H467 287 aa13.14□□□□□ -0.31
RHO-201ENST00000296271 FAM207AQ9NSI2 230 aaPredicted RBP13.14□□□□□ -0.31
RHO-201ENST00000296271 HDAC6Q9UBN7 1215 aa13.14□□□□□ -0.31
RHO-201ENST00000296271 EPN1Q9Y6I3 576 aaPredicted RBP13.14□□□□□ -0.31
RHO-201ENST00000296271 POTEFA5A3E0 1075 aa13.14□□□□□ -0.31
RHO-201ENST00000296271 MED24O75448 989 aa13.14□□□□□ -0.31
RHO-201ENST00000296271 NDUFA10O95299 355 aa13.14□□□□□ -0.31
RHO-201ENST00000296271 POTEIP0CG38 1075 aa13.14□□□□□ -0.31
RHO-201ENST00000296271 TRIM21P19474 475 aaKnown RBP13.14□□□□□ -0.31
RHO-201ENST00000296271 ABCB5Q2M3G0 1257 aa13.14□□□□□ -0.31
RHO-201ENST00000296271 GLIPR1L2Q4G1C9 344 aa13.14□□□□□ -0.31
RHO-201ENST00000296271 PRR16Q569H4 304 aa13.14□□□□□ -0.31
RHO-201ENST00000296271 PPP4R3AQ6IN85 833 aa13.14□□□□□ -0.31
RHO-201ENST00000296271 POTEGQ6S5H5 508 aa13.14□□□□□ -0.31
RHO-201ENST00000296271 POTEEQ6S8J3 1075 aa13.14□□□□□ -0.31
RHO-201ENST00000296271 KRT26Q7Z3Y9 468 aa13.14□□□□□ -0.31
RHO-201ENST00000296271 OR8K1Q8NGG5 319 aa13.14□□□□□ -0.31
RHO-201ENST00000296271 TRIM34Q9BYJ4 488 aa13.14□□□□□ -0.31
RHO-201ENST00000296271 ANO3Q9BYT9 981 aa13.14□□□□□ -0.31
RHO-201ENST00000296271 TTYH3Q9C0H2 523 aa13.14□□□□□ -0.31
RHO-201ENST00000296271 EHD4Q9H223 541 aa13.14□□□□□ -0.31
RHO-201ENST00000296271 OPLAHO14841 1288 aa13.13□□□□□ -0.31
RHO-201ENST00000296271 PPIP5K2O43314 1243 aa13.13□□□□□ -0.31
RHO-201ENST00000296271 MYL1P05976 194 aa13.13□□□□□ -0.31
RHO-201ENST00000296271 UBXN2AP68543 259 aa13.13□□□□□ -0.31
RHO-201ENST00000296271 TMEM119Q4V9L6 283 aa13.13□□□□□ -0.31
RHO-201ENST00000296271 CENPPQ6IPU0 288 aa13.13□□□□□ -0.31
RHO-201ENST00000296271 TATDN1Q6P1N9 297 aa13.13□□□□□ -0.31
RHO-201ENST00000296271 UNC13DQ70J99 1090 aa13.13□□□□□ -0.31
RHO-201ENST00000296271 CSRNP1Q96S65 589 aa13.13□□□□□ -0.31
RHO-201ENST00000296271 IDI2Q9BXS1 227 aa13.13□□□□□ -0.31
RHO-201ENST00000296271 LACRTQ9GZZ8 138 aa13.13□□□□□ -0.31
RHO-201ENST00000296271 CAPN11Q9UMQ6 739 aa13.13□□□□□ -0.31
RHO-201ENST00000296271 GOLGA6L9A6NEM1 432 aa13.13□□□□□ -0.31
RHO-201ENST00000296271 FAM86B1E9PN63 330 aa13.13□□□□□ -0.31
RHO-201ENST00000296271 hCG_1984214I3L0E3 225 aa13.13□□□□□ -0.31
RHO-201ENST00000296271 KIF5CO60282 957 aa13.13□□□□□ -0.31
RHO-201ENST00000296271 FAM86B2P0C5J1 330 aa13.13□□□□□ -0.31
RHO-201ENST00000296271 KIF4BQ2VIQ3 1234 aa13.13□□□□□ -0.31
RHO-201ENST00000296271 CNNM4Q6P4Q7 775 aa13.13□□□□□ -0.31
RHO-201ENST00000296271 ZNF713Q8N859 430 aaPredicted RBP13.13□□□□□ -0.31
RHO-201ENST00000296271 ZHX3Q9H4I2 956 aa13.13□□□□□ -0.31
RHO-201ENST00000296271 SRGAP2O75044 1071 aa13.12□□□□□ -0.31
RHO-201ENST00000296271 DNM2P50570 870 aa13.12□□□□□ -0.31
RHO-201ENST00000296271 AMPD3Q01432 767 aa13.12□□□□□ -0.31
RHO-201ENST00000296271 COASYQ13057 564 aa13.12□□□□□ -0.31
RHO-201ENST00000296271 PDIA5Q14554 519 aa13.12□□□□□ -0.31
RHO-201ENST00000296271 NCAPH2Q6IBW4 605 aa13.12□□□□□ -0.31
RHO-201ENST00000296271 MIGA2Q7L4E1 593 aa13.12□□□□□ -0.31
RHO-201ENST00000296271 SMCR8Q8TEV9 937 aaPredicted RBP13.12□□□□□ -0.31
RHO-201ENST00000296271 CCDC51Q96ER9 411 aa13.12□□□□□ -0.31
RHO-201ENST00000296271 CCDC17Q96LX7 622 aa13.12□□□□□ -0.31
RHO-201ENST00000296271 DNAJC7Q99615 494 aa13.12□□□□□ -0.31
RHO-201ENST00000296271 ZMYND15Q9H091 742 aa13.12□□□□□ -0.31
RHO-201ENST00000296271 OGFRQ9NZT2 677 aa13.12□□□□□ -0.31
RHO-201ENST00000296271 MYO3BQ8WXR4 1341 aa13.12□□□□□ -0.31
RHO-201ENST00000296271 ZNF263O14978 683 aa13.12□□□□□ -0.31
RHO-201ENST00000296271 TUBB4AP04350 444 aa13.12□□□□□ -0.31
RHO-201ENST00000296271 CYP4A11Q02928 519 aa13.12□□□□□ -0.31
RHO-201ENST00000296271 RSRC2Q7L4I2 434 aaKnown RBP13.12□□□□□ -0.31
RHO-201ENST00000296271 MKL1Q969V6 931 aa13.12□□□□□ -0.31
RHO-201ENST00000296271 IKZF4Q9H2S9 585 aa13.12□□□□□ -0.31
RHO-201ENST00000296271 NYAP2Q9P242 653 aa13.12□□□□□ -0.31
RHO-201ENST00000296271 STK17AQ9UEE5 414 aa13.12□□□□□ -0.31
RHO-201ENST00000296271 FHOD1Q9Y613 1164 aa13.12□□□□□ -0.31
RHO-201ENST00000296271 ZNF646O15015 1829 aaPredicted RBP13.11□□□□□ -0.31
RHO-201ENST00000296271 A0A1W2PQC6 194 aa13.11□□□□□ -0.31
RHO-201ENST00000296271 SHTN1A0MZ66 631 aa13.11□□□□□ -0.31
RHO-201ENST00000296271 EFCAB8A8MWE9 144 aa13.11□□□□□ -0.31
RHO-201ENST00000296271 POLD1P28340 1107 aa13.11□□□□□ -0.31
RHO-201ENST00000296271 CASP5P51878 434 aa13.11□□□□□ -0.31
RHO-201ENST00000296271 ARHGAP4P98171 946 aa13.11□□□□□ -0.31
RHO-201ENST00000296271 EHHADHQ08426 723 aa13.11□□□□□ -0.31
RHO-201ENST00000296271 PARD6BQ9BYG5 372 aa13.11□□□□□ -0.31
RHO-201ENST00000296271 GLIS2Q9BZE0 524 aaPredicted RBP13.11□□□□□ -0.31
RHO-201ENST00000296271 DHX36Q9H2U1 1008 aaKnown RBP13.11□□□□□ -0.31
RHO-201ENST00000296271 MAGEF1Q9HAY2 307 aa13.11□□□□□ -0.31
RHO-201ENST00000296271 ZNF277Q9NRM2 450 aaPredicted RBP13.11□□□□□ -0.31
RHO-201ENST00000296271 BICDL2A1A5D9 508 aa13.11□□□□□ -0.31
RHO-201ENST00000296271 SASH3O75995 380 aa13.11□□□□□ -0.31
RHO-201ENST00000296271 ARSHQ5FYA8 562 aa13.11□□□□□ -0.31
RHO-201ENST00000296271 LRRC55Q6ZSA7 311 aa13.11□□□□□ -0.31
RHO-201ENST00000296271 CCDC47Q96A33 483 aaKnown RBP13.11□□□□□ -0.31
RHO-201ENST00000296271 FEZ1Q99689 392 aa13.11□□□□□ -0.31
RHO-201ENST00000296271 MMRN2Q9H8L6 949 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms