RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 ADSSL1Q8N142 457 aa10.38□□□□□ -0.75
CLRN1-201ENST00000295911 GIMAP8Q8ND71 665 aaPredicted RBP10.38□□□□□ -0.75
CLRN1-201ENST00000295911 KIF18AQ8NI77 898 aa10.38□□□□□ -0.75
CLRN1-201ENST00000295911 ZC3H15Q8WU90 426 aaKnown RBP10.38□□□□□ -0.75
CLRN1-201ENST00000295911 FAM151AQ8WW52 585 aa10.38□□□□□ -0.75
CLRN1-201ENST00000295911 CDK5RAP3Q96JB5 506 aa10.38□□□□□ -0.75
CLRN1-201ENST00000295911 PRMT6Q96LA8 375 aaPredicted RBP10.38□□□□□ -0.75
CLRN1-201ENST00000295911 PANX2Q96RD6 677 aa10.38□□□□□ -0.75
CLRN1-201ENST00000295911 MAP7D2Q96T17 732 aa10.38□□□□□ -0.75
CLRN1-201ENST00000295911 NAA15Q9BXJ9 866 aaKnown RBP10.38□□□□□ -0.75
CLRN1-201ENST00000295911 RGS17Q9UGC6 210 aaPredicted RBP10.38□□□□□ -0.75
CLRN1-201ENST00000295911 PCDHA1Q9Y5I3 950 aa10.38□□□□□ -0.75
CLRN1-201ENST00000295911 PCDHAC2Q9Y5I4 1007 aa10.38□□□□□ -0.75
CLRN1-201ENST00000295911 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.38□□□□□ -0.75
CLRN1-201ENST00000295911 ITIH6Q6UXX5 1313 aa10.37□□□□□ -0.75
CLRN1-201ENST00000295911 PVALEFA0A1B0GWK0 134 aa10.37□□□□□ -0.75
CLRN1-201ENST00000295911 SPDYE16A6NNV3 312 aaPredicted RBP10.37□□□□□ -0.75
CLRN1-201ENST00000295911 AKR1B15C9JRZ8 316 aaPredicted RBP10.37□□□□□ -0.75
CLRN1-201ENST00000295911 KLRC4O43908 158 aa10.37□□□□□ -0.75
CLRN1-201ENST00000295911 MARCH6O60337 910 aa10.37□□□□□ -0.75
CLRN1-201ENST00000295911 FOSP01100 380 aaPredicted RBP10.37□□□□□ -0.75
CLRN1-201ENST00000295911 AP3B2Q13367 1082 aa10.37□□□□□ -0.75
CLRN1-201ENST00000295911 TRIM14Q14142 442 aa10.37□□□□□ -0.75
CLRN1-201ENST00000295911 CDC37Q16543 378 aaPredicted RBP10.37□□□□□ -0.75
CLRN1-201ENST00000295911 QRICH1Q2TAL8 776 aa10.37□□□□□ -0.75
CLRN1-201ENST00000295911 HSP90AA4PQ58FG1 418 aa10.37□□□□□ -0.75
CLRN1-201ENST00000295911 TCP11X2Q5H9J9 407 aa10.37□□□□□ -0.75
CLRN1-201ENST00000295911 E4F1Q66K89 784 aaPredicted RBP10.37□□□□□ -0.75
CLRN1-201ENST00000295911 CNNM4Q6P4Q7 775 aa10.37□□□□□ -0.75
CLRN1-201ENST00000295911 MOXD1Q6UVY6 613 aa10.37□□□□□ -0.75
CLRN1-201ENST00000295911 BTNL9Q6UXG8 535 aa10.37□□□□□ -0.75
CLRN1-201ENST00000295911 APTXQ7Z2E3 356 aaKnown RBP10.37□□□□□ -0.75
CLRN1-201ENST00000295911 SIAH1Q8IUQ4 282 aa10.37□□□□□ -0.75
CLRN1-201ENST00000295911 LARGE2Q8N3Y3 721 aa10.37□□□□□ -0.75
CLRN1-201ENST00000295911 MTMR14Q8NCE2 650 aa10.37□□□□□ -0.75
CLRN1-201ENST00000295911 CCDC51Q96ER9 411 aa10.37□□□□□ -0.75
CLRN1-201ENST00000295911 CSRNP1Q96S65 589 aa10.37□□□□□ -0.75
CLRN1-201ENST00000295911 GMLQ99445 158 aa10.37□□□□□ -0.75
CLRN1-201ENST00000295911 BAG1Q99933 345 aaPredicted RBP10.37□□□□□ -0.75
CLRN1-201ENST00000295911 AMNQ9BXJ7 453 aa10.37□□□□□ -0.75
CLRN1-201ENST00000295911 TRIM9Q9C026 710 aa10.37□□□□□ -0.75
CLRN1-201ENST00000295911 THAP9Q9H5L6 903 aa10.37□□□□□ -0.75
CLRN1-201ENST00000295911 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.37□□□□□ -0.75
CLRN1-201ENST00000295911 ARHGEF10LQ9HCE6 1279 aa10.37□□□□□ -0.75
CLRN1-201ENST00000295911 EXOC1Q9NV70 894 aa10.37□□□□□ -0.75
CLRN1-201ENST00000295911 TRMT1Q9NXH9 659 aaKnown RBP10.37□□□□□ -0.75
CLRN1-201ENST00000295911 DDX25Q9UHL0 483 aaKnown RBP10.37□□□□□ -0.75
CLRN1-201ENST00000295911 CYP3A7-CYP3A51PA0A087WV96 503 aa10.36□□□□□ -0.75
CLRN1-201ENST00000295911 FAM196BA6NMK8 535 aa10.36□□□□□ -0.75
CLRN1-201ENST00000295911 USP27XA6NNY8 438 aa10.36□□□□□ -0.75
CLRN1-201ENST00000295911 KCNJ18B7U540 433 aa10.36□□□□□ -0.75
CLRN1-201ENST00000295911 N4BP3O15049 544 aa10.36□□□□□ -0.75
CLRN1-201ENST00000295911 RAD21O60216 631 aa10.36□□□□□ -0.75
CLRN1-201ENST00000295911 BMP3P12645 472 aa10.36□□□□□ -0.75
CLRN1-201ENST00000295911 CYP3A7P24462 503 aa10.36□□□□□ -0.75
CLRN1-201ENST00000295911 EEF1GP26641 437 aaKnown RBP10.36□□□□□ -0.75
CLRN1-201ENST00000295911 PBX1P40424 430 aa10.36□□□□□ -0.75
CLRN1-201ENST00000295911 KCNJ12Q14500 433 aa10.36□□□□□ -0.75
CLRN1-201ENST00000295911 SYCP1Q15431 976 aa10.36□□□□□ -0.75
CLRN1-201ENST00000295911 UBE2SQ16763 222 aa10.36□□□□□ -0.75
CLRN1-201ENST00000295911 SYDE2Q5VT97 1194 aa10.36□□□□□ -0.75
CLRN1-201ENST00000295911 FBXO11Q86XK2 927 aa10.36□□□□□ -0.75
CLRN1-201ENST00000295911 FAM114A1Q8IWE2 563 aa10.36□□□□□ -0.75
CLRN1-201ENST00000295911 SLFN12Q8IYM2 578 aa10.36□□□□□ -0.75
CLRN1-201ENST00000295911 TC2NQ8N9U0 490 aa10.36□□□□□ -0.75
CLRN1-201ENST00000295911 AGBL3Q8NEM8 1001 aa10.36□□□□□ -0.75
CLRN1-201ENST00000295911 PPP1R13BQ96KQ4 1090 aa10.36□□□□□ -0.75
CLRN1-201ENST00000295911 MMTAG2Q9BU76 263 aaKnown RBP10.36□□□□□ -0.75
CLRN1-201ENST00000295911 MAGEC2Q9UBF1 373 aaPredicted RBP10.36□□□□□ -0.75
CLRN1-201ENST00000295911 PCDHA12Q9UN75 941 aa10.36□□□□□ -0.75
CLRN1-201ENST00000295911 GDAQ9Y2T3 454 aa10.36□□□□□ -0.75
CLRN1-201ENST00000295911 ATAD5Q96QE3 1844 aa10.36□□□□□ -0.75
CLRN1-201ENST00000295911 KDM3AQ9Y4C1 1321 aa10.36□□□□□ -0.75
CLRN1-201ENST00000295911 FER1L6Q2WGJ9 1857 aa10.36□□□□□ -0.75
CLRN1-201ENST00000295911 CTIFO43310 598 aaKnown RBP10.35□□□□□ -0.75
CLRN1-201ENST00000295911 SLC37A4O43826 429 aa10.35□□□□□ -0.75
CLRN1-201ENST00000295911 GDF11O95390 407 aa10.35□□□□□ -0.75
CLRN1-201ENST00000295911 TDP2O95551 362 aa10.35□□□□□ -0.75
CLRN1-201ENST00000295911 NDUFB10O96000 172 aa10.35□□□□□ -0.75
CLRN1-201ENST00000295911 GH2P01242 217 aa10.35□□□□□ -0.75
CLRN1-201ENST00000295911 COPB1P53618 953 aaKnown RBP10.35□□□□□ -0.75
CLRN1-201ENST00000295911 ASIC1P78348 528 aa10.35□□□□□ -0.75
CLRN1-201ENST00000295911 PDE4DQ08499 809 aa10.35□□□□□ -0.75
CLRN1-201ENST00000295911 PSMD2Q13200 908 aa10.35□□□□□ -0.75
CLRN1-201ENST00000295911 GRB10Q13322 594 aa10.35□□□□□ -0.75
CLRN1-201ENST00000295911 KRT31Q15323 416 aa10.35□□□□□ -0.75
CLRN1-201ENST00000295911 TMEM132AQ24JP5 1023 aa10.35□□□□□ -0.75
CLRN1-201ENST00000295911 TSR1Q2NL82 804 aaKnown RBP10.35□□□□□ -0.75
CLRN1-201ENST00000295911 FAM83AQ86UY5 434 aa10.35□□□□□ -0.75
CLRN1-201ENST00000295911 CNGA4Q8IV77 575 aa10.35□□□□□ -0.75
CLRN1-201ENST00000295911 NIM1KQ8IY84 436 aa10.35□□□□□ -0.75
CLRN1-201ENST00000295911 PLIN2Q99541 437 aa10.35□□□□□ -0.75
CLRN1-201ENST00000295911 NT5C3AQ9H0P0 336 aa10.35□□□□□ -0.75
CLRN1-201ENST00000295911 GOPCQ9HD26 462 aa10.35□□□□□ -0.75
CLRN1-201ENST00000295911 ZNF70Q9UC06 446 aaPredicted RBP10.35□□□□□ -0.75
CLRN1-201ENST00000295911 ZNRF3Q9ULT6 936 aa10.35□□□□□ -0.75
CLRN1-201ENST00000295911 PSMD14O00487 310 aa10.34□□□□□ -0.75
CLRN1-201ENST00000295911 TBX3O15119 743 aa10.34□□□□□ -0.75
CLRN1-201ENST00000295911 TEX33O43247 280 aa10.34□□□□□ -0.75
CLRN1-201ENST00000295911 RRP9O43818 475 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms