RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 AMFRQ9UKV5 643 aa19.4■□□□□ 0.7
CDC42EP3-201ENST00000295324 GNAT1P11488 350 aa19.4■□□□□ 0.7
CDC42EP3-201ENST00000295324 SLC15A2Q16348 729 aa19.4■□□□□ 0.7
CDC42EP3-201ENST00000295324 KIAA1841Q6NSI8 718 aa19.4■□□□□ 0.7
CDC42EP3-201ENST00000295324 MICALL2Q8IY33 904 aa19.4■□□□□ 0.7
CDC42EP3-201ENST00000295324 TIGD1Q96MW7 591 aa19.4■□□□□ 0.7
CDC42EP3-201ENST00000295324 RAVER2Q9HCJ3 691 aaKnown RBP19.4■□□□□ 0.7
CDC42EP3-201ENST00000295324 PCDHA5Q9Y5H7 936 aa19.4■□□□□ 0.7
CDC42EP3-201ENST00000295324 STAM2O75886 525 aa19.39■□□□□ 0.7
CDC42EP3-201ENST00000295324 ZBTB16Q05516 673 aa19.39■□□□□ 0.7
CDC42EP3-201ENST00000295324 FAM167AQ96KS9 214 aa19.39■□□□□ 0.7
CDC42EP3-201ENST00000295324 RNF146Q9NTX7 359 aa19.39■□□□□ 0.7
CDC42EP3-201ENST00000295324 TTLL3Q9Y4R7 772 aa19.39■□□□□ 0.7
CDC42EP3-201ENST00000295324 ABCB11O95342 1321 aa19.39■□□□□ 0.69
CDC42EP3-201ENST00000295324 MFAP3P55082 362 aa19.39■□□□□ 0.69
CDC42EP3-201ENST00000295324 IFRD2Q12894 506 aaPredicted RBP19.39■□□□□ 0.69
CDC42EP3-201ENST00000295324 CEP95Q96GE4 821 aa19.39■□□□□ 0.69
CDC42EP3-201ENST00000295324 FAM81BQ96LP2 452 aa19.39■□□□□ 0.69
CDC42EP3-201ENST00000295324 ATP5DP30049 168 aa19.39■□□□□ 0.69
CDC42EP3-201ENST00000295324 RCAN1P53805 252 aa19.39■□□□□ 0.69
CDC42EP3-201ENST00000295324 SNAP25P60880 206 aa19.39■□□□□ 0.69
CDC42EP3-201ENST00000295324 ARL6IP4Q66PJ3 421 aaKnown RBP19.39■□□□□ 0.69
CDC42EP3-201ENST00000295324 UBLCP1Q8WVY7 318 aaPredicted RBP19.39■□□□□ 0.69
CDC42EP3-201ENST00000295324 PARVGQ9HBI0 331 aa19.39■□□□□ 0.69
CDC42EP3-201ENST00000295324 TMEM63CQ9P1W3 806 aa19.39■□□□□ 0.69
CDC42EP3-201ENST00000295324 PLEKHA8P1O95397 391 aa19.39■□□□□ 0.69
CDC42EP3-201ENST00000295324 IVLP07476 585 aa19.39■□□□□ 0.69
CDC42EP3-201ENST00000295324 TRIM50Q86XT4 487 aa19.39■□□□□ 0.69
CDC42EP3-201ENST00000295324 ZMYND15Q9H091 742 aa19.39■□□□□ 0.69
CDC42EP3-201ENST00000295324 NEXMIFQ5QGS0 1516 aa19.39■□□□□ 0.69
CDC42EP3-201ENST00000295324 F5H6K3 240 aa19.38■□□□□ 0.69
CDC42EP3-201ENST00000295324 SLFN14P0C7P3 912 aa19.38■□□□□ 0.69
CDC42EP3-201ENST00000295324 POLR2FP61218 127 aaKnown RBP19.38■□□□□ 0.69
CDC42EP3-201ENST00000295324 MYL7Q01449 175 aa19.38■□□□□ 0.69
CDC42EP3-201ENST00000295324 KLRC3Q07444 240 aa19.38■□□□□ 0.69
CDC42EP3-201ENST00000295324 UAP1Q16222 522 aaPredicted RBP19.38■□□□□ 0.69
CDC42EP3-201ENST00000295324 SCYL2Q6P3W7 929 aa19.38■□□□□ 0.69
CDC42EP3-201ENST00000295324 DIP2AQ14689 1571 aa19.38■□□□□ 0.69
CDC42EP3-201ENST00000295324 ABCB4P21439 1286 aa19.38■□□□□ 0.69
CDC42EP3-201ENST00000295324 PTPREP23469 700 aa19.38■□□□□ 0.69
CDC42EP3-201ENST00000295324 KIF11P52732 1056 aa19.38■□□□□ 0.69
CDC42EP3-201ENST00000295324 SMIM5Q71RC9 77 aa19.38■□□□□ 0.69
CDC42EP3-201ENST00000295324 SLC44A5Q8NCS7 719 aa19.38■□□□□ 0.69
CDC42EP3-201ENST00000295324 MEIS1O00470 390 aa19.38■□□□□ 0.69
CDC42EP3-201ENST00000295324 ALCAMQ13740 583 aa19.38■□□□□ 0.69
CDC42EP3-201ENST00000295324 STYK1Q6J9G0 422 aa19.38■□□□□ 0.69
CDC42EP3-201ENST00000295324 KCNK9Q9NPC2 374 aa19.38■□□□□ 0.69
CDC42EP3-201ENST00000295324 LRRC7Q96NW7 1537 aa19.38■□□□□ 0.69
CDC42EP3-201ENST00000295324 KRT81Q14533 505 aa19.38■□□□□ 0.69
CDC42EP3-201ENST00000295324 FAM186BQ8IYM0 893 aa19.38■□□□□ 0.69
CDC42EP3-201ENST00000295324 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.38■□□□□ 0.69
CDC42EP3-201ENST00000295324 PCDHA6Q9UN73 950 aa19.38■□□□□ 0.69
CDC42EP3-201ENST00000295324 PCDHA8Q9Y5H6 950 aa19.38■□□□□ 0.69
CDC42EP3-201ENST00000295324 V9GYY5 206 aaPredicted RBP19.38■□□□□ 0.69
CDC42EP3-201ENST00000295324 CUL4AQ13619 759 aa19.38■□□□□ 0.69
CDC42EP3-201ENST00000295324 CFAP221Q4G0U5 840 aa19.38■□□□□ 0.69
CDC42EP3-201ENST00000295324 PPP1R18Q6NYC8 613 aa19.38■□□□□ 0.69
CDC42EP3-201ENST00000295324 TBC1D10CQ8IV04 446 aa19.38■□□□□ 0.69
CDC42EP3-201ENST00000295324 ATRIPQ8WXE1 791 aa19.38■□□□□ 0.69
CDC42EP3-201ENST00000295324 FAM184BQ9ULE4 1060 aa19.38■□□□□ 0.69
CDC42EP3-201ENST00000295324 CEP170BQ9Y4F5 1589 aaPredicted RBP19.38■□□□□ 0.69
CDC42EP3-201ENST00000295324 WDR19Q8NEZ3 1342 aa19.38■□□□□ 0.69
CDC42EP3-201ENST00000295324 PIK3C2BO00750 1634 aa19.38■□□□□ 0.69
CDC42EP3-201ENST00000295324 FKBP3Q00688 224 aaKnown RBP19.37■□□□□ 0.69
CDC42EP3-201ENST00000295324 DAAM2Q86T65 1068 aa19.37■□□□□ 0.69
CDC42EP3-201ENST00000295324 TCP11Q8WWU5 503 aa19.37■□□□□ 0.69
CDC42EP3-201ENST00000295324 DISC1Q9NRI5 854 aa19.37■□□□□ 0.69
CDC42EP3-201ENST00000295324 NSFP46459 744 aaKnown RBP19.37■□□□□ 0.69
CDC42EP3-201ENST00000295324 MXRA7P84157 204 aa19.37■□□□□ 0.69
CDC42EP3-201ENST00000295324 SURF1Q15526 300 aa19.37■□□□□ 0.69
CDC42EP3-201ENST00000295324 CCDC105Q8IYK2 499 aa19.37■□□□□ 0.69
CDC42EP3-201ENST00000295324 GPATCH11Q8N954 259 aa19.37■□□□□ 0.69
CDC42EP3-201ENST00000295324 RNF8O76064 485 aa19.37■□□□□ 0.69
CDC42EP3-201ENST00000295324 ITPK1Q13572 414 aa19.37■□□□□ 0.69
CDC42EP3-201ENST00000295324 CCDC89Q8N998 374 aa19.37■□□□□ 0.69
CDC42EP3-201ENST00000295324 RAB20Q9NX57 234 aa19.37■□□□□ 0.69
CDC42EP3-201ENST00000295324 HACL1Q9UJ83 578 aa19.37■□□□□ 0.69
CDC42EP3-201ENST00000295324 MTMR1Q13613 665 aa19.37■□□□□ 0.69
CDC42EP3-201ENST00000295324 LINC00301Q8NCQ3 95 aa19.37■□□□□ 0.69
CDC42EP3-201ENST00000295324 TBC1D31Q96DN5 1066 aa19.37■□□□□ 0.69
CDC42EP3-201ENST00000295324 TBC1D22BQ9NU19 505 aa19.37■□□□□ 0.69
CDC42EP3-201ENST00000295324 PLA2G4BP0C869 781 aa19.36■□□□□ 0.69
CDC42EP3-201ENST00000295324 FBF1Q8TES7 1133 aa19.36■□□□□ 0.69
CDC42EP3-201ENST00000295324 SNX25Q9H3E2 840 aa19.36■□□□□ 0.69
CDC42EP3-201ENST00000295324 FANCLQ9NW38 375 aa19.36■□□□□ 0.69
CDC42EP3-201ENST00000295324 KRT222Q8N1A0 295 aa19.36■□□□□ 0.69
CDC42EP3-201ENST00000295324 GSDMBQ8TAX9 411 aa19.36■□□□□ 0.69
CDC42EP3-201ENST00000295324 NKIRAS1Q9NYS0 192 aa19.36■□□□□ 0.69
CDC42EP3-201ENST00000295324 MYL3P08590 195 aa19.36■□□□□ 0.69
CDC42EP3-201ENST00000295324 ITIH3Q06033 890 aa19.36■□□□□ 0.69
CDC42EP3-201ENST00000295324 LONRF3Q496Y0 759 aa19.36■□□□□ 0.69
CDC42EP3-201ENST00000295324 IFT20Q8IY31 132 aa19.36■□□□□ 0.69
CDC42EP3-201ENST00000295324 NEDD1Q8NHV4 660 aa19.36■□□□□ 0.69
CDC42EP3-201ENST00000295324 P2RX5Q93086 422 aa19.36■□□□□ 0.69
CDC42EP3-201ENST00000295324 CNOT6LQ96LI5 555 aaKnown RBP19.36■□□□□ 0.69
CDC42EP3-201ENST00000295324 CCDC94Q9BW85 323 aaPredicted RBP19.36■□□□□ 0.69
CDC42EP3-201ENST00000295324 SRPRBQ9Y5M8 271 aaKnown RBP19.36■□□□□ 0.69
CDC42EP3-201ENST00000295324 ZC3H13Q5T200 1668 aaKnown RBP19.36■□□□□ 0.69
CDC42EP3-201ENST00000295324 USP17L15C9J2P7 530 aa19.36■□□□□ 0.69
CDC42EP3-201ENST00000295324 USP17L13C9JLJ4 530 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms